RNA–Protein interactions for RNA: ENST00000560620.1

CTDSPL2-209, Transcript of CTD small phosphatase like 2, humanhuman

TSL 3

Gene CTDSPL2, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-209ENST00000560620 TEX43Q6ZNM6 134 aa8.29□□□□□ -1.08
CTDSPL2-209ENST00000560620 TMEM141Q96I45 108 aa8.29□□□□□ -1.08
CTDSPL2-209ENST00000560620 CAMK2N2Q96S95 79 aa8.29□□□□□ -1.08
CTDSPL2-209ENST00000560620 PKIGQ9Y2B9 76 aa8.29□□□□□ -1.08
CTDSPL2-209ENST00000560620 PYGO1Q9Y3Y4 419 aa8.29□□□□□ -1.08
CTDSPL2-209ENST00000560620 IGLV4-3A0A075B6K6 122 aa8.28□□□□□ -1.08
CTDSPL2-209ENST00000560620 TGIF2-C20orf24A0A0A6YYL0 155 aa8.28□□□□□ -1.08
CTDSPL2-209ENST00000560620 K7EMI3 77 aa8.28□□□□□ -1.08
CTDSPL2-209ENST00000560620 RPL37AP61513 92 aaKnown RBP8.28□□□□□ -1.08
CTDSPL2-209ENST00000560620 COX19Q49B96 90 aa8.28□□□□□ -1.08
CTDSPL2-209ENST00000560620 SPACA4Q8TDM5 124 aa8.28□□□□□ -1.08
CTDSPL2-209ENST00000560620 C2orf88Q9BSF0 95 aa8.28□□□□□ -1.08
CTDSPL2-209ENST00000560620 GNB1LQ9BYB4 327 aa8.28□□□□□ -1.08
CTDSPL2-209ENST00000560620 A0A087WYN8 130 aa8.27□□□□□ -1.09
CTDSPL2-209ENST00000560620 G0S2P27469 103 aa8.27□□□□□ -1.09
CTDSPL2-209ENST00000560620 SPAG11BQ08648 103 aa8.27□□□□□ -1.09
CTDSPL2-209ENST00000560620 FABP9Q0Z7S8 132 aa8.27□□□□□ -1.09
CTDSPL2-209ENST00000560620 FAM104AQ969W3 186 aa8.27□□□□□ -1.09
CTDSPL2-209ENST00000560620 VCX2Q9H322 139 aa8.27□□□□□ -1.09
CTDSPL2-209ENST00000560620 MT-ND6P03923 174 aa8.26□□□□□ -1.09
CTDSPL2-209ENST00000560620 CIRBPQ14011 172 aaKnown RBP8.26□□□□□ -1.09
CTDSPL2-209ENST00000560620 ORAOV1Q8WV07 137 aa8.26□□□□□ -1.09
CTDSPL2-209ENST00000560620 MRPL18Q9H0U6 180 aaKnown RBP8.26□□□□□ -1.09
CTDSPL2-209ENST00000560620 A0A096LNI7 61 aa8.25□□□□□ -1.09
CTDSPL2-209ENST00000560620 IGHV3OR16-9A0A0B4J2B5 98 aa8.25□□□□□ -1.09
CTDSPL2-209ENST00000560620 SNAPINO95295 136 aa8.25□□□□□ -1.09
CTDSPL2-209ENST00000560620 Q6ZRU5 148 aa8.25□□□□□ -1.09
CTDSPL2-209ENST00000560620 SVBPQ8N300 66 aa8.25□□□□□ -1.09
CTDSPL2-209ENST00000560620 STPG4Q8N801 248 aa8.25□□□□□ -1.09
CTDSPL2-209ENST00000560620 OR10D4PQ8NGN7 298 aa8.25□□□□□ -1.09
CTDSPL2-209ENST00000560620 LINC00474Q9P2X8 69 aa8.25□□□□□ -1.09
CTDSPL2-209ENST00000560620 PAPPA-AS1Q5QFB9 102 aa8.24□□□□□ -1.09
CTDSPL2-209ENST00000560620 ZC2HC1BQ5TFG8 222 aa8.24□□□□□ -1.09
CTDSPL2-209ENST00000560620 C2orf48Q96LS8 159 aa8.24□□□□□ -1.09
CTDSPL2-209ENST00000560620 ALKBH7Q9BT30 221 aaPredicted RBP8.24□□□□□ -1.09
CTDSPL2-209ENST00000560620 SMCO4Q9NRQ5 59 aa8.24□□□□□ -1.09
CTDSPL2-209ENST00000560620 LOC107984640A0A0U1RRK4 108 aa8.23□□□□□ -1.09
CTDSPL2-209ENST00000560620 GAGE2BQ13066 116 aa8.23□□□□□ -1.09
CTDSPL2-209ENST00000560620 LINC00242Q5T6M2 205 aa8.23□□□□□ -1.09
CTDSPL2-209ENST00000560620 FA2HQ7L5A8 372 aa8.23□□□□□ -1.09
CTDSPL2-209ENST00000560620 C7orf33Q8WU49 177 aa8.23□□□□□ -1.09
CTDSPL2-209ENST00000560620 SCGB3A1Q96QR1 104 aa8.23□□□□□ -1.09
CTDSPL2-209ENST00000560620 J3QL48 77 aa8.22□□□□□ -1.09
CTDSPL2-209ENST00000560620 UBE2D1P51668 147 aa8.22□□□□□ -1.09
CTDSPL2-209ENST00000560620 RPL18AQ02543 176 aaKnown RBP8.22□□□□□ -1.09
CTDSPL2-209ENST00000560620 TOMM6Q96B49 74 aa8.22□□□□□ -1.09
CTDSPL2-209ENST00000560620 PLAC8Q9NZF1 115 aa8.22□□□□□ -1.09
CTDSPL2-209ENST00000560620 TRAPPC1Q9Y5R8 145 aa8.22□□□□□ -1.09
CTDSPL2-209ENST00000560620 VPS13BQ7Z7G8 4022 aa8.21□□□□□ -1.09
CTDSPL2-209ENST00000560620 FLG2Q5D862 2391 aaPredicted RBP8.21□□□□□ -1.09
CTDSPL2-209ENST00000560620 A0A087WZ39 114 aa8.21□□□□□ -1.1
CTDSPL2-209ENST00000560620 A0A0J9YXV3 536 aa8.21□□□□□ -1.1
CTDSPL2-209ENST00000560620 IGIPA6NJ69 53 aa8.21□□□□□ -1.1
CTDSPL2-209ENST00000560620 NDUFA1O15239 70 aa8.21□□□□□ -1.1
CTDSPL2-209ENST00000560620 NPSP0C0P6 89 aa8.21□□□□□ -1.1
CTDSPL2-209ENST00000560620 PTTG1IPP53801 180 aa8.2□□□□□ -1.1
CTDSPL2-209ENST00000560620 KRTAP10-4P60372 401 aaPredicted RBP8.2□□□□□ -1.1
CTDSPL2-209ENST00000560620 LINC00173Q6ZV60 143 aa8.2□□□□□ -1.1
CTDSPL2-209ENST00000560620 ERASQ7Z444 233 aa8.2□□□□□ -1.1
CTDSPL2-209ENST00000560620 AMELXQ99217 191 aa8.2□□□□□ -1.1
CTDSPL2-209ENST00000560620 TIMM17AQ99595 171 aa8.2□□□□□ -1.1
CTDSPL2-209ENST00000560620 GEMIN7Q9H840 131 aaKnown RBP8.2□□□□□ -1.1
CTDSPL2-209ENST00000560620 LINC01549A6NIU2 74 aa8.19□□□□□ -1.1
CTDSPL2-209ENST00000560620 F8WDY8 70 aa8.19□□□□□ -1.1
CTDSPL2-209ENST00000560620 PRSS2P07478 247 aa8.19□□□□□ -1.1
CTDSPL2-209ENST00000560620 SEC11AP67812 179 aa8.19□□□□□ -1.1
CTDSPL2-209ENST00000560620 PACRGQ96M98 296 aaPredicted RBP8.19□□□□□ -1.1
CTDSPL2-209ENST00000560620 TOMM7Q9P0U1 55 aa8.19□□□□□ -1.1
CTDSPL2-209ENST00000560620 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.18□□□□□ -1.1
CTDSPL2-209ENST00000560620 HERVK_113P63121 156 aa8.18□□□□□ -1.1
CTDSPL2-209ENST00000560620 LCE2DQ5TA82 110 aaPredicted RBP8.18□□□□□ -1.1
CTDSPL2-209ENST00000560620 UNQ6190/PRO20217Q6UXQ8 127 aa8.18□□□□□ -1.1
CTDSPL2-209ENST00000560620 MRPL35Q9NZE8 188 aaKnown RBP8.18□□□□□ -1.1
CTDSPL2-209ENST00000560620 CKS1BP61024 79 aa8.17□□□□□ -1.1
CTDSPL2-209ENST00000560620 RNF151Q2KHN1 245 aa8.17□□□□□ -1.1
CTDSPL2-209ENST00000560620 MYCBP2O75592 4640 aa8.17□□□□□ -1.1
CTDSPL2-209ENST00000560620 LINC01546A6NGU7 62 aa8.16□□□□□ -1.1
CTDSPL2-209ENST00000560620 C6orf226Q5I0X4 101 aa8.16□□□□□ -1.1
CTDSPL2-209ENST00000560620 C10orf25Q5T742 122 aa8.16□□□□□ -1.1
CTDSPL2-209ENST00000560620 C2orf82Q6UX34 121 aa8.16□□□□□ -1.1
CTDSPL2-209ENST00000560620 LINC00469Q8N7U9 141 aa8.16□□□□□ -1.1
CTDSPL2-209ENST00000560620 NDUFA6P56556 154 aa8.15□□□□□ -1.1
CTDSPL2-209ENST00000560620 LINC01561Q8N1V8 128 aa8.15□□□□□ -1.1
CTDSPL2-209ENST00000560620 C18orf32Q8TCD1 76 aa8.15□□□□□ -1.1
CTDSPL2-209ENST00000560620 CDKN2A-AS1Q9UH64 79 aa8.15□□□□□ -1.1
CTDSPL2-209ENST00000560620 LINC00614P0C842 121 aa8.14□□□□□ -1.11
CTDSPL2-209ENST00000560620 HNRNPA3P51991 378 aaKnown RBP8.14□□□□□ -1.11
CTDSPL2-209ENST00000560620 KIAA0087Q14695 138 aa8.14□□□□□ -1.11
CTDSPL2-209ENST00000560620 GAGE2EQ4V326 116 aa8.14□□□□□ -1.11
CTDSPL2-209ENST00000560620 C9orf116Q5BN46 136 aaPredicted RBP8.14□□□□□ -1.11
CTDSPL2-209ENST00000560620 C6orf48Q9UBA6 75 aa8.14□□□□□ -1.11
CTDSPL2-209ENST00000560620 GAGE2DQ9UEU5 116 aa8.14□□□□□ -1.11
CTDSPL2-209ENST00000560620 DMBT1Q9UGM3 2413 aaPredicted RBP8.13□□□□□ -1.11
CTDSPL2-209ENST00000560620 TRBV30A0A0K0K1B3 111 aa8.13□□□□□ -1.11
CTDSPL2-209ENST00000560620 KRTAP29-1A8MX34 341 aaPredicted RBP8.13□□□□□ -1.11
CTDSPL2-209ENST00000560620 RAB5BP61020 215 aa8.13□□□□□ -1.11
CTDSPL2-209ENST00000560620 FAM19A3Q7Z5A8 133 aa8.13□□□□□ -1.11
CTDSPL2-209ENST00000560620 TINCRA0A1B0GVN0 87 aa8.12□□□□□ -1.11
CTDSPL2-209ENST00000560620 A0A1W2PNN7 141 aa8.12□□□□□ -1.11
CTDSPL2-209ENST00000560620 PMVKQ15126 192 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 93.1 ms