RNA–Protein interactions for RNA: ENST00000560519.1

HERC1-209, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 591 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-209ENST00000560519 ZNF25P17030 456 aaPredicted RBP6.01□□□□□ -1.45
HERC1-209ENST00000560519 RAB5AP20339 215 aa6.01□□□□□ -1.45
HERC1-209ENST00000560519 TMEM18Q96B42 140 aa6.01□□□□□ -1.45
HERC1-209ENST00000560519 CARD19Q96LW7 228 aa6.01□□□□□ -1.45
HERC1-209ENST00000560519 LOC100996750A0A140TA64 210 aa6□□□□□ -1.45
HERC1-209ENST00000560519 PRSS47A8MTI9 375 aa6□□□□□ -1.45
HERC1-209ENST00000560519 ESDP10768 282 aa6□□□□□ -1.45
HERC1-209ENST00000560519 KRTAP10-8P60410 259 aa6□□□□□ -1.45
HERC1-209ENST00000560519 FABP9Q0Z7S8 132 aa6□□□□□ -1.45
HERC1-209ENST00000560519 RNASEKQ6P5S7 137 aaKnown RBP6□□□□□ -1.45
HERC1-209ENST00000560519 TMEM101Q96IK0 257 aa6□□□□□ -1.45
HERC1-209ENST00000560519 KRTAP4-6Q9BYQ5 205 aa6□□□□□ -1.45
HERC1-209ENST00000560519 MRPL18Q9H0U6 180 aaKnown RBP6□□□□□ -1.45
HERC1-209ENST00000560519 TRAPPC1Q9Y5R8 145 aa6□□□□□ -1.45
HERC1-209ENST00000560519 IGHV1-58A0A0C4DH39 117 aa5.99□□□□□ -1.45
HERC1-209ENST00000560519 K7EMI3 77 aa5.99□□□□□ -1.45
HERC1-209ENST00000560519 FGF6P10767 208 aa5.99□□□□□ -1.45
HERC1-209ENST00000560519 KIAA1644Q3SXP7 199 aa5.99□□□□□ -1.45
HERC1-209ENST00000560519 OR5A1Q8NGJ0 315 aa5.99□□□□□ -1.45
HERC1-209ENST00000560519 NXT2Q9NPJ8 142 aaKnown RBP5.99□□□□□ -1.45
HERC1-209ENST00000560519 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.98□□□□□ -1.45
HERC1-209ENST00000560519 LOC389332A0A1B0GUA5 103 aa5.98□□□□□ -1.45
HERC1-209ENST00000560519 IGKV2-29A2NJV5 120 aaPredicted RBP5.98□□□□□ -1.45
HERC1-209ENST00000560519 ZNF561-AS1K7EIQ3 104 aa5.98□□□□□ -1.45
HERC1-209ENST00000560519 LCE2BO14633 110 aa5.98□□□□□ -1.45
HERC1-209ENST00000560519 G0S2P27469 103 aa5.98□□□□□ -1.45
HERC1-209ENST00000560519 FOXI1Q12951 378 aa5.98□□□□□ -1.45
HERC1-209ENST00000560519 ODF1Q14990 250 aa5.98□□□□□ -1.45
HERC1-209ENST00000560519 CBLN2Q8IUK8 224 aa5.98□□□□□ -1.45
HERC1-209ENST00000560519 Q8N8P6 123 aa5.98□□□□□ -1.45
HERC1-209ENST00000560519 XCL1P47992 114 aa5.97□□□□□ -1.45
HERC1-209ENST00000560519 ORMDL2Q53FV1 153 aa5.97□□□□□ -1.45
HERC1-209ENST00000560519 MRPL52Q86TS9 123 aaKnown RBP5.97□□□□□ -1.45
HERC1-209ENST00000560519 ZNF664Q8N3J9 261 aa5.97□□□□□ -1.45
HERC1-209ENST00000560519 YPEL4Q96NS1 127 aa5.97□□□□□ -1.45
HERC1-209ENST00000560519 ALKBH7Q9BT30 221 aaPredicted RBP5.97□□□□□ -1.45
HERC1-209ENST00000560519 LOC107984640A0A0U1RRK4 108 aa5.96□□□□□ -1.46
HERC1-209ENST00000560519 CCL25O15444 150 aa5.96□□□□□ -1.46
HERC1-209ENST00000560519 SYCNQ0VAF6 134 aa5.96□□□□□ -1.46
HERC1-209ENST00000560519 SRSF9Q13242 221 aaKnown RBP eCLIP5.96□□□□□ -1.46
HERC1-209ENST00000560519 SS18Q15532 418 aa5.96□□□□□ -1.46
HERC1-209ENST00000560519 TIMM21Q9BVV7 248 aa5.96□□□□□ -1.46
HERC1-209ENST00000560519 SPANXA1Q9NS26 97 aa5.96□□□□□ -1.46
HERC1-209ENST00000560519 CSDC2Q9Y534 153 aaKnown RBP5.96□□□□□ -1.46
HERC1-209ENST00000560519 LINC00959A0A1B0GUT2 108 aa5.95□□□□□ -1.46
HERC1-209ENST00000560519 S100A1P23297 94 aa5.95□□□□□ -1.46
HERC1-209ENST00000560519 IFI27P40305 119 aaPredicted RBP5.95□□□□□ -1.46
HERC1-209ENST00000560519 PTTG1IPP53801 180 aa5.95□□□□□ -1.46
HERC1-209ENST00000560519 FA2HQ7L5A8 372 aa5.95□□□□□ -1.46
HERC1-209ENST00000560519 UBE2D4Q9Y2X8 147 aa5.95□□□□□ -1.46
HERC1-209ENST00000560519 LINC01549A6NIU2 74 aa5.94□□□□□ -1.46
HERC1-209ENST00000560519 CD164L2Q6UWJ8 174 aa5.94□□□□□ -1.46
HERC1-209ENST00000560519 CDC42SE2Q9NRR3 84 aa5.94□□□□□ -1.46
HERC1-209ENST00000560519 PSORS1C2Q9UIG4 136 aa5.94□□□□□ -1.46
HERC1-209ENST00000560519 CYSLTR1Q9Y271 337 aa5.94□□□□□ -1.46
HERC1-209ENST00000560519 IGLV4-69A0A075B6H9 119 aa5.93□□□□□ -1.46
HERC1-209ENST00000560519 MALP21145 153 aa5.93□□□□□ -1.46
HERC1-209ENST00000560519 RAB5BP61020 215 aa5.93□□□□□ -1.46
HERC1-209ENST00000560519 RPL39P62891 51 aaKnown RBP5.93□□□□□ -1.46
HERC1-209ENST00000560519 C2orf66Q6UXQ4 117 aa5.93□□□□□ -1.46
HERC1-209ENST00000560519 PYGO1Q9Y3Y4 419 aa5.93□□□□□ -1.46
HERC1-209ENST00000560519 A0A0U1RQV1 116 aa5.92□□□□□ -1.46
HERC1-209ENST00000560519 LINC01546A6NGU7 62 aa5.92□□□□□ -1.46
HERC1-209ENST00000560519 COLCA2A8K830 154 aa5.92□□□□□ -1.46
HERC1-209ENST00000560519 APOMO95445 188 aa5.92□□□□□ -1.46
HERC1-209ENST00000560519 NPSP0C0P6 89 aa5.92□□□□□ -1.46
HERC1-209ENST00000560519 MRPS36P82909 103 aaKnown RBP5.92□□□□□ -1.46
HERC1-209ENST00000560519 GAGE2BQ13066 116 aa5.92□□□□□ -1.46
HERC1-209ENST00000560519 PAPPA-AS1Q5QFB9 102 aa5.92□□□□□ -1.46
HERC1-209ENST00000560519 C18orf32Q8TCD1 76 aa5.92□□□□□ -1.46
HERC1-209ENST00000560519 CAMK2N2Q96S95 79 aa5.92□□□□□ -1.46
HERC1-209ENST00000560519 C1orf196B1AJZ1 125 aa5.91□□□□□ -1.46
HERC1-209ENST00000560519 COX7A2LO14548 114 aa5.91□□□□□ -1.46
HERC1-209ENST00000560519 ATP6V1G1O75348 118 aa5.91□□□□□ -1.46
HERC1-209ENST00000560519 LINC00614P0C842 121 aa5.91□□□□□ -1.46
HERC1-209ENST00000560519 RPL18AQ02543 176 aaKnown RBP5.91□□□□□ -1.46
HERC1-209ENST00000560519 Q6ZN92 141 aa5.91□□□□□ -1.46
HERC1-209ENST00000560519 DIRC1Q969H9 104 aa5.91□□□□□ -1.46
HERC1-209ENST00000560519 LINC00526Q96FQ7 95 aa5.91□□□□□ -1.46
HERC1-209ENST00000560519 SCO1O75880 301 aa5.9□□□□□ -1.46
HERC1-209ENST00000560519 TRGC2P03986 189 aa5.9□□□□□ -1.46
HERC1-209ENST00000560519 C1orf137Q5JT78 98 aa5.9□□□□□ -1.46
HERC1-209ENST00000560519 Q6ZUT4 128 aa5.9□□□□□ -1.46
HERC1-209ENST00000560519 TOMM6Q96B49 74 aa5.9□□□□□ -1.46
HERC1-209ENST00000560519 TMEM141Q96I45 108 aa5.9□□□□□ -1.46
HERC1-209ENST00000560519 C2orf48Q96LS8 159 aa5.9□□□□□ -1.46
HERC1-209ENST00000560519 C2orf88Q9BSF0 95 aa5.9□□□□□ -1.46
HERC1-209ENST00000560519 TRAV13-1A0A0B4J241 112 aa5.89□□□□□ -1.47
HERC1-209ENST00000560519 IFITM10A6NMD0 228 aa5.89□□□□□ -1.47
HERC1-209ENST00000560519 C9orf116Q5BN46 136 aaPredicted RBP5.89□□□□□ -1.47
HERC1-209ENST00000560519 TEX43Q6ZNM6 134 aa5.89□□□□□ -1.47
HERC1-209ENST00000560519 ERASQ7Z444 233 aa5.89□□□□□ -1.47
HERC1-209ENST00000560519 BAGE3Q86Y29 109 aa5.89□□□□□ -1.47
HERC1-209ENST00000560519 CHCHD1Q96BP2 118 aaKnown RBP5.89□□□□□ -1.47
HERC1-209ENST00000560519 SCGB3A1Q96QR1 104 aa5.89□□□□□ -1.47
HERC1-209ENST00000560519 TIMM17AQ99595 171 aa5.89□□□□□ -1.47
HERC1-209ENST00000560519 VCX2Q9H322 139 aa5.89□□□□□ -1.47
HERC1-209ENST00000560519 IGLV4-3A0A075B6K6 122 aa5.88□□□□□ -1.47
HERC1-209ENST00000560519 IGIPA6NJ69 53 aa5.88□□□□□ -1.47
HERC1-209ENST00000560519 HBDP02042 147 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms