RNA–Protein interactions for RNA: ENST00000560316.1

HERC1-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-207ENST00000560316 IGHV3OR16-9A0A0B4J2B5 98 aa9.71□□□□□ -0.86
HERC1-207ENST00000560316 GATCO43716 136 aaKnown RBP9.71□□□□□ -0.86
HERC1-207ENST00000560316 RAB4AP20338 218 aa9.71□□□□□ -0.86
HERC1-207ENST00000560316 C9orf129Q5T035 196 aaKnown RBP9.71□□□□□ -0.86
HERC1-207ENST00000560316 FSIP2Q5CZC0 6907 aa9.7□□□□□ -0.86
HERC1-207ENST00000560316 TEX46H3BTG2 121 aa9.7□□□□□ -0.86
HERC1-207ENST00000560316 AMN1Q8IY45 258 aa9.7□□□□□ -0.86
HERC1-207ENST00000560316 TMEM191AQ9H0A3 160 aa9.7□□□□□ -0.86
HERC1-207ENST00000560316 A8MWL6 223 aa9.69□□□□□ -0.86
HERC1-207ENST00000560316 CRYGAP11844 174 aa9.68□□□□□ -0.86
HERC1-207ENST00000560316 FAM104AQ969W3 186 aa9.68□□□□□ -0.86
HERC1-207ENST00000560316 BORCS7Q96B45 105 aa9.68□□□□□ -0.86
HERC1-207ENST00000560316 KIR2DL4Q99706 377 aa9.68□□□□□ -0.86
HERC1-207ENST00000560316 TIMM21Q9BVV7 248 aa9.68□□□□□ -0.86
HERC1-207ENST00000560316 CTDSP1Q9GZU7 261 aa9.68□□□□□ -0.86
HERC1-207ENST00000560316 HMSDA8MTL9 139 aa9.67□□□□□ -0.86
HERC1-207ENST00000560316 SUMO2P61956 95 aaKnown RBP9.67□□□□□ -0.86
HERC1-207ENST00000560316 KIAA0087Q14695 138 aa9.67□□□□□ -0.86
HERC1-207ENST00000560316 TPRXLQ17RH7 258 aa9.67□□□□□ -0.86
HERC1-207ENST00000560316 NRACQ8N912 160 aa9.67□□□□□ -0.86
HERC1-207ENST00000560316 ANAPC11Q9NYG5 84 aa9.67□□□□□ -0.86
HERC1-207ENST00000560316 A0A1B0GUT8 65 aa9.66□□□□□ -0.86
HERC1-207ENST00000560316 NDUFC2-KCTD14E9PQ53 114 aa9.66□□□□□ -0.86
HERC1-207ENST00000560316 NUPR1O60356 82 aa9.66□□□□□ -0.86
HERC1-207ENST00000560316 RPL39P62891 51 aaKnown RBP9.66□□□□□ -0.86
HERC1-207ENST00000560316 C2orf82Q6UX34 121 aa9.66□□□□□ -0.86
HERC1-207ENST00000560316 TMEM18Q96B42 140 aa9.66□□□□□ -0.86
HERC1-207ENST00000560316 FAM231DQ6ZW35 169 aa9.65□□□□□ -0.86
HERC1-207ENST00000560316 IGLV7-46A0A075B6I9 117 aa9.64□□□□□ -0.87
HERC1-207ENST00000560316 TRBV30A0A0K0K1B3 111 aa9.64□□□□□ -0.87
HERC1-207ENST00000560316 HIGD1CA8MV81 97 aa9.64□□□□□ -0.87
HERC1-207ENST00000560316 C22orf24Q9Y442 160 aa9.64□□□□□ -0.87
HERC1-207ENST00000560316 IFITM10A6NMD0 228 aa9.63□□□□□ -0.87
HERC1-207ENST00000560316 KRTAP13-2Q52LG2 175 aa9.63□□□□□ -0.87
HERC1-207ENST00000560316 CT83Q5H943 113 aa9.63□□□□□ -0.87
HERC1-207ENST00000560316 PPP1R17O96001 155 aa9.62□□□□□ -0.87
HERC1-207ENST00000560316 RPL28P46779 137 aaKnown RBP9.62□□□□□ -0.87
HERC1-207ENST00000560316 LINC00469Q8N7U9 141 aa9.62□□□□□ -0.87
HERC1-207ENST00000560316 PACRGQ96M98 296 aaPredicted RBP9.62□□□□□ -0.87
HERC1-207ENST00000560316 TGIF2-C20orf24A0A0A6YYL0 155 aa9.61□□□□□ -0.87
HERC1-207ENST00000560316 HBBP68871 147 aa9.61□□□□□ -0.87
HERC1-207ENST00000560316 LINC00173Q6ZV60 143 aa9.61□□□□□ -0.87
HERC1-207ENST00000560316 PPP1R2P9O14990 202 aa9.6□□□□□ -0.87
HERC1-207ENST00000560316 LINC00242Q5T6M2 205 aa9.6□□□□□ -0.87
HERC1-207ENST00000560316 LINC00304Q8N9R0 145 aa9.6□□□□□ -0.87
HERC1-207ENST00000560316 SPANXA1Q9NS26 97 aa9.6□□□□□ -0.87
HERC1-207ENST00000560316 BCE1O60756 84 aa9.59□□□□□ -0.87
HERC1-207ENST00000560316 LINC01547P58512 204 aaPredicted RBP9.59□□□□□ -0.87
HERC1-207ENST00000560316 MRPS36P82909 103 aaKnown RBP9.59□□□□□ -0.87
HERC1-207ENST00000560316 LBHQ53QV2 105 aaPredicted RBP9.59□□□□□ -0.87
HERC1-207ENST00000560316 TAGLN2P37802 199 aaKnown RBP9.58□□□□□ -0.88
HERC1-207ENST00000560316 MRPL51Q4U2R6 128 aaKnown RBP9.58□□□□□ -0.88
HERC1-207ENST00000560316 XAGE1AQ9HD64 81 aa9.58□□□□□ -0.88
HERC1-207ENST00000560316 ZNF727A8MUV8 499 aa9.57□□□□□ -0.88
HERC1-207ENST00000560316 RIGQ13278 110 aa9.56□□□□□ -0.88
HERC1-207ENST00000560316 PPDPFQ9H3Y8 114 aa9.56□□□□□ -0.88
HERC1-207ENST00000560316 CEBPGP53567 150 aa9.55□□□□□ -0.88
HERC1-207ENST00000560316 MRPL55Q7Z7F7 128 aaKnown RBP9.55□□□□□ -0.88
HERC1-207ENST00000560316 C20orf78Q9BR46 151 aa9.55□□□□□ -0.88
HERC1-207ENST00000560316 TMEM250H0YL14 139 aa9.54□□□□□ -0.88
HERC1-207ENST00000560316 FAM104BQ5XKR9 115 aa9.54□□□□□ -0.88
HERC1-207ENST00000560316 RPL37AP8A6NKH3 93 aa9.53□□□□□ -0.88
HERC1-207ENST00000560316 TCAPO15273 167 aa9.53□□□□□ -0.88
HERC1-207ENST00000560316 RPL32P62910 135 aaKnown RBP9.53□□□□□ -0.88
HERC1-207ENST00000560316 SMIM2Q9BVW6 85 aa9.53□□□□□ -0.88
HERC1-207ENST00000560316 TP73-AS1Q9UF72 201 aa9.53□□□□□ -0.88
HERC1-207ENST00000560316 TRBV24-1A0A075B6N3 115 aa9.52□□□□□ -0.89
HERC1-207ENST00000560316 RGS21Q2M5E4 152 aa9.52□□□□□ -0.89
HERC1-207ENST00000560316 FAM229BQ4G0N7 80 aa9.52□□□□□ -0.89
HERC1-207ENST00000560316 LINC01551Q86U37 167 aa9.52□□□□□ -0.89
HERC1-207ENST00000560316 KRTAP4-1Q9BYQ7 146 aa9.52□□□□□ -0.89
HERC1-207ENST00000560316 TOMM7Q9P0U1 55 aa9.52□□□□□ -0.89
HERC1-207ENST00000560316 TNFRSF6BO95407 300 aa9.51□□□□□ -0.89
HERC1-207ENST00000560316 PRSS2P07478 247 aa9.51□□□□□ -0.89
HERC1-207ENST00000560316 CKS2P33552 79 aa9.51□□□□□ -0.89
HERC1-207ENST00000560316 CKS1BP61024 79 aa9.51□□□□□ -0.89
HERC1-207ENST00000560316 SRSF3P84103 164 aaKnown RBP9.51□□□□□ -0.89
HERC1-207ENST00000560316 LINC00167Q96N53 147 aa9.51□□□□□ -0.89
HERC1-207ENST00000560316 OSTCQ9NRP0 149 aa9.51□□□□□ -0.89
HERC1-207ENST00000560316 IGLV4-3A0A075B6K6 122 aa9.5□□□□□ -0.89
HERC1-207ENST00000560316 IGKV2D-26A0A0A0MRZ7 120 aa9.5□□□□□ -0.89
HERC1-207ENST00000560316 LINC00862A6NCI5 91 aa9.5□□□□□ -0.89
HERC1-207ENST00000560316 IFI27P40305 119 aaPredicted RBP9.5□□□□□ -0.89
HERC1-207ENST00000560316 V9GYV3 84 aa9.5□□□□□ -0.89
HERC1-207ENST00000560316 GAGE10A6NGK3 116 aa9.49□□□□□ -0.89
HERC1-207ENST00000560316 UBE2AP49459 152 aa9.49□□□□□ -0.89
HERC1-207ENST00000560316 KRTAP13-1Q8IUC0 172 aa9.49□□□□□ -0.89
HERC1-207ENST00000560316 LINC01561Q8N1V8 128 aa9.49□□□□□ -0.89
HERC1-207ENST00000560316 C6orf226Q5I0X4 101 aa9.48□□□□□ -0.89
HERC1-207ENST00000560316 SMIM7Q9BQ49 75 aa9.48□□□□□ -0.89
HERC1-207ENST00000560316 D6R8Y8 96 aa9.47□□□□□ -0.89
HERC1-207ENST00000560316 NPYP01303 97 aa9.47□□□□□ -0.89
HERC1-207ENST00000560316 ASB16-AS1Q495Z4 193 aa9.47□□□□□ -0.89
HERC1-207ENST00000560316 ZC2HC1BQ5TFG8 222 aa9.47□□□□□ -0.89
HERC1-207ENST00000560316 TMEM141Q96I45 108 aa9.47□□□□□ -0.89
HERC1-207ENST00000560316 Q6ZN92 141 aa9.46□□□□□ -0.9
HERC1-207ENST00000560316 LINC00337Q8N6G1 96 aa9.46□□□□□ -0.9
HERC1-207ENST00000560316 NAT8BQ9UHF3 227 aa9.46□□□□□ -0.9
HERC1-207ENST00000560316 PYGO1Q9Y3Y4 419 aa9.46□□□□□ -0.9
HERC1-207ENST00000560316 CTAG1AP78358 180 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 104.5 ms