RNA–Protein interactions for RNA: ENST00000560549.5

TMOD3-207, Transcript of tropomodulin 3, humanhuman

TSL 1 (best)

Gene TMOD3, Length 1,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMOD3-207ENST00000560549 Q8N377 158 aa3.05□□□□□ -1.92
TMOD3-207ENST00000560549 CSNK1G2-AS1Q8NCQ2 148 aa3.05□□□□□ -1.92
TMOD3-207ENST00000560549 AP1S3Q96PC3 154 aa3.05□□□□□ -1.92
TMOD3-207ENST00000560549 C20orf78Q9BR46 151 aa3.05□□□□□ -1.92
TMOD3-207ENST00000560549 TTTY13Q9BZ97 58 aa3.05□□□□□ -1.92
TMOD3-207ENST00000560549 HHLA3Q9XRX5 114 aa3.05□□□□□ -1.92
TMOD3-207ENST00000560549 IGHV3-73A0A0B4J1V6 119 aa3.04□□□□□ -1.92
TMOD3-207ENST00000560549 A0A0J9YWU9 116 aa3.04□□□□□ -1.92
TMOD3-207ENST00000560549 FAM74A4Q5TZK3 123 aa3.04□□□□□ -1.92
TMOD3-207ENST00000560549 SLC25A34Q6PIV7 304 aa3.04□□□□□ -1.92
TMOD3-207ENST00000560549 GTSCR1Q86UQ5 136 aa3.04□□□□□ -1.92
TMOD3-207ENST00000560549 C1orf158Q8N1D5 194 aa3.04□□□□□ -1.92
TMOD3-207ENST00000560549 NKAPP1Q8N9T2 125 aa3.04□□□□□ -1.92
TMOD3-207ENST00000560549 C11orf72Q8NBR9 251 aa3.04□□□□□ -1.92
TMOD3-207ENST00000560549 TOMM6Q96B49 74 aa3.04□□□□□ -1.92
TMOD3-207ENST00000560549 SCGB3A1Q96QR1 104 aa3.04□□□□□ -1.92
TMOD3-207ENST00000560549 WFDC10AQ9H1F0 79 aa3.04□□□□□ -1.92
TMOD3-207ENST00000560549 MRPL35Q9NZE8 188 aaKnown RBP3.04□□□□□ -1.92
TMOD3-207ENST00000560549 A0A087WX48 190 aa3.03□□□□□ -1.92
TMOD3-207ENST00000560549 TRBV6-5A0A0K0K1A5 114 aa3.03□□□□□ -1.92
TMOD3-207ENST00000560549 FAM240AA0A1B0GVK7 77 aa3.03□□□□□ -1.92
TMOD3-207ENST00000560549 IGIPA6NJ69 53 aa3.03□□□□□ -1.92
TMOD3-207ENST00000560549 H7C1H1 209 aa3.03□□□□□ -1.92
TMOD3-207ENST00000560549 IGKCP01834 107 aa3.03□□□□□ -1.92
TMOD3-207ENST00000560549 G0S2P27469 103 aa3.03□□□□□ -1.92
TMOD3-207ENST00000560549 RPL39P62891 51 aaKnown RBP3.03□□□□□ -1.92
TMOD3-207ENST00000560549 PRR4Q16378 134 aa3.03□□□□□ -1.92
TMOD3-207ENST00000560549 MPV17L2Q567V2 206 aa3.03□□□□□ -1.92
TMOD3-207ENST00000560549 BVES-AS1Q5T3Y7 98 aa3.03□□□□□ -1.92
TMOD3-207ENST00000560549 C2orf66Q6UXQ4 117 aa3.03□□□□□ -1.92
TMOD3-207ENST00000560549 ZFP2Q6ZN57 461 aa3.03□□□□□ -1.92
TMOD3-207ENST00000560549 C3orf56Q8N813 242 aa3.03□□□□□ -1.92
TMOD3-207ENST00000560549 FAM104AQ969W3 186 aa3.03□□□□□ -1.92
TMOD3-207ENST00000560549 LINC01587Q99440 93 aa3.03□□□□□ -1.92
TMOD3-207ENST00000560549 LINC00467Q9BRT7 94 aa3.03□□□□□ -1.92
TMOD3-207ENST00000560549 SPANXB1Q9NS25 103 aaPredicted RBP3.03□□□□□ -1.92
TMOD3-207ENST00000560549 MRPL16Q9NX20 251 aaKnown RBP3.03□□□□□ -1.92
TMOD3-207ENST00000560549 MUC4Q99102 2169 aa3.03□□□□□ -1.92
TMOD3-207ENST00000560549 TRBV27A0A0K0K1C4 114 aa3.03□□□□□ -1.93
TMOD3-207ENST00000560549 SDHAF1A6NFY7 115 aa3.03□□□□□ -1.93
TMOD3-207ENST00000560549 M0R2P5 195 aa3.03□□□□□ -1.93
TMOD3-207ENST00000560549 DPM2O94777 84 aa3.03□□□□□ -1.93
TMOD3-207ENST00000560549 IGLV1-51P01701 117 aa3.03□□□□□ -1.93
TMOD3-207ENST00000560549 ZNF25P17030 456 aaPredicted RBP3.03□□□□□ -1.93
TMOD3-207ENST00000560549 PRR3P79522 188 aaKnown RBP3.03□□□□□ -1.93
TMOD3-207ENST00000560549 ZNF56Q15929 161 aa3.03□□□□□ -1.93
TMOD3-207ENST00000560549 ORMDL2Q53FV1 153 aa3.03□□□□□ -1.93
TMOD3-207ENST00000560549 COL5A1-AS1Q5SY13 56 aa3.03□□□□□ -1.93
TMOD3-207ENST00000560549 CFAP126Q5VTH2 177 aa3.03□□□□□ -1.93
TMOD3-207ENST00000560549 MRPL55Q7Z7F7 128 aaKnown RBP3.03□□□□□ -1.93
TMOD3-207ENST00000560549 IGLV4-69A0A075B6H9 119 aa3.02□□□□□ -1.93
TMOD3-207ENST00000560549 TRAV12-1A0A0B4J245 112 aa3.02□□□□□ -1.93
TMOD3-207ENST00000560549 TINCRA0A1B0GVN0 87 aa3.02□□□□□ -1.93
TMOD3-207ENST00000560549 OR11H12B2RN74 326 aa3.02□□□□□ -1.93
TMOD3-207ENST00000560549 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.02□□□□□ -1.93
TMOD3-207ENST00000560549 TAX1BP3O14907 124 aa3.02□□□□□ -1.93
TMOD3-207ENST00000560549 DLEU1O43261 78 aa3.02□□□□□ -1.93
TMOD3-207ENST00000560549 PPP1R17O96001 155 aa3.02□□□□□ -1.93
TMOD3-207ENST00000560549 INSP01308 110 aa3.02□□□□□ -1.93
TMOD3-207ENST00000560549 NMUP48645 174 aa3.02□□□□□ -1.93
TMOD3-207ENST00000560549 DSCR10P59022 87 aa3.02□□□□□ -1.93
TMOD3-207ENST00000560549 FAM19A5Q7Z5A7 132 aaPredicted RBP3.02□□□□□ -1.93
TMOD3-207ENST00000560549 TMEM208Q9BTX3 173 aa3.02□□□□□ -1.93
TMOD3-207ENST00000560549 TP53TG1Q9Y2A0 90 aa3.02□□□□□ -1.93
TMOD3-207ENST00000560549 TENM1Q9UKZ4 2725 aa3.01□□□□□ -1.93
TMOD3-207ENST00000560549 IGHV3OR16-9A0A0B4J2B5 98 aa3.01□□□□□ -1.93
TMOD3-207ENST00000560549 PLAC8L1A1L4L8 177 aa3.01□□□□□ -1.93
TMOD3-207ENST00000560549 C11orf86A6NJI1 115 aa3.01□□□□□ -1.93
TMOD3-207ENST00000560549 F8VRH5 84 aa3.01□□□□□ -1.93
TMOD3-207ENST00000560549 K7EMI3 77 aa3.01□□□□□ -1.93
TMOD3-207ENST00000560549 K7EP13 123 aa3.01□□□□□ -1.93
TMOD3-207ENST00000560549 EMP1P54849 157 aa3.01□□□□□ -1.93
TMOD3-207ENST00000560549 EGFEM1PQ0D2K5 195 aa3.01□□□□□ -1.93
TMOD3-207ENST00000560549 TMEM97Q5BJF2 176 aa3.01□□□□□ -1.93
TMOD3-207ENST00000560549 CEMP1Q6PRD7 247 aaPredicted RBP3.01□□□□□ -1.93
TMOD3-207ENST00000560549 NDUFA11Q86Y39 141 aa3.01□□□□□ -1.93
TMOD3-207ENST00000560549 CST9LQ9H4G1 147 aa3.01□□□□□ -1.93
TMOD3-207ENST00000560549 EDA2RQ9HAV5 297 aa3.01□□□□□ -1.93
TMOD3-207ENST00000560549 CYSLTR1Q9Y271 337 aa3.01□□□□□ -1.93
TMOD3-207ENST00000560549 UBR4Q5T4S7 5183 aa3□□□□□ -1.93
TMOD3-207ENST00000560549 TMEM238C9JI98 176 aa3□□□□□ -1.93
TMOD3-207ENST00000560549 I3L3M4 83 aa3□□□□□ -1.93
TMOD3-207ENST00000560549 IGHV3-53P01767 116 aa3□□□□□ -1.93
TMOD3-207ENST00000560549 RHOHQ15669 191 aa3□□□□□ -1.93
TMOD3-207ENST00000560549 Q6ZTI0 123 aa3□□□□□ -1.93
TMOD3-207ENST00000560549 C20orf203Q8NBC4 194 aa3□□□□□ -1.93
TMOD3-207ENST00000560549 ZNRF2Q8NHG8 242 aa3□□□□□ -1.93
TMOD3-207ENST00000560549 TMEM141Q96I45 108 aa3□□□□□ -1.93
TMOD3-207ENST00000560549 CHCHD7Q9BUK0 85 aa3□□□□□ -1.93
TMOD3-207ENST00000560549 DHRS4-AS1Q9P1J3 65 aa3□□□□□ -1.93
TMOD3-207ENST00000560549 TRBV25-1A0A075B6N4 114 aa2.99□□□□□ -1.93
TMOD3-207ENST00000560549 TRGV1A0A0A0MS02 117 aa2.99□□□□□ -1.93
TMOD3-207ENST00000560549 TRAV8-4A0A0B4J246 113 aa2.99□□□□□ -1.93
TMOD3-207ENST00000560549 TRAV8-6A0A0B4J262 113 aa2.99□□□□□ -1.93
TMOD3-207ENST00000560549 A0A0J9YXV3 536 aa2.99□□□□□ -1.93
TMOD3-207ENST00000560549 A8MWV9 139 aa2.99□□□□□ -1.93
TMOD3-207ENST00000560549 H0Y9J4 135 aa2.99□□□□□ -1.93
TMOD3-207ENST00000560549 PLNP26678 52 aa2.99□□□□□ -1.93
TMOD3-207ENST00000560549 TSPEAR-AS2P59090 65 aa2.99□□□□□ -1.93
TMOD3-207ENST00000560549 KIAA0087Q14695 138 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms