RNA–Protein interactions for RNA: ENST00000561187.1

SNRPA1-215, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-215ENST00000561187 TCAPO15273 167 aa16.64■□□□□ 0.25
SNRPA1-215ENST00000561187 LINC00862A6NCI5 91 aa16.63■□□□□ 0.25
SNRPA1-215ENST00000561187 NPYP01303 97 aa16.63■□□□□ 0.25
SNRPA1-215ENST00000561187 FAM104AQ969W3 186 aa16.63■□□□□ 0.25
SNRPA1-215ENST00000561187 C1orf137Q5JT78 98 aa16.62■□□□□ 0.25
SNRPA1-215ENST00000561187 TRBV24-1A0A075B6N3 115 aa16.61■□□□□ 0.25
SNRPA1-215ENST00000561187 A0A1B0GVG6 124 aa16.61■□□□□ 0.25
SNRPA1-215ENST00000561187 IFITM10A6NMD0 228 aa16.61■□□□□ 0.25
SNRPA1-215ENST00000561187 HBBP68871 147 aa16.6■□□□□ 0.25
SNRPA1-215ENST00000561187 OR10D4PQ8NGN7 298 aa16.6■□□□□ 0.25
SNRPA1-215ENST00000561187 A0A1B0GW15 77 aa16.59■□□□□ 0.25
SNRPA1-215ENST00000561187 RPL32P62910 135 aaKnown RBP16.59■□□□□ 0.25
SNRPA1-215ENST00000561187 C10orf25Q5T742 122 aa16.59■□□□□ 0.25
SNRPA1-215ENST00000561187 SPANXA1Q9NS26 97 aa16.59■□□□□ 0.25
SNRPA1-215ENST00000561187 FAM168BA1KXE4 195 aa16.58■□□□□ 0.24
SNRPA1-215ENST00000561187 IGHV3OR16-9A0A0B4J2B5 98 aa16.57■□□□□ 0.24
SNRPA1-215ENST00000561187 PEA15Q15121 130 aa16.57■□□□□ 0.24
SNRPA1-215ENST00000561187 A0A1B0GXF2 115 aa16.56■□□□□ 0.24
SNRPA1-215ENST00000561187 F8W036 122 aa16.56■□□□□ 0.24
SNRPA1-215ENST00000561187 NDUFA1O15239 70 aa16.56■□□□□ 0.24
SNRPA1-215ENST00000561187 MRPL35Q9NZE8 188 aaKnown RBP16.56■□□□□ 0.24
SNRPA1-215ENST00000561187 UNQ6190/PRO20217Q6UXQ8 127 aa16.55■□□□□ 0.24
SNRPA1-215ENST00000561187 FAM19A5Q7Z5A7 132 aaPredicted RBP16.55■□□□□ 0.24
SNRPA1-215ENST00000561187 S100A8P05109 93 aa16.54■□□□□ 0.24
SNRPA1-215ENST00000561187 MRPS36P82909 103 aaKnown RBP16.54■□□□□ 0.24
SNRPA1-215ENST00000561187 RNF151Q2KHN1 245 aa16.54■□□□□ 0.24
SNRPA1-215ENST00000561187 GAGE2EQ4V326 116 aa16.54■□□□□ 0.24
SNRPA1-215ENST00000561187 C6orf48Q9UBA6 75 aa16.54■□□□□ 0.24
SNRPA1-215ENST00000561187 GAGE2DQ9UEU5 116 aa16.54■□□□□ 0.24
SNRPA1-215ENST00000561187 KRTAP11-1Q8IUC1 163 aa16.52■□□□□ 0.24
SNRPA1-215ENST00000561187 IMMP2LQ96T52 175 aa16.52■□□□□ 0.24
SNRPA1-215ENST00000561187 A0A087WZ39 114 aa16.51■□□□□ 0.23
SNRPA1-215ENST00000561187 TGIF2-C20orf24A0A0A6YYL0 155 aa16.51■□□□□ 0.23
SNRPA1-215ENST00000561187 RAB5AP20339 215 aa16.5■□□□□ 0.23
SNRPA1-215ENST00000561187 IFI27P40305 119 aaPredicted RBP16.5■□□□□ 0.23
SNRPA1-215ENST00000561187 LCE2DQ5TA82 110 aaPredicted RBP16.5■□□□□ 0.23
SNRPA1-215ENST00000561187 ORMDL3Q8N138 153 aa16.5■□□□□ 0.23
SNRPA1-215ENST00000561187 PRELID3AQ96N28 172 aa16.49■□□□□ 0.23
SNRPA1-215ENST00000561187 LOC389332A0A1B0GUA5 103 aa16.48■□□□□ 0.23
SNRPA1-215ENST00000561187 PPBPP02775 128 aa16.48■□□□□ 0.23
SNRPA1-215ENST00000561187 TMEM136Q6ZRR5 245 aa16.48■□□□□ 0.23
SNRPA1-215ENST00000561187 IGLV4-3A0A075B6K6 122 aa16.47■□□□□ 0.23
SNRPA1-215ENST00000561187 IGLV7-43P04211 117 aa16.47■□□□□ 0.23
SNRPA1-215ENST00000561187 LPAP08519 4548 aa16.46■□□□□ 0.23
SNRPA1-215ENST00000561187 C2orf82Q6UX34 121 aa16.46■□□□□ 0.23
SNRPA1-215ENST00000561187 PRR26Q8N8Z3 221 aa16.46■□□□□ 0.23
SNRPA1-215ENST00000561187 SMDT1Q9H4I9 107 aa16.46■□□□□ 0.23
SNRPA1-215ENST00000561187 F8WDY8 70 aa16.45■□□□□ 0.22
SNRPA1-215ENST00000561187 LINC00242Q5T6M2 205 aa16.45■□□□□ 0.22
SNRPA1-215ENST00000561187 ZC2HC1BQ5TFG8 222 aa16.45■□□□□ 0.22
SNRPA1-215ENST00000561187 TLX1NBP0CAT3 122 aa16.43■□□□□ 0.22
SNRPA1-215ENST00000561187 KIAA0087Q14695 138 aa16.43■□□□□ 0.22
SNRPA1-215ENST00000561187 DIRC1Q969H9 104 aa16.43■□□□□ 0.22
SNRPA1-215ENST00000561187 TMEM141Q96I45 108 aa16.43■□□□□ 0.22
SNRPA1-215ENST00000561187 M0QXV9 152 aa16.42■□□□□ 0.22
SNRPA1-215ENST00000561187 ATP5L2Q7Z4Y8 100 aa16.42■□□□□ 0.22
SNRPA1-215ENST00000561187 KRTAP7-1Q8IUC3 87 aa16.42■□□□□ 0.22
SNRPA1-215ENST00000561187 UBE2BP63146 152 aa16.41■□□□□ 0.22
SNRPA1-215ENST00000561187 TEX43Q6ZNM6 134 aa16.4■□□□□ 0.22
SNRPA1-215ENST00000561187 H0Y9J4 135 aa16.39■□□□□ 0.21
SNRPA1-215ENST00000561187 MAP1LC3AQ9H492 121 aa16.39■□□□□ 0.21
SNRPA1-215ENST00000561187 PYGO1Q9Y3Y4 419 aa16.39■□□□□ 0.21
SNRPA1-215ENST00000561187 UBE2D1P51668 147 aa16.38■□□□□ 0.21
SNRPA1-215ENST00000561187 PACRGQ96M98 296 aaPredicted RBP16.37■□□□□ 0.21
SNRPA1-215ENST00000561187 C2orf88Q9BSF0 95 aa16.37■□□□□ 0.21
SNRPA1-215ENST00000561187 TOMM7Q9P0U1 55 aa16.37■□□□□ 0.21
SNRPA1-215ENST00000561187 TRBV30A0A0K0K1B3 111 aa16.36■□□□□ 0.21
SNRPA1-215ENST00000561187 C9orf129Q5T035 196 aaKnown RBP16.36■□□□□ 0.21
SNRPA1-215ENST00000561187 C2orf66Q6UXQ4 117 aa16.36■□□□□ 0.21
SNRPA1-215ENST00000561187 LINC00173Q6ZV60 143 aa16.35■□□□□ 0.21
SNRPA1-215ENST00000561187 CYSLTR1Q9Y271 337 aa16.35■□□□□ 0.21
SNRPA1-215ENST00000561187 NDUFC2-KCTD14E9PQ53 114 aa16.34■□□□□ 0.21
SNRPA1-215ENST00000561187 Q6ZN92 141 aa16.34■□□□□ 0.21
SNRPA1-215ENST00000561187 LINC00469Q8N7U9 141 aa16.33■□□□□ 0.2
SNRPA1-215ENST00000561187 Q8N8P6 123 aa16.32■□□□□ 0.2
SNRPA1-215ENST00000561187 PRSS2P07478 247 aa16.31■□□□□ 0.2
SNRPA1-215ENST00000561187 LAMTOR2Q9Y2Q5 125 aa16.31■□□□□ 0.2
SNRPA1-215ENST00000561187 VCX2Q9H322 139 aa16.3■□□□□ 0.2
SNRPA1-215ENST00000561187 PRSS47A8MTI9 375 aa16.29■□□□□ 0.2
SNRPA1-215ENST00000561187 KRTAP1-4P0C5Y4 121 aa16.29■□□□□ 0.2
SNRPA1-215ENST00000561187 CKS1BP61024 79 aa16.28■□□□□ 0.2
SNRPA1-215ENST00000561187 AMELXQ99217 191 aa16.28■□□□□ 0.2
SNRPA1-215ENST00000561187 XAGE1AQ9HD64 81 aa16.27■□□□□ 0.2
SNRPA1-215ENST00000561187 MT-ND4LP03901 98 aa16.26■□□□□ 0.19
SNRPA1-215ENST00000561187 ORMDL2Q53FV1 153 aa16.26■□□□□ 0.19
SNRPA1-215ENST00000561187 C6orf226Q5I0X4 101 aa16.25■□□□□ 0.19
SNRPA1-215ENST00000561187 LINC01561Q8N1V8 128 aa16.25■□□□□ 0.19
SNRPA1-215ENST00000561187 IGLV1-50A0A075B6I6 118 aa16.24■□□□□ 0.19
SNRPA1-215ENST00000561187 PNRC1Q12796 327 aaPredicted RBP16.24■□□□□ 0.19
SNRPA1-215ENST00000561187 ANAPC16Q96DE5 110 aa16.24■□□□□ 0.19
SNRPA1-215ENST00000561187 ALKBH7Q9BT30 221 aaPredicted RBP16.24■□□□□ 0.19
SNRPA1-215ENST00000561187 IGIPA6NJ69 53 aa16.23■□□□□ 0.19
SNRPA1-215ENST00000561187 Q8IZM0 81 aa16.22■□□□□ 0.19
SNRPA1-215ENST00000561187 CTDSP1Q9GZU7 261 aa16.22■□□□□ 0.19
SNRPA1-215ENST00000561187 CDKN2A-AS1Q9UH64 79 aa16.22■□□□□ 0.19
SNRPA1-215ENST00000561187 KIAA1644Q3SXP7 199 aa16.2■□□□□ 0.18
SNRPA1-215ENST00000561187 C22orf24Q9Y442 160 aa16.2■□□□□ 0.18
SNRPA1-215ENST00000561187 GEMIN7Q9H840 131 aaKnown RBP16.19■□□□□ 0.18
SNRPA1-215ENST00000561187 NXT2Q9NPJ8 142 aaKnown RBP16.19■□□□□ 0.18
SNRPA1-215ENST00000561187 HERVK_113P63121 156 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 92.8 ms