RNA–Protein interactions for RNA: ENST00000561026.5

SNX1-213, Transcript of sorting nexin 1, humanhuman

TSL 1 (best) BASIC

Gene SNX1, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-213ENST00000561026 KRTAP10-8P60410 259 aa10.02□□□□□ -0.8
SNX1-213ENST00000561026 SPAG11BQ08648 103 aa10.02□□□□□ -0.8
SNX1-213ENST00000561026 MRPL54Q6P161 138 aaKnown RBP10.02□□□□□ -0.8
SNX1-213ENST00000561026 SPANXA1Q9NS26 97 aa10.02□□□□□ -0.8
SNX1-213ENST00000561026 IGHV3OR16-9A0A0B4J2B5 98 aa10.01□□□□□ -0.81
SNX1-213ENST00000561026 NPYP01303 97 aa10.01□□□□□ -0.81
SNX1-213ENST00000561026 RNF151Q2KHN1 245 aa10.01□□□□□ -0.81
SNX1-213ENST00000561026 C9orf116Q5BN46 136 aaPredicted RBP10.01□□□□□ -0.81
SNX1-213ENST00000561026 OR10D4PQ8NGN7 298 aa10.01□□□□□ -0.81
SNX1-213ENST00000561026 OPRPNQ99935 248 aaPredicted RBP10.01□□□□□ -0.81
SNX1-213ENST00000561026 LRP2P98164 4655 aa10.01□□□□□ -0.81
SNX1-213ENST00000561026 PPBPP02775 128 aa10.01□□□□□ -0.81
SNX1-213ENST00000561026 MRPS36P82909 103 aaKnown RBP10.01□□□□□ -0.81
SNX1-213ENST00000561026 RPL18AQ02543 176 aaKnown RBP10.01□□□□□ -0.81
SNX1-213ENST00000561026 ODF1Q14990 250 aa10□□□□□ -0.81
SNX1-213ENST00000561026 F8WDY8 70 aa9.99□□□□□ -0.81
SNX1-213ENST00000561026 ORAOV1Q8WV07 137 aa9.99□□□□□ -0.81
SNX1-213ENST00000561026 MRPL35Q9NZE8 188 aaKnown RBP9.99□□□□□ -0.81
SNX1-213ENST00000561026 IFITM10A6NMD0 228 aa9.98□□□□□ -0.81
SNX1-213ENST00000561026 PSORS1C2Q9UIG4 136 aa9.98□□□□□ -0.81
SNX1-213ENST00000561026 RAB5AP20339 215 aa9.97□□□□□ -0.81
SNX1-213ENST00000561026 TMEM136Q6ZRR5 245 aa9.97□□□□□ -0.81
SNX1-213ENST00000561026 ATP5L2Q7Z4Y8 100 aa9.97□□□□□ -0.81
SNX1-213ENST00000561026 ORMDL3Q8N138 153 aa9.97□□□□□ -0.81
SNX1-213ENST00000561026 IMMP2LQ96T52 175 aa9.97□□□□□ -0.81
SNX1-213ENST00000561026 NDUFA1O15239 70 aa9.96□□□□□ -0.82
SNX1-213ENST00000561026 MT-ND6P03923 174 aa9.96□□□□□ -0.82
SNX1-213ENST00000561026 PHF5AQ7RTV0 110 aaKnown RBP9.96□□□□□ -0.82
SNX1-213ENST00000561026 C10orf25Q5T742 122 aa9.95□□□□□ -0.82
SNX1-213ENST00000561026 PRELID3AQ96N28 172 aa9.95□□□□□ -0.82
SNX1-213ENST00000561026 PYGO1Q9Y3Y4 419 aa9.95□□□□□ -0.82
SNX1-213ENST00000561026 IFI27P40305 119 aaPredicted RBP9.94□□□□□ -0.82
SNX1-213ENST00000561026 UNQ6190/PRO20217Q6UXQ8 127 aa9.94□□□□□ -0.82
SNX1-213ENST00000561026 A0A087WZ39 114 aa9.93□□□□□ -0.82
SNX1-213ENST00000561026 TGIF2-C20orf24A0A0A6YYL0 155 aa9.93□□□□□ -0.82
SNX1-213ENST00000561026 PRSS47A8MTI9 375 aa9.93□□□□□ -0.82
SNX1-213ENST00000561026 TLX1NBP0CAT3 122 aa9.93□□□□□ -0.82
SNX1-213ENST00000561026 C1orf137Q5JT78 98 aa9.93□□□□□ -0.82
SNX1-213ENST00000561026 C6orf48Q9UBA6 75 aa9.93□□□□□ -0.82
SNX1-213ENST00000561026 KIAA0087Q14695 138 aa9.92□□□□□ -0.82
SNX1-213ENST00000561026 LINC00242Q5T6M2 205 aa9.92□□□□□ -0.82
SNX1-213ENST00000561026 RNF213Q63HN8 5207 aa9.92□□□□□ -0.82
SNX1-213ENST00000561026 IGLV4-3A0A075B6K6 122 aa9.91□□□□□ -0.82
SNX1-213ENST00000561026 FAM168BA1KXE4 195 aa9.91□□□□□ -0.82
SNX1-213ENST00000561026 TMEM141Q96I45 108 aa9.91□□□□□ -0.82
SNX1-213ENST00000561026 LAMTOR2Q9Y2Q5 125 aa9.91□□□□□ -0.82
SNX1-213ENST00000561026 LOC389332A0A1B0GUA5 103 aa9.89□□□□□ -0.83
SNX1-213ENST00000561026 GAGE2EQ4V326 116 aa9.89□□□□□ -0.83
SNX1-213ENST00000561026 GAGE2DQ9UEU5 116 aa9.89□□□□□ -0.83
SNX1-213ENST00000561026 IGLV7-43P04211 117 aa9.88□□□□□ -0.83
SNX1-213ENST00000561026 PNRC1Q12796 327 aaPredicted RBP9.88□□□□□ -0.83
SNX1-213ENST00000561026 TEX43Q6ZNM6 134 aa9.88□□□□□ -0.83
SNX1-213ENST00000561026 KRTAP11-1Q8IUC1 163 aa9.88□□□□□ -0.83
SNX1-213ENST00000561026 MAP1LC3AQ9H492 121 aa9.88□□□□□ -0.83
SNX1-213ENST00000561026 MT-ND4LP03901 98 aa9.88□□□□□ -0.83
SNX1-213ENST00000561026 UBE2D1P51668 147 aa9.88□□□□□ -0.83
SNX1-213ENST00000561026 FAM19A5Q7Z5A7 132 aaPredicted RBP9.88□□□□□ -0.83
SNX1-213ENST00000561026 Q8N8P6 123 aa9.88□□□□□ -0.83
SNX1-213ENST00000561026 DIRC1Q969H9 104 aa9.88□□□□□ -0.83
SNX1-213ENST00000561026 ANAPC16Q96DE5 110 aa9.88□□□□□ -0.83
SNX1-213ENST00000561026 TRBV30A0A0K0K1B3 111 aa9.87□□□□□ -0.83
SNX1-213ENST00000561026 C2orf82Q6UX34 121 aa9.87□□□□□ -0.83
SNX1-213ENST00000561026 C2orf66Q6UXQ4 117 aa9.87□□□□□ -0.83
SNX1-213ENST00000561026 KRTAP7-1Q8IUC3 87 aa9.87□□□□□ -0.83
SNX1-213ENST00000561026 LINC01561Q8N1V8 128 aa9.87□□□□□ -0.83
SNX1-213ENST00000561026 CYSLTR1Q9Y271 337 aa9.87□□□□□ -0.83
SNX1-213ENST00000561026 C2orf88Q9BSF0 95 aa9.86□□□□□ -0.83
SNX1-213ENST00000561026 VCX2Q9H322 139 aa9.86□□□□□ -0.83
SNX1-213ENST00000561026 NDUFC2-KCTD14E9PQ53 114 aa9.85□□□□□ -0.83
SNX1-213ENST00000561026 ZC2HC1BQ5TFG8 222 aa9.85□□□□□ -0.83
SNX1-213ENST00000561026 Q6ZN92 141 aa9.85□□□□□ -0.83
SNX1-213ENST00000561026 LINC00173Q6ZV60 143 aa9.85□□□□□ -0.83
SNX1-213ENST00000561026 AMELXQ99217 191 aa9.85□□□□□ -0.83
SNX1-213ENST00000561026 K7EMI3 77 aa9.84□□□□□ -0.83
SNX1-213ENST00000561026 ORMDL2Q53FV1 153 aa9.84□□□□□ -0.83
SNX1-213ENST00000561026 PACRGQ96M98 296 aaPredicted RBP9.84□□□□□ -0.83
SNX1-213ENST00000561026 IGIPA6NJ69 53 aa9.83□□□□□ -0.84
SNX1-213ENST00000561026 H0Y9J4 135 aa9.83□□□□□ -0.84
SNX1-213ENST00000561026 M0QXV9 152 aa9.83□□□□□ -0.84
SNX1-213ENST00000561026 NPSP0C0P6 89 aa9.83□□□□□ -0.84
SNX1-213ENST00000561026 C9orf129Q5T035 196 aaKnown RBP9.83□□□□□ -0.84
SNX1-213ENST00000561026 PRR26Q8N8Z3 221 aa9.82□□□□□ -0.84
SNX1-213ENST00000561026 PRSS2P07478 247 aa9.81□□□□□ -0.84
SNX1-213ENST00000561026 RAB14P61106 215 aa9.81□□□□□ -0.84
SNX1-213ENST00000561026 UBE2BP63146 152 aa9.81□□□□□ -0.84
SNX1-213ENST00000561026 FAM19A3Q7Z5A8 133 aa9.81□□□□□ -0.84
SNX1-213ENST00000561026 NXT2Q9NPJ8 142 aaKnown RBP9.81□□□□□ -0.84
SNX1-213ENST00000561026 CKS1BP61024 79 aa9.8□□□□□ -0.84
SNX1-213ENST00000561026 CTDSP1Q9GZU7 261 aa9.8□□□□□ -0.84
SNX1-213ENST00000561026 C6orf226Q5I0X4 101 aa9.79□□□□□ -0.84
SNX1-213ENST00000561026 Q8IZM0 81 aa9.79□□□□□ -0.84
SNX1-213ENST00000561026 TOMM7Q9P0U1 55 aa9.79□□□□□ -0.84
SNX1-213ENST00000561026 G0S2P27469 103 aa9.78□□□□□ -0.84
SNX1-213ENST00000561026 PAPPA-AS1Q5QFB9 102 aa9.78□□□□□ -0.84
SNX1-213ENST00000561026 ALKBH7Q9BT30 221 aaPredicted RBP9.78□□□□□ -0.84
SNX1-213ENST00000561026 KRTAP1-4P0C5Y4 121 aa9.77□□□□□ -0.84
SNX1-213ENST00000561026 HERVK_113P63121 156 aa9.77□□□□□ -0.84
SNX1-213ENST00000561026 SEC11AP67812 179 aa9.77□□□□□ -0.84
SNX1-213ENST00000561026 CDKN2A-AS1Q9UH64 79 aa9.77□□□□□ -0.84
SNX1-213ENST00000561026 IGLV1-50A0A075B6I6 118 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 116.5 ms