RNA–Protein interactions for RNA: ENST00000560492.1

CDC42BPB-207, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 646 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-207ENST00000560492 CARD19Q96LW7 228 aa6.52□□□□□ -1.37
CDC42BPB-207ENST00000560492 GNB1LQ9BYB4 327 aa6.52□□□□□ -1.37
CDC42BPB-207ENST00000560492 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.51□□□□□ -1.37
CDC42BPB-207ENST00000560492 GVQW2A0A096LPI5 108 aaPredicted RBP6.51□□□□□ -1.37
CDC42BPB-207ENST00000560492 IGKV2-29A2NJV5 120 aaPredicted RBP6.51□□□□□ -1.37
CDC42BPB-207ENST00000560492 TRGC2P03986 189 aa6.51□□□□□ -1.37
CDC42BPB-207ENST00000560492 XCL1P47992 114 aa6.51□□□□□ -1.37
CDC42BPB-207ENST00000560492 A0A1B0GXF2 115 aa6.5□□□□□ -1.37
CDC42BPB-207ENST00000560492 ZNF561-AS1K7EIQ3 104 aa6.5□□□□□ -1.37
CDC42BPB-207ENST00000560492 APCSP02743 223 aa6.5□□□□□ -1.37
CDC42BPB-207ENST00000560492 FABP9Q0Z7S8 132 aa6.5□□□□□ -1.37
CDC42BPB-207ENST00000560492 GAGE2BQ13066 116 aa6.5□□□□□ -1.37
CDC42BPB-207ENST00000560492 TMEM136Q6ZRR5 245 aa6.5□□□□□ -1.37
CDC42BPB-207ENST00000560492 IGHV1-58A0A0C4DH39 117 aa6.49□□□□□ -1.37
CDC42BPB-207ENST00000560492 NTF3P20783 257 aa6.49□□□□□ -1.37
CDC42BPB-207ENST00000560492 TMEM101Q96IK0 257 aa6.49□□□□□ -1.37
CDC42BPB-207ENST00000560492 CNFNQ9BYD5 112 aa6.49□□□□□ -1.37
CDC42BPB-207ENST00000560492 KRTAP9-3Q9BYQ3 159 aa6.49□□□□□ -1.37
CDC42BPB-207ENST00000560492 TRAV26-2A0A0B4J265 109 aa6.48□□□□□ -1.37
CDC42BPB-207ENST00000560492 CCL25O15444 150 aa6.48□□□□□ -1.37
CDC42BPB-207ENST00000560492 S100A6P06703 90 aa6.48□□□□□ -1.37
CDC42BPB-207ENST00000560492 FGF6P10767 208 aa6.48□□□□□ -1.37
CDC42BPB-207ENST00000560492 FOXI1Q12951 378 aa6.48□□□□□ -1.37
CDC42BPB-207ENST00000560492 SRSF9Q13242 221 aaKnown RBP eCLIP6.48□□□□□ -1.37
CDC42BPB-207ENST00000560492 SYCNQ0VAF6 134 aa6.47□□□□□ -1.37
CDC42BPB-207ENST00000560492 SS18Q15532 418 aa6.47□□□□□ -1.37
CDC42BPB-207ENST00000560492 OR5A1Q8NGJ0 315 aa6.47□□□□□ -1.37
CDC42BPB-207ENST00000560492 RPL39LQ96EH5 51 aaKnown RBP6.47□□□□□ -1.37
CDC42BPB-207ENST00000560492 TMEM191AQ9H0A3 160 aa6.47□□□□□ -1.37
CDC42BPB-207ENST00000560492 LOC107984640A0A0U1RRK4 108 aa6.46□□□□□ -1.38
CDC42BPB-207ENST00000560492 NCR2O95944 276 aa6.46□□□□□ -1.38
CDC42BPB-207ENST00000560492 PMCHP20382 165 aa6.46□□□□□ -1.38
CDC42BPB-207ENST00000560492 MALP21145 153 aa6.46□□□□□ -1.38
CDC42BPB-207ENST00000560492 PTTG1IPP53801 180 aa6.46□□□□□ -1.38
CDC42BPB-207ENST00000560492 KIAA1644Q3SXP7 199 aa6.46□□□□□ -1.38
CDC42BPB-207ENST00000560492 C1orf137Q5JT78 98 aa6.46□□□□□ -1.38
CDC42BPB-207ENST00000560492 ZNF664Q8N3J9 261 aa6.46□□□□□ -1.38
CDC42BPB-207ENST00000560492 GATD1Q8NB37 220 aa6.46□□□□□ -1.38
CDC42BPB-207ENST00000560492 LPAP08519 4548 aa6.46□□□□□ -1.38
CDC42BPB-207ENST00000560492 LINC00959A0A1B0GUT2 108 aa6.45□□□□□ -1.38
CDC42BPB-207ENST00000560492 H7C423 109 aa6.45□□□□□ -1.38
CDC42BPB-207ENST00000560492 ZNF25P17030 456 aaPredicted RBP6.45□□□□□ -1.38
CDC42BPB-207ENST00000560492 LINC00310P59036 64 aa6.45□□□□□ -1.38
CDC42BPB-207ENST00000560492 RPL18AQ02543 176 aaKnown RBP6.45□□□□□ -1.38
CDC42BPB-207ENST00000560492 FAM104BQ5XKR9 115 aa6.45□□□□□ -1.38
CDC42BPB-207ENST00000560492 AMN1Q8IY45 258 aa6.45□□□□□ -1.38
CDC42BPB-207ENST00000560492 PSORS1C2Q9UIG4 136 aa6.45□□□□□ -1.38
CDC42BPB-207ENST00000560492 SDHAF1A6NFY7 115 aa6.44□□□□□ -1.38
CDC42BPB-207ENST00000560492 HIST1H2BKO60814 126 aa6.44□□□□□ -1.38
CDC42BPB-207ENST00000560492 HIST1H2BJP06899 126 aa6.44□□□□□ -1.38
CDC42BPB-207ENST00000560492 HIST1H2BOP23527 126 aa6.44□□□□□ -1.38
CDC42BPB-207ENST00000560492 CKS2P33552 79 aa6.44□□□□□ -1.38
CDC42BPB-207ENST00000560492 HIST1H2BBP33778 126 aa6.44□□□□□ -1.38
CDC42BPB-207ENST00000560492 HIST1H2BDP58876 126 aa6.44□□□□□ -1.38
CDC42BPB-207ENST00000560492 HIST1H2BCP62807 126 aa6.44□□□□□ -1.38
CDC42BPB-207ENST00000560492 HIST2H2BEQ16778 126 aa6.44□□□□□ -1.38
CDC42BPB-207ENST00000560492 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.44□□□□□ -1.38
CDC42BPB-207ENST00000560492 ORMDL3Q8N138 153 aa6.44□□□□□ -1.38
CDC42BPB-207ENST00000560492 PRR26Q8N8Z3 221 aa6.44□□□□□ -1.38
CDC42BPB-207ENST00000560492 HIST1H2BHQ93079 126 aa6.44□□□□□ -1.38
CDC42BPB-207ENST00000560492 CAMK2N2Q96S95 79 aa6.44□□□□□ -1.38
CDC42BPB-207ENST00000560492 HIST1H2BNQ99877 126 aa6.44□□□□□ -1.38
CDC42BPB-207ENST00000560492 HIST1H2BMQ99879 126 aa6.44□□□□□ -1.38
CDC42BPB-207ENST00000560492 IGLV4-69A0A075B6H9 119 aa6.43□□□□□ -1.38
CDC42BPB-207ENST00000560492 A0A0U1RQV1 116 aa6.43□□□□□ -1.38
CDC42BPB-207ENST00000560492 D6R8Y8 96 aa6.43□□□□□ -1.38
CDC42BPB-207ENST00000560492 PPBPP02775 128 aa6.43□□□□□ -1.38
CDC42BPB-207ENST00000560492 NDUFA6P56556 154 aa6.43□□□□□ -1.38
CDC42BPB-207ENST00000560492 PRR4Q16378 134 aa6.43□□□□□ -1.38
CDC42BPB-207ENST00000560492 MRPL51Q4U2R6 128 aaKnown RBP6.43□□□□□ -1.38
CDC42BPB-207ENST00000560492 BAGE3Q86Y29 109 aa6.43□□□□□ -1.38
CDC42BPB-207ENST00000560492 MRAP2Q96G30 205 aa6.43□□□□□ -1.38
CDC42BPB-207ENST00000560492 A0A1W2PNN7 141 aa6.42□□□□□ -1.38
CDC42BPB-207ENST00000560492 I3L3M4 83 aa6.42□□□□□ -1.38
CDC42BPB-207ENST00000560492 RAB4AP20338 218 aa6.42□□□□□ -1.38
CDC42BPB-207ENST00000560492 C9orf116Q5BN46 136 aaPredicted RBP6.42□□□□□ -1.38
CDC42BPB-207ENST00000560492 CD164L2Q6UWJ8 174 aa6.42□□□□□ -1.38
CDC42BPB-207ENST00000560492 PHF5AQ7RTV0 110 aaKnown RBP6.42□□□□□ -1.38
CDC42BPB-207ENST00000560492 DIRC1Q969H9 104 aa6.42□□□□□ -1.38
CDC42BPB-207ENST00000560492 PRELID3AQ96N28 172 aa6.42□□□□□ -1.38
CDC42BPB-207ENST00000560492 SMKR1H3BMG3 65 aa6.41□□□□□ -1.38
CDC42BPB-207ENST00000560492 COX7A2LO14548 114 aa6.41□□□□□ -1.38
CDC42BPB-207ENST00000560492 ALKBH7Q9BT30 221 aaPredicted RBP6.41□□□□□ -1.38
CDC42BPB-207ENST00000560492 LAMTOR2Q9Y2Q5 125 aa6.41□□□□□ -1.38
CDC42BPB-207ENST00000560492 A0A087WZ39 114 aa6.4□□□□□ -1.38
CDC42BPB-207ENST00000560492 APOMO95445 188 aa6.4□□□□□ -1.38
CDC42BPB-207ENST00000560492 PPP1R17O96001 155 aa6.4□□□□□ -1.38
CDC42BPB-207ENST00000560492 S100A2P29034 98 aa6.4□□□□□ -1.38
CDC42BPB-207ENST00000560492 UBE2D1P51668 147 aa6.4□□□□□ -1.38
CDC42BPB-207ENST00000560492 OPRPNQ99935 248 aaPredicted RBP6.4□□□□□ -1.38
CDC42BPB-207ENST00000560492 MAP1LC3AQ9H492 121 aa6.4□□□□□ -1.38
CDC42BPB-207ENST00000560492 ST20Q9HBF5 79 aa6.4□□□□□ -1.38
CDC42BPB-207ENST00000560492 SNRPEP62304 92 aaKnown RBP6.39□□□□□ -1.39
CDC42BPB-207ENST00000560492 FA2HQ7L5A8 372 aa6.39□□□□□ -1.39
CDC42BPB-207ENST00000560492 C18orf32Q8TCD1 76 aa6.39□□□□□ -1.39
CDC42BPB-207ENST00000560492 TRAV13-1A0A0B4J241 112 aa6.38□□□□□ -1.39
CDC42BPB-207ENST00000560492 LOC389332A0A1B0GUA5 103 aa6.38□□□□□ -1.39
CDC42BPB-207ENST00000560492 SERF1AO75920 110 aa6.38□□□□□ -1.39
CDC42BPB-207ENST00000560492 TNFRSF6BO95407 300 aa6.38□□□□□ -1.39
CDC42BPB-207ENST00000560492 TSHBP01222 138 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms