RNA–Protein interactions for RNA: ENST00000560970.5

TPM1-227, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,039 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-227ENST00000560970 SCGB1D1O95968 90 aa7.02□□□□□ -1.29
TPM1-227ENST00000560970 HBDP02042 147 aa7.02□□□□□ -1.29
TPM1-227ENST00000560970 KRTDAPP60985 99 aa7.02□□□□□ -1.29
TPM1-227ENST00000560970 RPL32P62910 135 aaKnown RBP7.02□□□□□ -1.29
TPM1-227ENST00000560970 LINC00269Q8N2A0 174 aa7.02□□□□□ -1.29
TPM1-227ENST00000560970 PRR34Q9NV39 138 aa7.02□□□□□ -1.29
TPM1-227ENST00000560970 TRBV27A0A0K0K1C4 114 aa7.01□□□□□ -1.29
TPM1-227ENST00000560970 UBE2L6O14933 153 aa7.01□□□□□ -1.29
TPM1-227ENST00000560970 CRPP02741 224 aa7.01□□□□□ -1.29
TPM1-227ENST00000560970 C3orf79P0CE67 100 aa7.01□□□□□ -1.29
TPM1-227ENST00000560970 S100A12P80511 92 aa7.01□□□□□ -1.29
TPM1-227ENST00000560970 LINC01620Q4KN68 170 aa7.01□□□□□ -1.29
TPM1-227ENST00000560970 KRTAP26-1Q6PEX3 210 aa7.01□□□□□ -1.29
TPM1-227ENST00000560970 BAALCQ8WXS3 180 aa7.01□□□□□ -1.29
TPM1-227ENST00000560970 SMIM2Q9BVW6 85 aa7.01□□□□□ -1.29
TPM1-227ENST00000560970 A0A1B0GUV1 79 aa7□□□□□ -1.29
TPM1-227ENST00000560970 C20orf202A1L168 122 aa7□□□□□ -1.29
TPM1-227ENST00000560970 KRTAP10-4P60372 401 aaPredicted RBP7□□□□□ -1.29
TPM1-227ENST00000560970 SUMO2P61956 95 aaKnown RBP7□□□□□ -1.29
TPM1-227ENST00000560970 PMCHL1Q16048 86 aa7□□□□□ -1.29
TPM1-227ENST00000560970 SERTAD4-AS1Q5TG53 156 aa7□□□□□ -1.29
TPM1-227ENST00000560970 CHAC1Q9BUX1 264 aa7□□□□□ -1.29
TPM1-227ENST00000560970 MAP1LC3CQ9BXW4 147 aa7□□□□□ -1.29
TPM1-227ENST00000560970 A0A096LNJ9 63 aa6.99□□□□□ -1.29
TPM1-227ENST00000560970 FCER1GP30273 86 aa6.99□□□□□ -1.29
TPM1-227ENST00000560970 REG3AQ06141 175 aa6.99□□□□□ -1.29
TPM1-227ENST00000560970 MIAQ16674 131 aa6.99□□□□□ -1.29
TPM1-227ENST00000560970 TEX43Q6ZNM6 134 aa6.99□□□□□ -1.29
TPM1-227ENST00000560970 C1orf43Q9BWL3 253 aa6.99□□□□□ -1.29
TPM1-227ENST00000560970 IGLV10-54A0A075B6I4 117 aa6.98□□□□□ -1.29
TPM1-227ENST00000560970 SYS1-DBNDD2H3BUS1 97 aa6.98□□□□□ -1.29
TPM1-227ENST00000560970 FGF6P10767 208 aa6.98□□□□□ -1.29
TPM1-227ENST00000560970 ORMDL2Q53FV1 153 aa6.98□□□□□ -1.29
TPM1-227ENST00000560970 PET117Q6UWS5 81 aa6.98□□□□□ -1.29
TPM1-227ENST00000560970 CIRBP-AS1Q8TBR5 109 aa6.98□□□□□ -1.29
TPM1-227ENST00000560970 LINC01549A6NIU2 74 aa6.97□□□□□ -1.29
TPM1-227ENST00000560970 H7C423 109 aa6.97□□□□□ -1.29
TPM1-227ENST00000560970 VCYO14598 125 aa6.97□□□□□ -1.29
TPM1-227ENST00000560970 TCAPO15273 167 aa6.97□□□□□ -1.29
TPM1-227ENST00000560970 OXTP01178 125 aa6.97□□□□□ -1.29
TPM1-227ENST00000560970 G0S2P27469 103 aa6.97□□□□□ -1.29
TPM1-227ENST00000560970 C14orf177Q52M58 125 aa6.97□□□□□ -1.29
TPM1-227ENST00000560970 AMMECR1LQ6DCA0 310 aa6.97□□□□□ -1.29
TPM1-227ENST00000560970 IGKV3OR2-268A0A0C4DH90 116 aa6.96□□□□□ -1.3
TPM1-227ENST00000560970 TSTD3H0UI37 97 aa6.96□□□□□ -1.3
TPM1-227ENST00000560970 ATP5LO75964 103 aa6.96□□□□□ -1.3
TPM1-227ENST00000560970 LINC00173Q6ZV60 143 aa6.96□□□□□ -1.3
TPM1-227ENST00000560970 VAMP8Q9BV40 100 aa6.96□□□□□ -1.3
TPM1-227ENST00000560970 USP17L23D6RBM5 183 aa6.95□□□□□ -1.3
TPM1-227ENST00000560970 ZNF25P17030 456 aaPredicted RBP6.95□□□□□ -1.3
TPM1-227ENST00000560970 MRPL52Q86TS9 123 aaKnown RBP6.95□□□□□ -1.3
TPM1-227ENST00000560970 IFI27L1Q96BM0 104 aa6.95□□□□□ -1.3
TPM1-227ENST00000560970 KIR2DL4Q99706 377 aa6.95□□□□□ -1.3
TPM1-227ENST00000560970 PLA2G2DQ9UNK4 145 aa6.95□□□□□ -1.3
TPM1-227ENST00000560970 PCP4L1A6NKN8 68 aa6.94□□□□□ -1.3
TPM1-227ENST00000560970 RPL37AP61513 92 aaKnown RBP6.94□□□□□ -1.3
TPM1-227ENST00000560970 RPL39P62891 51 aaKnown RBP6.94□□□□□ -1.3
TPM1-227ENST00000560970 LINC01545Q5VT33 79 aa6.94□□□□□ -1.3
TPM1-227ENST00000560970 UBE2D4Q9Y2X8 147 aa6.94□□□□□ -1.3
TPM1-227ENST00000560970 TRAV8-4A0A0B4J246 113 aa6.93□□□□□ -1.3
TPM1-227ENST00000560970 RNASE13Q5GAN3 156 aaKnown RBP6.93□□□□□ -1.3
TPM1-227ENST00000560970 Q6ZUT4 128 aa6.93□□□□□ -1.3
TPM1-227ENST00000560970 ZNF664Q8N3J9 261 aa6.93□□□□□ -1.3
TPM1-227ENST00000560970 OR5A1Q8NGJ0 315 aa6.93□□□□□ -1.3
TPM1-227ENST00000560970 TOMM6Q96B49 74 aa6.93□□□□□ -1.3
TPM1-227ENST00000560970 CDC42SE2Q9NRR3 84 aa6.93□□□□□ -1.3
TPM1-227ENST00000560970 UBR4Q5T4S7 5183 aa6.93□□□□□ -1.3
TPM1-227ENST00000560970 GAGE12HA6NDE8 117 aa6.92□□□□□ -1.3
TPM1-227ENST00000560970 PRSS1P07477 247 aa6.92□□□□□ -1.3
TPM1-227ENST00000560970 FAM104AQ969W3 186 aa6.92□□□□□ -1.3
TPM1-227ENST00000560970 TMEM101Q96IK0 257 aa6.92□□□□□ -1.3
TPM1-227ENST00000560970 LINC00959A0A1B0GUT2 108 aa6.91□□□□□ -1.3
TPM1-227ENST00000560970 FOXI1Q12951 378 aa6.91□□□□□ -1.3
TPM1-227ENST00000560970 C2orf66Q6UXQ4 117 aa6.91□□□□□ -1.3
TPM1-227ENST00000560970 C15orf56Q8N910 161 aa6.91□□□□□ -1.3
TPM1-227ENST00000560970 CHCHD10Q8WYQ3 142 aaPredicted RBP6.91□□□□□ -1.3
TPM1-227ENST00000560970 CYSLTR1Q9Y271 337 aa6.91□□□□□ -1.3
TPM1-227ENST00000560970 HSBP1L1C9JCN9 74 aa6.9□□□□□ -1.3
TPM1-227ENST00000560970 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.9□□□□□ -1.3
TPM1-227ENST00000560970 CCL25O15444 150 aa6.9□□□□□ -1.3
TPM1-227ENST00000560970 SPATA45Q537H7 98 aa6.9□□□□□ -1.3
TPM1-227ENST00000560970 ERASQ7Z444 233 aa6.9□□□□□ -1.3
TPM1-227ENST00000560970 SCGB3A1Q96QR1 104 aa6.9□□□□□ -1.3
TPM1-227ENST00000560970 TIMM21Q9BVV7 248 aa6.9□□□□□ -1.3
TPM1-227ENST00000560970 PRO1933Q9H354 126 aa6.9□□□□□ -1.3
TPM1-227ENST00000560970 PAM16Q9Y3D7 125 aa6.9□□□□□ -1.3
TPM1-227ENST00000560970 CSDC2Q9Y534 153 aaKnown RBP6.9□□□□□ -1.3
TPM1-227ENST00000560970 TRAV12-1A0A0B4J245 112 aa6.89□□□□□ -1.31
TPM1-227ENST00000560970 H0Y8G0 127 aa6.89□□□□□ -1.31
TPM1-227ENST00000560970 DDTP30046 118 aa6.89□□□□□ -1.31
TPM1-227ENST00000560970 XCL1P47992 114 aa6.89□□□□□ -1.31
TPM1-227ENST00000560970 HNRNPA3P51991 378 aaKnown RBP6.89□□□□□ -1.31
TPM1-227ENST00000560970 Q6ZN92 141 aa6.89□□□□□ -1.31
TPM1-227ENST00000560970 ATOH7Q8N100 152 aa6.89□□□□□ -1.31
TPM1-227ENST00000560970 TMEM141Q96I45 108 aa6.89□□□□□ -1.31
TPM1-227ENST00000560970 TIMM17AQ99595 171 aa6.89□□□□□ -1.31
TPM1-227ENST00000560970 OPRPNQ99935 248 aaPredicted RBP6.89□□□□□ -1.31
TPM1-227ENST00000560970 ODF1Q14990 250 aa6.88□□□□□ -1.31
TPM1-227ENST00000560970 DGAT2L7PQ6IED9 249 aa6.88□□□□□ -1.31
TPM1-227ENST00000560970 SPANXA1Q9NS26 97 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms