RNA–Protein interactions for RNA: ENST00000560897.1

HERC1-210, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-210ENST00000560897 RAB5AP20339 215 aa5.79□□□□□ -1.48
HERC1-210ENST00000560897 RPL13AP40429 203 aaKnown RBP5.79□□□□□ -1.48
HERC1-210ENST00000560897 TMEM97Q5BJF2 176 aa5.79□□□□□ -1.48
HERC1-210ENST00000560897 C1orf137Q5JT78 98 aa5.79□□□□□ -1.48
HERC1-210ENST00000560897 MRAP2Q96G30 205 aa5.79□□□□□ -1.48
HERC1-210ENST00000560897 PPBPP02775 128 aa5.78□□□□□ -1.48
HERC1-210ENST00000560897 S100A6P06703 90 aa5.78□□□□□ -1.48
HERC1-210ENST00000560897 RAB4AP20338 218 aa5.78□□□□□ -1.48
HERC1-210ENST00000560897 PMCHP20382 165 aa5.78□□□□□ -1.48
HERC1-210ENST00000560897 FABP9Q0Z7S8 132 aa5.78□□□□□ -1.48
HERC1-210ENST00000560897 HIGD2BQ4VC39 106 aa5.78□□□□□ -1.48
HERC1-210ENST00000560897 FAM104BQ5XKR9 115 aa5.78□□□□□ -1.48
HERC1-210ENST00000560897 SUMO4Q6EEV6 95 aa5.78□□□□□ -1.48
HERC1-210ENST00000560897 TMEM136Q6ZRR5 245 aa5.78□□□□□ -1.48
HERC1-210ENST00000560897 AMN1Q8IY45 258 aa5.78□□□□□ -1.48
HERC1-210ENST00000560897 ST20Q9HBF5 79 aa5.78□□□□□ -1.48
HERC1-210ENST00000560897 NIT2Q9NQR4 276 aa5.78□□□□□ -1.48
HERC1-210ENST00000560897 TRAPPC1Q9Y5R8 145 aa5.78□□□□□ -1.48
HERC1-210ENST00000560897 TRBV25-1A0A075B6N4 114 aa5.77□□□□□ -1.49
HERC1-210ENST00000560897 KRTAP9-7A8MTY7 169 aa5.77□□□□□ -1.49
HERC1-210ENST00000560897 AKR1D1P51857 326 aa5.77□□□□□ -1.49
HERC1-210ENST00000560897 ORMDL3Q8N138 153 aa5.77□□□□□ -1.49
HERC1-210ENST00000560897 GNB1LQ9BYB4 327 aa5.77□□□□□ -1.49
HERC1-210ENST00000560897 TGIF2-C20orf24A0A0A6YYL0 155 aa5.76□□□□□ -1.49
HERC1-210ENST00000560897 M0QY20 66 aa5.76□□□□□ -1.49
HERC1-210ENST00000560897 FCER1GP30273 86 aa5.76□□□□□ -1.49
HERC1-210ENST00000560897 C15orf56Q8N910 161 aa5.76□□□□□ -1.49
HERC1-210ENST00000560897 TRBV24-1A0A075B6N3 115 aa5.75□□□□□ -1.49
HERC1-210ENST00000560897 A0A1B0GXF2 115 aa5.75□□□□□ -1.49
HERC1-210ENST00000560897 D6R8Y8 96 aa5.75□□□□□ -1.49
HERC1-210ENST00000560897 VCYO14598 125 aa5.75□□□□□ -1.49
HERC1-210ENST00000560897 UBE2L6O14933 153 aa5.75□□□□□ -1.49
HERC1-210ENST00000560897 TSPAN13O95857 204 aa5.75□□□□□ -1.49
HERC1-210ENST00000560897 SNRPEP62304 92 aaKnown RBP5.75□□□□□ -1.49
HERC1-210ENST00000560897 COTL1Q14019 142 aa5.75□□□□□ -1.49
HERC1-210ENST00000560897 MRPL51Q4U2R6 128 aaKnown RBP5.75□□□□□ -1.49
HERC1-210ENST00000560897 GATD1Q8NB37 220 aa5.75□□□□□ -1.49
HERC1-210ENST00000560897 NEXN-AS1Q8NBZ9 246 aa5.75□□□□□ -1.49
HERC1-210ENST00000560897 PRELID3AQ96N28 172 aa5.75□□□□□ -1.49
HERC1-210ENST00000560897 KIR2DL4Q99706 377 aa5.75□□□□□ -1.49
HERC1-210ENST00000560897 H0Y9J4 135 aa5.74□□□□□ -1.49
HERC1-210ENST00000560897 SMKR1H3BMG3 65 aa5.74□□□□□ -1.49
HERC1-210ENST00000560897 TCAPO15273 167 aa5.74□□□□□ -1.49
HERC1-210ENST00000560897 NCR2O95944 276 aa5.74□□□□□ -1.49
HERC1-210ENST00000560897 SMAGPQ0VAQ4 97 aa5.74□□□□□ -1.49
HERC1-210ENST00000560897 C20orf78Q9BR46 151 aa5.74□□□□□ -1.49
HERC1-210ENST00000560897 MAP1LC3AQ9H492 121 aa5.74□□□□□ -1.49
HERC1-210ENST00000560897 LAMTOR2Q9Y2Q5 125 aa5.74□□□□□ -1.49
HERC1-210ENST00000560897 LOC389332A0A1B0GUA5 103 aa5.73□□□□□ -1.49
HERC1-210ENST00000560897 GAGE12HA6NDE8 117 aa5.73□□□□□ -1.49
HERC1-210ENST00000560897 SDHAF1A6NFY7 115 aa5.73□□□□□ -1.49
HERC1-210ENST00000560897 I3L3M4 83 aa5.73□□□□□ -1.49
HERC1-210ENST00000560897 G0S2P27469 103 aa5.73□□□□□ -1.49
HERC1-210ENST00000560897 SUMO2P61956 95 aaKnown RBP5.73□□□□□ -1.49
HERC1-210ENST00000560897 KIAA1644Q3SXP7 199 aa5.73□□□□□ -1.49
HERC1-210ENST00000560897 TMEM18Q96B42 140 aa5.73□□□□□ -1.49
HERC1-210ENST00000560897 RPL39LQ96EH5 51 aaKnown RBP5.73□□□□□ -1.49
HERC1-210ENST00000560897 IGHV1-24A0A0C4DH33 117 aa5.72□□□□□ -1.49
HERC1-210ENST00000560897 IGLV7-43P04211 117 aa5.72□□□□□ -1.49
HERC1-210ENST00000560897 AMTP48728 403 aa5.72□□□□□ -1.49
HERC1-210ENST00000560897 AMMECR1LQ6DCA0 310 aa5.72□□□□□ -1.49
HERC1-210ENST00000560897 CARD19Q96LW7 228 aa5.72□□□□□ -1.49
HERC1-210ENST00000560897 GVQW2A0A096LPI5 108 aaPredicted RBP5.71□□□□□ -1.5
HERC1-210ENST00000560897 TRBV6-5A0A0K0K1A5 114 aa5.71□□□□□ -1.5
HERC1-210ENST00000560897 PCP4L1A6NKN8 68 aa5.71□□□□□ -1.5
HERC1-210ENST00000560897 CRYGAP11844 174 aa5.71□□□□□ -1.5
HERC1-210ENST00000560897 GAGE2BQ13066 116 aa5.71□□□□□ -1.5
HERC1-210ENST00000560897 COA6Q5JTJ3 125 aaKnown RBP5.71□□□□□ -1.5
HERC1-210ENST00000560897 NTM-AS1Q6ZSK4 140 aa5.71□□□□□ -1.5
HERC1-210ENST00000560897 FA2HQ7L5A8 372 aa5.71□□□□□ -1.5
HERC1-210ENST00000560897 C20orf203Q8NBC4 194 aa5.71□□□□□ -1.5
HERC1-210ENST00000560897 TMEM101Q96IK0 257 aa5.71□□□□□ -1.5
HERC1-210ENST00000560897 IGKV3OR2-268A0A0C4DH90 116 aa5.7□□□□□ -1.5
HERC1-210ENST00000560897 S100A2P29034 98 aa5.7□□□□□ -1.5
HERC1-210ENST00000560897 IQCJQ1A5X6 159 aa5.7□□□□□ -1.5
HERC1-210ENST00000560897 BAGE3Q86Y29 109 aa5.7□□□□□ -1.5
HERC1-210ENST00000560897 TMEM243Q9BU79 118 aa5.7□□□□□ -1.5
HERC1-210ENST00000560897 NXT2Q9NPJ8 142 aaKnown RBP5.7□□□□□ -1.5
HERC1-210ENST00000560897 A0A1B0GUV1 79 aa5.69□□□□□ -1.5
HERC1-210ENST00000560897 TRIAP1O43715 76 aa5.69□□□□□ -1.5
HERC1-210ENST00000560897 NPYP01303 97 aa5.69□□□□□ -1.5
HERC1-210ENST00000560897 TRGC2P03986 189 aa5.69□□□□□ -1.5
HERC1-210ENST00000560897 ORMDL2Q53FV1 153 aa5.69□□□□□ -1.5
HERC1-210ENST00000560897 RNASEKQ6P5S7 137 aaKnown RBP5.69□□□□□ -1.5
HERC1-210ENST00000560897 SMIM2Q9BVW6 85 aa5.69□□□□□ -1.5
HERC1-210ENST00000560897 KRTAP4-8Q9BYQ9 185 aa5.69□□□□□ -1.5
HERC1-210ENST00000560897 IGLV4-60A0A075B6I1 120 aa5.68□□□□□ -1.5
HERC1-210ENST00000560897 A0A087WZ39 114 aa5.68□□□□□ -1.5
HERC1-210ENST00000560897 TRBV27A0A0K0K1C4 114 aa5.68□□□□□ -1.5
HERC1-210ENST00000560897 LOC107984640A0A0U1RRK4 108 aa5.68□□□□□ -1.5
HERC1-210ENST00000560897 LINC00587B1AMM8 73 aa5.68□□□□□ -1.5
HERC1-210ENST00000560897 HIST1H2BKO60814 126 aa5.68□□□□□ -1.5
HERC1-210ENST00000560897 HIST1H2BJP06899 126 aa5.68□□□□□ -1.5
HERC1-210ENST00000560897 KRTAP1-4P0C5Y4 121 aa5.68□□□□□ -1.5
HERC1-210ENST00000560897 VPREB1P12018 145 aa5.68□□□□□ -1.5
HERC1-210ENST00000560897 HIST1H2BOP23527 126 aa5.68□□□□□ -1.5
HERC1-210ENST00000560897 HIST1H2BBP33778 126 aa5.68□□□□□ -1.5
HERC1-210ENST00000560897 POLR2KP53803 58 aaKnown RBP5.68□□□□□ -1.5
HERC1-210ENST00000560897 HIST1H2BDP58876 126 aa5.68□□□□□ -1.5
HERC1-210ENST00000560897 HIST1H2BCP62807 126 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms