RNA–Protein interactions for RNA: ENST00000560715.5

TSPAN3-209, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 2,892 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-209ENST00000560715 LINC00315P59091 139 aa4.75□□□□□ -1.65
TSPAN3-209ENST00000560715 C11orf71Q6IPW1 123 aa4.75□□□□□ -1.65
TSPAN3-209ENST00000560715 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.75□□□□□ -1.65
TSPAN3-209ENST00000560715 KIF25-AS1Q9Y6Z4 181 aa4.75□□□□□ -1.65
TSPAN3-209ENST00000560715 IGLV4-3A0A075B6K6 122 aa4.75□□□□□ -1.65
TSPAN3-209ENST00000560715 CCKP06307 115 aa4.75□□□□□ -1.65
TSPAN3-209ENST00000560715 ATP5EP2Q5VTU8 51 aa4.75□□□□□ -1.65
TSPAN3-209ENST00000560715 LINC00474Q9P2X8 69 aa4.75□□□□□ -1.65
TSPAN3-209ENST00000560715 ZFYVE26Q68DK2 2539 aa4.74□□□□□ -1.65
TSPAN3-209ENST00000560715 KLKP1Q107X0 134 aa4.74□□□□□ -1.65
TSPAN3-209ENST00000560715 PRR9Q5T870 116 aa4.74□□□□□ -1.65
TSPAN3-209ENST00000560715 LYPD2Q6UXB3 125 aa4.74□□□□□ -1.65
TSPAN3-209ENST00000560715 LINC01560Q8TB33 94 aa4.74□□□□□ -1.65
TSPAN3-209ENST00000560715 C14orf132Q9NPU4 83 aa4.74□□□□□ -1.65
TSPAN3-209ENST00000560715 SMG1Q96Q15 3661 aaKnown RBP4.74□□□□□ -1.65
TSPAN3-209ENST00000560715 NACAE9PAV3 2078 aa4.74□□□□□ -1.65
TSPAN3-209ENST00000560715 PTPRQQ9UMZ3 2332 aa4.74□□□□□ -1.65
TSPAN3-209ENST00000560715 TRAV23DV6A0A075B6W5 121 aa4.74□□□□□ -1.65
TSPAN3-209ENST00000560715 TRBV7-6A0A0J9YX20 115 aa4.74□□□□□ -1.65
TSPAN3-209ENST00000560715 TRBV6-5A0A0K0K1A5 114 aa4.74□□□□□ -1.65
TSPAN3-209ENST00000560715 PSPHP1O15172 72 aa4.74□□□□□ -1.65
TSPAN3-209ENST00000560715 BCE1O60756 84 aa4.74□□□□□ -1.65
TSPAN3-209ENST00000560715 NKAPP1Q8N9T2 125 aa4.74□□□□□ -1.65
TSPAN3-209ENST00000560715 SND1-IT1Q9HBX3 110 aa4.74□□□□□ -1.65
TSPAN3-209ENST00000560715 ATRXP46100 2492 aa4.74□□□□□ -1.65
TSPAN3-209ENST00000560715 ITPR1Q14643 2758 aa4.74□□□□□ -1.65
TSPAN3-209ENST00000560715 PRRC2AP48634 2157 aaKnown RBP4.73□□□□□ -1.65
TSPAN3-209ENST00000560715 C1orf158Q8N1D5 194 aa4.73□□□□□ -1.65
TSPAN3-209ENST00000560715 Q8NBF4 154 aa4.73□□□□□ -1.65
TSPAN3-209ENST00000560715 LENEPQ9Y5L5 61 aa4.73□□□□□ -1.65
TSPAN3-209ENST00000560715 IGLV11-55A0A075B6I3 123 aa4.73□□□□□ -1.65
TSPAN3-209ENST00000560715 TRAV21A0A0B4J279 112 aa4.73□□□□□ -1.65
TSPAN3-209ENST00000560715 KLLNB2CW77 178 aa4.73□□□□□ -1.65
TSPAN3-209ENST00000560715 SS18Q15532 418 aa4.73□□□□□ -1.65
TSPAN3-209ENST00000560715 S100A7L2Q5SY68 101 aa4.73□□□□□ -1.65
TSPAN3-209ENST00000560715 VMO1Q7Z5L0 202 aa4.73□□□□□ -1.65
TSPAN3-209ENST00000560715 LINC00308Q8TCZ7 52 aa4.73□□□□□ -1.65
TSPAN3-209ENST00000560715 PCNX1Q96RV3 2341 aa4.73□□□□□ -1.65
TSPAN3-209ENST00000560715 TRAV7A0A075B6U4 112 aa4.72□□□□□ -1.65
TSPAN3-209ENST00000560715 IGHV1-3A0A0C4DH29 117 aa4.72□□□□□ -1.65
TSPAN3-209ENST00000560715 IGHV1-8P0DP01 117 aa4.72□□□□□ -1.65
TSPAN3-209ENST00000560715 RNASE4P34096 147 aaKnown RBP4.72□□□□□ -1.65
TSPAN3-209ENST00000560715 ATP5EP56381 51 aaPredicted RBP4.72□□□□□ -1.65
TSPAN3-209ENST00000560715 C9orf129Q5T035 196 aaKnown RBP4.72□□□□□ -1.65
TSPAN3-209ENST00000560715 C20orf203Q8NBC4 194 aa4.72□□□□□ -1.65
TSPAN3-209ENST00000560715 RNF5Q99942 180 aa4.72□□□□□ -1.65
TSPAN3-209ENST00000560715 CTSGP08311 255 aa4.72□□□□□ -1.65
TSPAN3-209ENST00000560715 RNASE3P12724 160 aaKnown RBP4.72□□□□□ -1.65
TSPAN3-209ENST00000560715 RBM3P98179 157 aaKnown RBP4.72□□□□□ -1.65
TSPAN3-209ENST00000560715 NDPQ00604 133 aa4.72□□□□□ -1.65
TSPAN3-209ENST00000560715 POLEQ07864 2286 aa4.72□□□□□ -1.65
TSPAN3-209ENST00000560715 TRBV10-3A0A0K0K1G6 114 aa4.71□□□□□ -1.65
TSPAN3-209ENST00000560715 LINC00313P59037 77 aa4.71□□□□□ -1.65
TSPAN3-209ENST00000560715 EGFEM1PQ0D2K5 195 aa4.71□□□□□ -1.65
TSPAN3-209ENST00000560715 PRR15Q8IV56 129 aa4.71□□□□□ -1.65
TSPAN3-209ENST00000560715 RP1L1Q8IWN7 2480 aaPredicted RBP4.71□□□□□ -1.65
TSPAN3-209ENST00000560715 NDUFA1O15239 70 aa4.71□□□□□ -1.66
TSPAN3-209ENST00000560715 DSCR9P59020 149 aa4.71□□□□□ -1.66
TSPAN3-209ENST00000560715 ZFAND2AQ8N6M9 145 aa4.71□□□□□ -1.66
TSPAN3-209ENST00000560715 PIEZO2Q9H5I5 2752 aa4.71□□□□□ -1.66
TSPAN3-209ENST00000560715 IGHV3OR16-8A0A075B7F1 116 aa4.71□□□□□ -1.66
TSPAN3-209ENST00000560715 IGHV4-30-2A0A087WSY4 118 aa4.71□□□□□ -1.66
TSPAN3-209ENST00000560715 CLPSL1A2RUU4 121 aa4.71□□□□□ -1.66
TSPAN3-209ENST00000560715 SOCS3O14543 225 aa4.71□□□□□ -1.66
TSPAN3-209ENST00000560715 NDUFC1O43677 76 aa4.71□□□□□ -1.66
TSPAN3-209ENST00000560715 A0A087X002 238 aa4.7□□□□□ -1.66
TSPAN3-209ENST00000560715 F8WEM9 126 aa4.7□□□□□ -1.66
TSPAN3-209ENST00000560715 IGHV3-23P01764 117 aa4.7□□□□□ -1.66
TSPAN3-209ENST00000560715 CD28P10747 220 aa4.7□□□□□ -1.66
TSPAN3-209ENST00000560715 MALRD1Q5VYJ5 2156 aa4.7□□□□□ -1.66
TSPAN3-209ENST00000560715 IGSF10Q6WRI0 2623 aa4.7□□□□□ -1.66
TSPAN3-209ENST00000560715 FASNP49327 2511 aaKnown RBP4.7□□□□□ -1.66
TSPAN3-209ENST00000560715 LYNX1G3V0Z9 82 aa4.7□□□□□ -1.66
TSPAN3-209ENST00000560715 GNRH2O43555 120 aa4.7□□□□□ -1.66
TSPAN3-209ENST00000560715 IGLV1-47P01700 117 aa4.7□□□□□ -1.66
TSPAN3-209ENST00000560715 LYNX1P0DP58 116 aa4.7□□□□□ -1.66
TSPAN3-209ENST00000560715 SNRPD3P62318 126 aaKnown RBP4.7□□□□□ -1.66
TSPAN3-209ENST00000560715 WFDC9Q8NEX5 89 aa4.7□□□□□ -1.66
TSPAN3-209ENST00000560715 ADGRG4Q8IZF6 3080 aa4.69□□□□□ -1.66
TSPAN3-209ENST00000560715 ENHOQ6UWT2 76 aa4.69□□□□□ -1.66
TSPAN3-209ENST00000560715 LAMTOR3Q9UHA4 124 aa4.69□□□□□ -1.66
TSPAN3-209ENST00000560715 IGHV7-81A0A0B4J1V7 117 aa4.69□□□□□ -1.66
TSPAN3-209ENST00000560715 TRAV13-2A0A0B4J235 113 aa4.69□□□□□ -1.66
TSPAN3-209ENST00000560715 BLCAPP62952 87 aa4.69□□□□□ -1.66
TSPAN3-209ENST00000560715 FAM104AQ969W3 186 aa4.69□□□□□ -1.66
TSPAN3-209ENST00000560715 RMI2Q96E14 147 aa4.69□□□□□ -1.66
TSPAN3-209ENST00000560715 ZNF625Q96I27 306 aaPredicted RBP4.69□□□□□ -1.66
TSPAN3-209ENST00000560715 KALRNO60229 2985 aa4.68□□□□□ -1.66
TSPAN3-209ENST00000560715 SOSTDC1Q6X4U4 206 aa4.68□□□□□ -1.66
TSPAN3-209ENST00000560715 BPESC1Q9GZL8 116 aa4.68□□□□□ -1.66
TSPAN3-209ENST00000560715 ZNF702PQ9H963 129 aa4.68□□□□□ -1.66
TSPAN3-209ENST00000560715 SNURFQ9Y675 71 aa4.68□□□□□ -1.66
TSPAN3-209ENST00000560715 IGHV3-35A0A0C4DH35 117 aa4.68□□□□□ -1.66
TSPAN3-209ENST00000560715 IGHV3-66A0A0C4DH42 116 aa4.68□□□□□ -1.66
TSPAN3-209ENST00000560715 IBA57-AS1B1ANH7 110 aa4.68□□□□□ -1.66
TSPAN3-209ENST00000560715 M0QY20 66 aa4.68□□□□□ -1.66
TSPAN3-209ENST00000560715 PRB1P04280 392 aa4.68□□□□□ -1.66
TSPAN3-209ENST00000560715 CSNK1G2-AS1Q8NCQ2 148 aa4.68□□□□□ -1.66
TSPAN3-209ENST00000560715 A8MUN3 132 aa4.67□□□□□ -1.66
TSPAN3-209ENST00000560715 NCR3O14931 201 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms