RNA–Protein interactions for RNA: ENST00000560163.1

RABGGTA-214, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 877 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-214ENST00000560163 PRR4Q16378 134 aa11.91□□□□□ -0.5
RABGGTA-214ENST00000560163 IGLV1-50A0A075B6I6 118 aa11.9□□□□□ -0.5
RABGGTA-214ENST00000560163 H0Y9J4 135 aa11.9□□□□□ -0.5
RABGGTA-214ENST00000560163 KRTAP1-4P0C5Y4 121 aa11.9□□□□□ -0.5
RABGGTA-214ENST00000560163 MRPL54Q6P161 138 aaKnown RBP11.9□□□□□ -0.5
RABGGTA-214ENST00000560163 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.89□□□□□ -0.51
RABGGTA-214ENST00000560163 GNB1LQ9BYB4 327 aa11.89□□□□□ -0.51
RABGGTA-214ENST00000560163 SDHAF1A6NFY7 115 aa11.88□□□□□ -0.51
RABGGTA-214ENST00000560163 APOMO95445 188 aa11.88□□□□□ -0.51
RABGGTA-214ENST00000560163 ESDP10768 282 aa11.88□□□□□ -0.51
RABGGTA-214ENST00000560163 SS18Q15532 418 aa11.88□□□□□ -0.51
RABGGTA-214ENST00000560163 TWIST1Q15672 202 aa11.88□□□□□ -0.51
RABGGTA-214ENST00000560163 CDC42SE2Q9NRR3 84 aa11.88□□□□□ -0.51
RABGGTA-214ENST00000560163 RAB5AP20339 215 aa11.87□□□□□ -0.51
RABGGTA-214ENST00000560163 KRTAP11-1Q8IUC1 163 aa11.87□□□□□ -0.51
RABGGTA-214ENST00000560163 TMEM101Q96IK0 257 aa11.87□□□□□ -0.51
RABGGTA-214ENST00000560163 TMEM191AQ9H0A3 160 aa11.87□□□□□ -0.51
RABGGTA-214ENST00000560163 TMEM136Q6ZRR5 245 aa11.86□□□□□ -0.51
RABGGTA-214ENST00000560163 I3L3M4 83 aa11.85□□□□□ -0.51
RABGGTA-214ENST00000560163 MRPL52Q86TS9 123 aaKnown RBP11.85□□□□□ -0.51
RABGGTA-214ENST00000560163 SMIM15Q7Z3B0 74 aa11.84□□□□□ -0.51
RABGGTA-214ENST00000560163 C2orf48Q96LS8 159 aa11.84□□□□□ -0.51
RABGGTA-214ENST00000560163 CAMK2N2Q96S95 79 aa11.84□□□□□ -0.51
RABGGTA-214ENST00000560163 TRBV6-5A0A0K0K1A5 114 aa11.83□□□□□ -0.52
RABGGTA-214ENST00000560163 TSHBP01222 138 aa11.83□□□□□ -0.52
RABGGTA-214ENST00000560163 PMCHP20382 165 aa11.82□□□□□ -0.52
RABGGTA-214ENST00000560163 RPL18AQ02543 176 aaKnown RBP11.82□□□□□ -0.52
RABGGTA-214ENST00000560163 FAM104BQ5XKR9 115 aa11.82□□□□□ -0.52
RABGGTA-214ENST00000560163 OPRPNQ99935 248 aaPredicted RBP11.82□□□□□ -0.52
RABGGTA-214ENST00000560163 A0A087WZ39 114 aa11.81□□□□□ -0.52
RABGGTA-214ENST00000560163 COX7A2LO14548 114 aa11.81□□□□□ -0.52
RABGGTA-214ENST00000560163 RNF151Q2KHN1 245 aa11.81□□□□□ -0.52
RABGGTA-214ENST00000560163 C1orf196B1AJZ1 125 aa11.8□□□□□ -0.52
RABGGTA-214ENST00000560163 MALP21145 153 aa11.8□□□□□ -0.52
RABGGTA-214ENST00000560163 MRAP2Q96G30 205 aa11.8□□□□□ -0.52
RABGGTA-214ENST00000560163 TRAPPC1Q9Y5R8 145 aa11.8□□□□□ -0.52
RABGGTA-214ENST00000560163 RAB4AP20338 218 aa11.79□□□□□ -0.52
RABGGTA-214ENST00000560163 MRPL18Q9H0U6 180 aaKnown RBP11.79□□□□□ -0.52
RABGGTA-214ENST00000560163 FAM168BA1KXE4 195 aa11.78□□□□□ -0.52
RABGGTA-214ENST00000560163 RPL13AP40429 203 aaKnown RBP11.78□□□□□ -0.52
RABGGTA-214ENST00000560163 AMN1Q8IY45 258 aa11.78□□□□□ -0.52
RABGGTA-214ENST00000560163 PPBPP02775 128 aa11.76□□□□□ -0.53
RABGGTA-214ENST00000560163 TRGC2P03986 189 aa11.76□□□□□ -0.53
RABGGTA-214ENST00000560163 UBE2D1P51668 147 aa11.76□□□□□ -0.53
RABGGTA-214ENST00000560163 POLR2KP53803 58 aaKnown RBP11.76□□□□□ -0.53
RABGGTA-214ENST00000560163 FABP9Q0Z7S8 132 aa11.76□□□□□ -0.53
RABGGTA-214ENST00000560163 MRPL51Q4U2R6 128 aaKnown RBP11.76□□□□□ -0.53
RABGGTA-214ENST00000560163 KRTAP7-1Q8IUC3 87 aa11.75□□□□□ -0.53
RABGGTA-214ENST00000560163 TRBV27A0A0K0K1C4 114 aa11.74□□□□□ -0.53
RABGGTA-214ENST00000560163 C5orf38Q86SI9 138 aa11.74□□□□□ -0.53
RABGGTA-214ENST00000560163 ST20Q9HBF5 79 aa11.74□□□□□ -0.53
RABGGTA-214ENST00000560163 MRPL35Q9NZE8 188 aaKnown RBP11.74□□□□□ -0.53
RABGGTA-214ENST00000560163 CSDC2Q9Y534 153 aaKnown RBP11.74□□□□□ -0.53
RABGGTA-214ENST00000560163 ORMDL3Q8N138 153 aa11.73□□□□□ -0.53
RABGGTA-214ENST00000560163 LAMTOR2Q9Y2Q5 125 aa11.73□□□□□ -0.53
RABGGTA-214ENST00000560163 TLX1NBP0CAT3 122 aa11.72□□□□□ -0.53
RABGGTA-214ENST00000560163 SPAG11BQ08648 103 aa11.72□□□□□ -0.53
RABGGTA-214ENST00000560163 ALKBH7Q9BT30 221 aaPredicted RBP11.72□□□□□ -0.53
RABGGTA-214ENST00000560163 D6R8Y8 96 aa11.71□□□□□ -0.53
RABGGTA-214ENST00000560163 PPP1R17O96001 155 aa11.71□□□□□ -0.53
RABGGTA-214ENST00000560163 CKS2P33552 79 aa11.71□□□□□ -0.53
RABGGTA-214ENST00000560163 KIAA1644Q3SXP7 199 aa11.71□□□□□ -0.53
RABGGTA-214ENST00000560163 RNASE13Q5GAN3 156 aaKnown RBP11.71□□□□□ -0.53
RABGGTA-214ENST00000560163 UBE2D4Q9Y2X8 147 aa11.71□□□□□ -0.53
RABGGTA-214ENST00000560163 TRAV13-1A0A0B4J241 112 aa11.7□□□□□ -0.54
RABGGTA-214ENST00000560163 C10orf25Q5T742 122 aa11.7□□□□□ -0.54
RABGGTA-214ENST00000560163 NRACQ8N912 160 aa11.7□□□□□ -0.54
RABGGTA-214ENST00000560163 OR10D4PQ8NGN7 298 aa11.7□□□□□ -0.54
RABGGTA-214ENST00000560163 F8WDY8 70 aa11.69□□□□□ -0.54
RABGGTA-214ENST00000560163 FAM19A5Q7Z5A7 132 aaPredicted RBP11.69□□□□□ -0.54
RABGGTA-214ENST00000560163 PRELID3AQ96N28 172 aa11.69□□□□□ -0.54
RABGGTA-214ENST00000560163 HIST1H2BKO60814 126 aa11.68□□□□□ -0.54
RABGGTA-214ENST00000560163 TSPAN13O95857 204 aa11.68□□□□□ -0.54
RABGGTA-214ENST00000560163 HIST1H2BJP06899 126 aa11.68□□□□□ -0.54
RABGGTA-214ENST00000560163 HIST1H2BOP23527 126 aa11.68□□□□□ -0.54
RABGGTA-214ENST00000560163 HIST1H2BBP33778 126 aa11.68□□□□□ -0.54
RABGGTA-214ENST00000560163 HIST1H2BDP58876 126 aa11.68□□□□□ -0.54
RABGGTA-214ENST00000560163 HIST1H2BCP62807 126 aa11.68□□□□□ -0.54
RABGGTA-214ENST00000560163 HIST2H2BEQ16778 126 aa11.68□□□□□ -0.54
RABGGTA-214ENST00000560163 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.68□□□□□ -0.54
RABGGTA-214ENST00000560163 HIST1H2BHQ93079 126 aa11.68□□□□□ -0.54
RABGGTA-214ENST00000560163 HIST1H2BNQ99877 126 aa11.68□□□□□ -0.54
RABGGTA-214ENST00000560163 HIST1H2BMQ99879 126 aa11.68□□□□□ -0.54
RABGGTA-214ENST00000560163 PRSS47A8MTI9 375 aa11.67□□□□□ -0.54
RABGGTA-214ENST00000560163 SMKR1H3BMG3 65 aa11.67□□□□□ -0.54
RABGGTA-214ENST00000560163 TNFRSF6BO95407 300 aa11.67□□□□□ -0.54
RABGGTA-214ENST00000560163 RAB5BP61020 215 aa11.67□□□□□ -0.54
RABGGTA-214ENST00000560163 RPL32P62910 135 aaKnown RBP11.67□□□□□ -0.54
RABGGTA-214ENST00000560163 C20orf78Q9BR46 151 aa11.67□□□□□ -0.54
RABGGTA-214ENST00000560163 MUC17Q685J3 4493 aa11.67□□□□□ -0.54
RABGGTA-214ENST00000560163 NPYP01303 97 aa11.66□□□□□ -0.54
RABGGTA-214ENST00000560163 UNQ6190/PRO20217Q6UXQ8 127 aa11.65□□□□□ -0.54
RABGGTA-214ENST00000560163 C18orf32Q8TCD1 76 aa11.65□□□□□ -0.54
RABGGTA-214ENST00000560163 C6orf48Q9UBA6 75 aa11.65□□□□□ -0.54
RABGGTA-214ENST00000560163 IGHV3OR16-9A0A0B4J2B5 98 aa11.64□□□□□ -0.55
RABGGTA-214ENST00000560163 M0QXV9 152 aa11.64□□□□□ -0.55
RABGGTA-214ENST00000560163 VCYO14598 125 aa11.64□□□□□ -0.55
RABGGTA-214ENST00000560163 NDUFA1O15239 70 aa11.64□□□□□ -0.55
RABGGTA-214ENST00000560163 Q6ZUT4 128 aa11.64□□□□□ -0.55
RABGGTA-214ENST00000560163 ORAOV1Q8WV07 137 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms