RNA–Protein interactions for RNA: ENST00000560131.1

TPM1-222, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 537 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-222ENST00000560131 PRO3102Q9H379 93 aa3.65□□□□□ -1.83
TPM1-222ENST00000560131 XCL2Q9UBD3 114 aa3.65□□□□□ -1.83
TPM1-222ENST00000560131 ABCA4P78363 2273 aa3.65□□□□□ -1.83
TPM1-222ENST00000560131 REV3LO60673 3130 aa3.65□□□□□ -1.83
TPM1-222ENST00000560131 LAMA3Q16787 3333 aa3.64□□□□□ -1.83
TPM1-222ENST00000560131 IGKV2-28A0A075B6P5 120 aa3.64□□□□□ -1.83
TPM1-222ENST00000560131 IGKV3D-7A0A0C4DH55 119 aa3.64□□□□□ -1.83
TPM1-222ENST00000560131 TRBV10-1A0A0K0K1A3 114 aa3.64□□□□□ -1.83
TPM1-222ENST00000560131 IBA57-AS1B1ANH7 110 aa3.64□□□□□ -1.83
TPM1-222ENST00000560131 H3BQ85 93 aa3.64□□□□□ -1.83
TPM1-222ENST00000560131 ERC2-IT1O76042 136 aa3.64□□□□□ -1.83
TPM1-222ENST00000560131 IGKV2D-28P01615 120 aa3.64□□□□□ -1.83
TPM1-222ENST00000560131 TRBV12-3P01733 135 aa3.64□□□□□ -1.83
TPM1-222ENST00000560131 LINC00337Q8N6G1 96 aa3.64□□□□□ -1.83
TPM1-222ENST00000560131 Q8NBF4 154 aa3.64□□□□□ -1.83
TPM1-222ENST00000560131 C14orf132Q9NPU4 83 aa3.64□□□□□ -1.83
TPM1-222ENST00000560131 ORMDL1Q9P0S3 153 aa3.64□□□□□ -1.83
TPM1-222ENST00000560131 CEP290O15078 2479 aa3.63□□□□□ -1.83
TPM1-222ENST00000560131 RPL37AP8A6NKH3 93 aa3.63□□□□□ -1.83
TPM1-222ENST00000560131 KNCNA6PVL3 124 aa3.63□□□□□ -1.83
TPM1-222ENST00000560131 TMEM256-PLSCR3K7ERE1 68 aa3.63□□□□□ -1.83
TPM1-222ENST00000560131 DEFB1P60022 68 aa3.63□□□□□ -1.83
TPM1-222ENST00000560131 COX6A2Q02221 97 aa3.63□□□□□ -1.83
TPM1-222ENST00000560131 SS18Q15532 418 aa3.63□□□□□ -1.83
TPM1-222ENST00000560131 LPAL2Q16609 132 aa3.63□□□□□ -1.83
TPM1-222ENST00000560131 C9orf66Q5T8R8 295 aa3.63□□□□□ -1.83
TPM1-222ENST00000560131 SMIM11BQ8TCY0 68 aa3.63□□□□□ -1.83
TPM1-222ENST00000560131 C16orf95Q9H693 158 aa3.63□□□□□ -1.83
TPM1-222ENST00000560131 SND1-IT1Q9HBX3 110 aa3.63□□□□□ -1.83
TPM1-222ENST00000560131 PKDREJQ9NTG1 2253 aa3.62□□□□□ -1.83
TPM1-222ENST00000560131 A0A087WVE0 104 aa3.62□□□□□ -1.83
TPM1-222ENST00000560131 LOC110117498A0A087WWA1 95 aa3.62□□□□□ -1.83
TPM1-222ENST00000560131 A0A087WYN8 130 aa3.62□□□□□ -1.83
TPM1-222ENST00000560131 IGKV2-29A2NJV5 120 aaPredicted RBP3.62□□□□□ -1.83
TPM1-222ENST00000560131 J3QLI3 93 aa3.62□□□□□ -1.83
TPM1-222ENST00000560131 PDE6GP18545 87 aa3.62□□□□□ -1.83
TPM1-222ENST00000560131 TMEM86BQ8N661 226 aa3.62□□□□□ -1.83
TPM1-222ENST00000560131 UBL5Q9BZL1 73 aa3.62□□□□□ -1.83
TPM1-222ENST00000560131 CDH23Q9H251 3354 aa3.62□□□□□ -1.83
TPM1-222ENST00000560131 WDR87Q6ZQQ6 2873 aa3.62□□□□□ -1.83
TPM1-222ENST00000560131 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.61□□□□□ -1.83
TPM1-222ENST00000560131 TRBV6-4A0A1B0GX49 114 aa3.61□□□□□ -1.83
TPM1-222ENST00000560131 A6NDX4 124 aa3.61□□□□□ -1.83
TPM1-222ENST00000560131 CXCL6P80162 114 aa3.61□□□□□ -1.83
TPM1-222ENST00000560131 SPINK13Q1W4C9 94 aa3.61□□□□□ -1.83
TPM1-222ENST00000560131 C9orf129Q5T035 196 aaKnown RBP3.61□□□□□ -1.83
TPM1-222ENST00000560131 KRTAP5-1Q6L8H4 278 aa3.61□□□□□ -1.83
TPM1-222ENST00000560131 LINC00336Q6ZUF6 198 aa3.61□□□□□ -1.83
TPM1-222ENST00000560131 C11orf72Q8NBR9 251 aa3.61□□□□□ -1.83
TPM1-222ENST00000560131 C10orf105Q8TEF2 133 aa3.61□□□□□ -1.83
TPM1-222ENST00000560131 COX7B2Q8TF08 81 aa3.61□□□□□ -1.83
TPM1-222ENST00000560131 DEFB104AQ8WTQ1 72 aa3.61□□□□□ -1.83
TPM1-222ENST00000560131 CDC42SE2Q9NRR3 84 aa3.61□□□□□ -1.83
TPM1-222ENST00000560131 LAMTOR3Q9UHA4 124 aa3.61□□□□□ -1.83
TPM1-222ENST00000560131 CACNA1BQ00975 2339 aa3.61□□□□□ -1.83
TPM1-222ENST00000560131 SPTBN5Q9NRC6 3674 aaKnown RBP3.61□□□□□ -1.83
TPM1-222ENST00000560131 POLEQ07864 2286 aa3.6□□□□□ -1.83
TPM1-222ENST00000560131 LECT2O14960 151 aa3.6□□□□□ -1.83
TPM1-222ENST00000560131 CCL18P55774 89 aa3.6□□□□□ -1.83
TPM1-222ENST00000560131 HILS1P60008 231 aa3.6□□□□□ -1.83
TPM1-222ENST00000560131 LMO4P61968 165 aa3.6□□□□□ -1.83
TPM1-222ENST00000560131 BLCAPP62952 87 aa3.6□□□□□ -1.83
TPM1-222ENST00000560131 RNASE13Q5GAN3 156 aaKnown RBP3.6□□□□□ -1.83
TPM1-222ENST00000560131 C18orf65Q6ZTR6 163 aa3.6□□□□□ -1.83
TPM1-222ENST00000560131 FP248Q71RG6 208 aaPredicted RBP3.6□□□□□ -1.83
TPM1-222ENST00000560131 C20orf197Q8N268 126 aa3.6□□□□□ -1.83
TPM1-222ENST00000560131 MIR7-3HGQ8N6C7 128 aa3.6□□□□□ -1.83
TPM1-222ENST00000560131 MUC7Q8TAX7 377 aa3.6□□□□□ -1.83
TPM1-222ENST00000560131 LAMA2P24043 3122 aaKnown RBP3.6□□□□□ -1.83
TPM1-222ENST00000560131 ROS1P08922 2347 aa3.6□□□□□ -1.83
TPM1-222ENST00000560131 NCR3O14931 201 aa3.59□□□□□ -1.83
TPM1-222ENST00000560131 REG3GQ6UW15 175 aa3.59□□□□□ -1.83
TPM1-222ENST00000560131 Q8N814 137 aa3.59□□□□□ -1.83
TPM1-222ENST00000560131 CSNK1G2-AS1Q8NCQ2 148 aa3.59□□□□□ -1.83
TPM1-222ENST00000560131 LINC01560Q8TB33 94 aa3.59□□□□□ -1.83
TPM1-222ENST00000560131 USP34Q70CQ2 3546 aa3.59□□□□□ -1.84
TPM1-222ENST00000560131 LOC100131303A0A0U1RQF7 123 aa3.58□□□□□ -1.84
TPM1-222ENST00000560131 IGHV3-11P01762 117 aa3.58□□□□□ -1.84
TPM1-222ENST00000560131 ENHOQ6UWT2 76 aa3.58□□□□□ -1.84
TPM1-222ENST00000560131 Q6ZQT0 140 aa3.58□□□□□ -1.84
TPM1-222ENST00000560131 C1orf158Q8N1D5 194 aa3.58□□□□□ -1.84
TPM1-222ENST00000560131 C6orf223Q8N319 242 aa3.58□□□□□ -1.84
TPM1-222ENST00000560131 TRAV23DV6A0A075B6W5 121 aa3.57□□□□□ -1.84
TPM1-222ENST00000560131 IGHV3OR16-9A0A0B4J2B5 98 aa3.57□□□□□ -1.84
TPM1-222ENST00000560131 TRBV7-6A0A0J9YX20 115 aa3.57□□□□□ -1.84
TPM1-222ENST00000560131 TRBV7-4A0A0J9YYF1 115 aa3.57□□□□□ -1.84
TPM1-222ENST00000560131 LY6HO94772 140 aa3.57□□□□□ -1.84
TPM1-222ENST00000560131 KRTAP5-9P26371 169 aa3.57□□□□□ -1.84
TPM1-222ENST00000560131 COX17Q14061 63 aa3.57□□□□□ -1.84
TPM1-222ENST00000560131 NTM-AS1Q6ZSK4 140 aa3.57□□□□□ -1.84
TPM1-222ENST00000560131 FAM19A1Q7Z5A9 133 aa3.57□□□□□ -1.84
TPM1-222ENST00000560131 DOPEY2Q9Y3R5 2298 aa3.57□□□□□ -1.84
TPM1-222ENST00000560131 V9GYY9 64 aa3.57□□□□□ -1.84
TPM1-222ENST00000560131 SPTBN2O15020 2390 aa3.56□□□□□ -1.84
TPM1-222ENST00000560131 TPRP12270 2363 aaKnown RBP3.56□□□□□ -1.84
TPM1-222ENST00000560131 IGKV3-7A0A075B6H7 116 aa3.56□□□□□ -1.84
TPM1-222ENST00000560131 IGHV3-73A0A0B4J1V6 119 aa3.56□□□□□ -1.84
TPM1-222ENST00000560131 INSP01308 110 aa3.56□□□□□ -1.84
TPM1-222ENST00000560131 LINC00158P58513 81 aa3.56□□□□□ -1.84
TPM1-222ENST00000560131 RBM3P98179 157 aaKnown RBP3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms