RNA–Protein interactions for RNA: ENST00000560448.5

PKNOX1-209, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-209ENST00000560448 C1orf43Q9BWL3 253 aa9.35□□□□□ -0.91
PKNOX1-209ENST00000560448 CHTOPQ9Y3Y2 248 aaKnown RBP9.35□□□□□ -0.91
PKNOX1-209ENST00000560448 DNAH17Q9UFH2 4485 aa9.35□□□□□ -0.91
PKNOX1-209ENST00000560448 COX8AP10176 69 aa9.34□□□□□ -0.91
PKNOX1-209ENST00000560448 MRPL52Q86TS9 123 aaKnown RBP9.34□□□□□ -0.91
PKNOX1-209ENST00000560448 TMEM101Q96IK0 257 aa9.34□□□□□ -0.91
PKNOX1-209ENST00000560448 PYGO1Q9Y3Y4 419 aa9.34□□□□□ -0.91
PKNOX1-209ENST00000560448 CSDC2Q9Y534 153 aaKnown RBP9.34□□□□□ -0.91
PKNOX1-209ENST00000560448 A0A087WTM6 91 aa9.33□□□□□ -0.92
PKNOX1-209ENST00000560448 FGF6P10767 208 aa9.33□□□□□ -0.92
PKNOX1-209ENST00000560448 PLNP26678 52 aa9.33□□□□□ -0.92
PKNOX1-209ENST00000560448 REG3AQ06141 175 aa9.33□□□□□ -0.92
PKNOX1-209ENST00000560448 PMVKQ15126 192 aa9.33□□□□□ -0.92
PKNOX1-209ENST00000560448 ENHOQ6UWT2 76 aa9.33□□□□□ -0.92
PKNOX1-209ENST00000560448 FAM104AQ969W3 186 aa9.33□□□□□ -0.92
PKNOX1-209ENST00000560448 CST9LQ9H4G1 147 aa9.33□□□□□ -0.92
PKNOX1-209ENST00000560448 IGKV2D-24A0A075B6R9 120 aa9.32□□□□□ -0.92
PKNOX1-209ENST00000560448 HNRNPA3P51991 378 aaKnown RBP9.32□□□□□ -0.92
PKNOX1-209ENST00000560448 CTAG1AP78358 180 aa9.32□□□□□ -0.92
PKNOX1-209ENST00000560448 SLC25A34Q6PIV7 304 aa9.32□□□□□ -0.92
PKNOX1-209ENST00000560448 LINC00269Q8N2A0 174 aa9.32□□□□□ -0.92
PKNOX1-209ENST00000560448 SNHG12Q9BXW3 62 aa9.32□□□□□ -0.92
PKNOX1-209ENST00000560448 PGPEP1Q9NXJ5 209 aa9.32□□□□□ -0.92
PKNOX1-209ENST00000560448 TP73-AS1Q9UF72 201 aa9.32□□□□□ -0.92
PKNOX1-209ENST00000560448 IGLV4-69A0A075B6H9 119 aa9.31□□□□□ -0.92
PKNOX1-209ENST00000560448 NPSP0C0P6 89 aa9.31□□□□□ -0.92
PKNOX1-209ENST00000560448 ZC2HC1BQ5TFG8 222 aa9.31□□□□□ -0.92
PKNOX1-209ENST00000560448 OPRPNQ99935 248 aaPredicted RBP9.31□□□□□ -0.92
PKNOX1-209ENST00000560448 TIMM21Q9BVV7 248 aa9.31□□□□□ -0.92
PKNOX1-209ENST00000560448 IGLV4-60A0A075B6I1 120 aa9.31□□□□□ -0.92
PKNOX1-209ENST00000560448 IGLV4-3A0A075B6K6 122 aa9.31□□□□□ -0.92
PKNOX1-209ENST00000560448 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.31□□□□□ -0.92
PKNOX1-209ENST00000560448 IGKV2-29A2NJV5 120 aaPredicted RBP9.31□□□□□ -0.92
PKNOX1-209ENST00000560448 LRCOL1A6NCL2 159 aa9.31□□□□□ -0.92
PKNOX1-209ENST00000560448 M0R143 59 aa9.31□□□□□ -0.92
PKNOX1-209ENST00000560448 DLEU1O43261 78 aa9.31□□□□□ -0.92
PKNOX1-209ENST00000560448 BOD1L2Q8IYS8 172 aa9.31□□□□□ -0.92
PKNOX1-209ENST00000560448 OR5A1Q8NGJ0 315 aa9.31□□□□□ -0.92
PKNOX1-209ENST00000560448 NTN5Q8WTR8 489 aaPredicted RBP9.31□□□□□ -0.92
PKNOX1-209ENST00000560448 IGKV2D-26A0A0A0MRZ7 120 aa9.3□□□□□ -0.92
PKNOX1-209ENST00000560448 C14orf177Q52M58 125 aa9.3□□□□□ -0.92
PKNOX1-209ENST00000560448 DGAT2L7PQ6IED9 249 aa9.3□□□□□ -0.92
PKNOX1-209ENST00000560448 UBE2D4Q9Y2X8 147 aa9.3□□□□□ -0.92
PKNOX1-209ENST00000560448 HECTD4Q9Y4D8 3996 aa9.29□□□□□ -0.92
PKNOX1-209ENST00000560448 CCL25O15444 150 aa9.29□□□□□ -0.92
PKNOX1-209ENST00000560448 AMELXQ99217 191 aa9.29□□□□□ -0.92
PKNOX1-209ENST00000560448 SPANXA1Q9NS26 97 aa9.29□□□□□ -0.92
PKNOX1-209ENST00000560448 C11orf86A6NJI1 115 aa9.28□□□□□ -0.92
PKNOX1-209ENST00000560448 LBHQ53QV2 105 aaPredicted RBP9.28□□□□□ -0.92
PKNOX1-209ENST00000560448 PAPPA-AS1Q5QFB9 102 aa9.28□□□□□ -0.92
PKNOX1-209ENST00000560448 C2orf91Q6ZV80 131 aa9.28□□□□□ -0.92
PKNOX1-209ENST00000560448 PCP2Q8IVA1 136 aa9.28□□□□□ -0.92
PKNOX1-209ENST00000560448 Q8N814 137 aa9.28□□□□□ -0.92
PKNOX1-209ENST00000560448 C2orf88Q9BSF0 95 aa9.28□□□□□ -0.92
PKNOX1-209ENST00000560448 CDC42SE2Q9NRR3 84 aa9.28□□□□□ -0.92
PKNOX1-209ENST00000560448 NMUP48645 174 aa9.26□□□□□ -0.93
PKNOX1-209ENST00000560448 VCX2Q9H322 139 aa9.26□□□□□ -0.93
PKNOX1-209ENST00000560448 C16orf90A8MZG2 172 aa9.25□□□□□ -0.93
PKNOX1-209ENST00000560448 MRPS36P82909 103 aaKnown RBP9.25□□□□□ -0.93
PKNOX1-209ENST00000560448 CLPSL2Q6UWE3 100 aa9.25□□□□□ -0.93
PKNOX1-209ENST00000560448 E9PLD3 99 aa9.24□□□□□ -0.93
PKNOX1-209ENST00000560448 MAPKAPK5-AS1Q8N8E1 139 aa9.24□□□□□ -0.93
PKNOX1-209ENST00000560448 PKD1P98161 4303 aa9.23□□□□□ -0.93
PKNOX1-209ENST00000560448 SS18Q15532 418 aa9.23□□□□□ -0.93
PKNOX1-209ENST00000560448 KRTAP26-1Q6PEX3 210 aa9.23□□□□□ -0.93
PKNOX1-209ENST00000560448 Q6ZUT4 128 aa9.23□□□□□ -0.93
PKNOX1-209ENST00000560448 TTTY13Q9BZ97 58 aa9.23□□□□□ -0.93
PKNOX1-209ENST00000560448 KRTAP10-2P60368 255 aa9.22□□□□□ -0.93
PKNOX1-209ENST00000560448 IGLV10-54A0A075B6I4 117 aa9.22□□□□□ -0.93
PKNOX1-209ENST00000560448 A0A0J9YXV3 536 aa9.22□□□□□ -0.93
PKNOX1-209ENST00000560448 LINC00959A0A1B0GUT2 108 aa9.22□□□□□ -0.93
PKNOX1-209ENST00000560448 ZNF22P17026 224 aaPredicted RBP9.22□□□□□ -0.93
PKNOX1-209ENST00000560448 HINT1P49773 126 aaPredicted RBP9.22□□□□□ -0.93
PKNOX1-209ENST00000560448 CFAP161Q6P656 301 aa9.22□□□□□ -0.93
PKNOX1-209ENST00000560448 CHAC1Q9BUX1 264 aa9.22□□□□□ -0.93
PKNOX1-209ENST00000560448 HIGD1BQ9P298 99 aa9.22□□□□□ -0.93
PKNOX1-209ENST00000560448 PKHD1P08F94 4074 aa9.21□□□□□ -0.94
PKNOX1-209ENST00000560448 IGLV5-52A0A0A0MRZ9 124 aa9.21□□□□□ -0.94
PKNOX1-209ENST00000560448 RNASE13Q5GAN3 156 aaKnown RBP9.21□□□□□ -0.94
PKNOX1-209ENST00000560448 CHCHD10Q8WYQ3 142 aaPredicted RBP9.21□□□□□ -0.94
PKNOX1-209ENST00000560448 IGKV3OR2-268A0A0C4DH90 116 aa9.2□□□□□ -0.94
PKNOX1-209ENST00000560448 TMEM223A0PJW6 202 aa9.2□□□□□ -0.94
PKNOX1-209ENST00000560448 USP17L23D6RBM5 183 aa9.2□□□□□ -0.94
PKNOX1-209ENST00000560448 BVES-AS1Q5T3Y7 98 aa9.2□□□□□ -0.94
PKNOX1-209ENST00000560448 CD164L2Q6UWJ8 174 aa9.2□□□□□ -0.94
PKNOX1-209ENST00000560448 TINCRA0A1B0GVN0 87 aa9.19□□□□□ -0.94
PKNOX1-209ENST00000560448 UBE2D1P51668 147 aa9.19□□□□□ -0.94
PKNOX1-209ENST00000560448 HERVK_113P61574 105 aa9.19□□□□□ -0.94
PKNOX1-209ENST00000560448 WFDC2Q14508 124 aa9.19□□□□□ -0.94
PKNOX1-209ENST00000560448 BATFQ16520 125 aa9.19□□□□□ -0.94
PKNOX1-209ENST00000560448 TMEM170BQ5T4T1 132 aa9.19□□□□□ -0.94
PKNOX1-209ENST00000560448 FAM19A3Q7Z5A8 133 aa9.19□□□□□ -0.94
PKNOX1-209ENST00000560448 GAGE12HA6NDE8 117 aa9.18□□□□□ -0.94
PKNOX1-209ENST00000560448 GCSHP23434 173 aa9.18□□□□□ -0.94
PKNOX1-209ENST00000560448 DNAH11Q96DT5 4516 aa9.18□□□□□ -0.94
PKNOX1-209ENST00000560448 MYMXA0A1B0GTQ4 84 aa9.17□□□□□ -0.94
PKNOX1-209ENST00000560448 LECT2O14960 151 aa9.17□□□□□ -0.94
PKNOX1-209ENST00000560448 CDK2AP2O75956 126 aa9.17□□□□□ -0.94
PKNOX1-209ENST00000560448 COL5A1-AS1Q5SY13 56 aa9.17□□□□□ -0.94
PKNOX1-209ENST00000560448 IGLV5-45A0A087WSX0 123 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms