RNA–Protein interactions for RNA: ENST00000560005.6

PSEN1-225, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-225ENST00000560005 CST9LQ9H4G1 147 aa13.88□□□□□ -0.19
PSEN1-225ENST00000560005 IGLV4-3A0A075B6K6 122 aa13.87□□□□□ -0.19
PSEN1-225ENST00000560005 IGKCP01834 107 aa13.87□□□□□ -0.19
PSEN1-225ENST00000560005 FGF6P10767 208 aa13.87□□□□□ -0.19
PSEN1-225ENST00000560005 C2orf88Q9BSF0 95 aa13.87□□□□□ -0.19
PSEN1-225ENST00000560005 OR5A1Q8NGJ0 315 aa13.86□□□□□ -0.19
PSEN1-225ENST00000560005 AMELXQ99217 191 aa13.86□□□□□ -0.19
PSEN1-225ENST00000560005 CHCHD5Q9BSY4 110 aa13.86□□□□□ -0.19
PSEN1-225ENST00000560005 HMCN2Q8NDA2 5059 aa13.86□□□□□ -0.19
PSEN1-225ENST00000560005 TSTD3H0UI37 97 aa13.85□□□□□ -0.19
PSEN1-225ENST00000560005 MRPL35Q9NZE8 188 aaKnown RBP13.85□□□□□ -0.19
PSEN1-225ENST00000560005 A0A096LPF7 62 aa13.84□□□□□ -0.19
PSEN1-225ENST00000560005 FAM229AH3BQW9 127 aa13.84□□□□□ -0.19
PSEN1-225ENST00000560005 DNAH10OSP0CZ25 163 aa13.84□□□□□ -0.19
PSEN1-225ENST00000560005 HAMPP81172 84 aa13.84□□□□□ -0.19
PSEN1-225ENST00000560005 ATOH7Q8N100 152 aa13.84□□□□□ -0.19
PSEN1-225ENST00000560005 PMCHL2Q9BQD1 86 aa13.84□□□□□ -0.19
PSEN1-225ENST00000560005 LELP1Q5T871 98 aa13.83□□□□□ -0.2
PSEN1-225ENST00000560005 A0A1B0GUV1 79 aa13.82□□□□□ -0.2
PSEN1-225ENST00000560005 SIVA1O15304 175 aa13.82□□□□□ -0.2
PSEN1-225ENST00000560005 SPATA45Q537H7 98 aa13.82□□□□□ -0.2
PSEN1-225ENST00000560005 ZNF664Q8N3J9 261 aa13.82□□□□□ -0.2
PSEN1-225ENST00000560005 PAM16Q9Y3D7 125 aa13.82□□□□□ -0.2
PSEN1-225ENST00000560005 A0A087WTM6 91 aa13.81□□□□□ -0.2
PSEN1-225ENST00000560005 SEC11AP67812 179 aa13.81□□□□□ -0.2
PSEN1-225ENST00000560005 OPRPNQ99935 248 aaPredicted RBP13.81□□□□□ -0.2
PSEN1-225ENST00000560005 GAGE6Q13070 117 aa13.8□□□□□ -0.2
PSEN1-225ENST00000560005 CDC42SE2Q9NRR3 84 aa13.8□□□□□ -0.2
PSEN1-225ENST00000560005 TRAV8-6A0A0B4J262 113 aa13.79□□□□□ -0.2
PSEN1-225ENST00000560005 TMEM262E9PQX1 116 aa13.79□□□□□ -0.2
PSEN1-225ENST00000560005 LYPD5Q6UWN5 251 aa13.79□□□□□ -0.2
PSEN1-225ENST00000560005 NFE4Q86UQ8 179 aa13.79□□□□□ -0.2
PSEN1-225ENST00000560005 DNAH8Q96JB1 4490 aa13.78□□□□□ -0.2
PSEN1-225ENST00000560005 IGLC3P0DOY3 106 aa13.78□□□□□ -0.2
PSEN1-225ENST00000560005 GCSHP23434 173 aa13.78□□□□□ -0.2
PSEN1-225ENST00000560005 Q6ZUT4 128 aa13.78□□□□□ -0.2
PSEN1-225ENST00000560005 FAM104AQ969W3 186 aa13.77□□□□□ -0.21
PSEN1-225ENST00000560005 hDV102S1A0JD36 115 aa13.76□□□□□ -0.21
PSEN1-225ENST00000560005 HERVK_113P61574 105 aa13.76□□□□□ -0.21
PSEN1-225ENST00000560005 IGLV4-69A0A075B6H9 119 aa13.75□□□□□ -0.21
PSEN1-225ENST00000560005 TINCRA0A1B0GVN0 87 aa13.75□□□□□ -0.21
PSEN1-225ENST00000560005 CCL25O15444 150 aa13.75□□□□□ -0.21
PSEN1-225ENST00000560005 ZC2HC1BQ5TFG8 222 aa13.75□□□□□ -0.21
PSEN1-225ENST00000560005 FAM19A3Q7Z5A8 133 aa13.75□□□□□ -0.21
PSEN1-225ENST00000560005 C11orf86A6NJI1 115 aa13.74□□□□□ -0.21
PSEN1-225ENST00000560005 CHAC1Q9BUX1 264 aa13.74□□□□□ -0.21
PSEN1-225ENST00000560005 GEMIN7Q9H840 131 aaKnown RBP13.74□□□□□ -0.21
PSEN1-225ENST00000560005 UBE2D1P51668 147 aa13.73□□□□□ -0.21
PSEN1-225ENST00000560005 RBX1P62877 108 aa13.73□□□□□ -0.21
PSEN1-225ENST00000560005 MAJINQ3KP22 176 aa13.73□□□□□ -0.21
PSEN1-225ENST00000560005 STPG4Q8N801 248 aa13.73□□□□□ -0.21
PSEN1-225ENST00000560005 PRO1933Q9H354 126 aa13.73□□□□□ -0.21
PSEN1-225ENST00000560005 UQCR10Q9UDW1 63 aa13.73□□□□□ -0.21
PSEN1-225ENST00000560005 A0A0J9YXV3 536 aa13.72□□□□□ -0.21
PSEN1-225ENST00000560005 HERVK_113P63121 156 aa13.72□□□□□ -0.21
PSEN1-225ENST00000560005 TMEM170BQ5T4T1 132 aa13.72□□□□□ -0.21
PSEN1-225ENST00000560005 RNASE13Q5GAN3 156 aaKnown RBP13.71□□□□□ -0.21
PSEN1-225ENST00000560005 MIEN1Q9BRT3 115 aa13.71□□□□□ -0.21
PSEN1-225ENST00000560005 H3BRM9 83 aa13.7□□□□□ -0.22
PSEN1-225ENST00000560005 LRP1Q07954 4544 aaKnown RBP13.7□□□□□ -0.22
PSEN1-225ENST00000560005 IGLV4-60A0A075B6I1 120 aa13.69□□□□□ -0.22
PSEN1-225ENST00000560005 KRTAP29-1A8MX34 341 aaPredicted RBP13.69□□□□□ -0.22
PSEN1-225ENST00000560005 MPV17L2Q567V2 206 aa13.69□□□□□ -0.22
PSEN1-225ENST00000560005 SLC25A34Q6PIV7 304 aa13.69□□□□□ -0.22
PSEN1-225ENST00000560005 PCP4L1A6NKN8 68 aa13.68□□□□□ -0.22
PSEN1-225ENST00000560005 E9PLD3 99 aa13.68□□□□□ -0.22
PSEN1-225ENST00000560005 COX8AP10176 69 aa13.68□□□□□ -0.22
PSEN1-225ENST00000560005 ANKRD39Q53RE8 183 aa13.68□□□□□ -0.22
PSEN1-225ENST00000560005 IGLV5-52A0A0A0MRZ9 124 aa13.67□□□□□ -0.22
PSEN1-225ENST00000560005 TRAV13-1A0A0B4J241 112 aa13.67□□□□□ -0.22
PSEN1-225ENST00000560005 DLEU1O43261 78 aa13.67□□□□□ -0.22
PSEN1-225ENST00000560005 ZNF22P17026 224 aaPredicted RBP13.67□□□□□ -0.22
PSEN1-225ENST00000560005 SS18Q15532 418 aa13.67□□□□□ -0.22
PSEN1-225ENST00000560005 IGLV5-45A0A087WSX0 123 aa13.66□□□□□ -0.22
PSEN1-225ENST00000560005 DDTP30046 118 aa13.66□□□□□ -0.22
PSEN1-225ENST00000560005 LINC00242Q5T6M2 205 aa13.66□□□□□ -0.22
PSEN1-225ENST00000560005 SERTAD4-AS1Q5TG53 156 aa13.66□□□□□ -0.22
PSEN1-225ENST00000560005 C14orf144Q96I85 54 aa13.66□□□□□ -0.22
PSEN1-225ENST00000560005 TMEM223A0PJW6 202 aa13.65□□□□□ -0.22
PSEN1-225ENST00000560005 ANGP03950 147 aaKnown RBP13.65□□□□□ -0.22
PSEN1-225ENST00000560005 NMUP48645 174 aa13.65□□□□□ -0.22
PSEN1-225ENST00000560005 LINC00469Q8N7U9 141 aa13.65□□□□□ -0.22
PSEN1-225ENST00000560005 PLEKHB2Q96CS7 222 aa13.65□□□□□ -0.22
PSEN1-225ENST00000560005 LINC00959A0A1B0GUT2 108 aa13.63□□□□□ -0.23
PSEN1-225ENST00000560005 BOD1L2Q8IYS8 172 aa13.63□□□□□ -0.23
PSEN1-225ENST00000560005 FAM30AQ9NZY2 134 aa13.63□□□□□ -0.23
PSEN1-225ENST00000560005 LEPROTO15243 131 aa13.62□□□□□ -0.23
PSEN1-225ENST00000560005 WFDC10BQ8IUB3 73 aa13.62□□□□□ -0.23
PSEN1-225ENST00000560005 FAT3Q8TDW7 4589 aa13.62□□□□□ -0.23
PSEN1-225ENST00000560005 PLA2G1BP04054 148 aaKnown RBP13.61□□□□□ -0.23
PSEN1-225ENST00000560005 REG3AQ06141 175 aa13.61□□□□□ -0.23
PSEN1-225ENST00000560005 LINC00269Q8N2A0 174 aa13.61□□□□□ -0.23
PSEN1-225ENST00000560005 IGKV3OR2-268A0A0C4DH90 116 aa13.6□□□□□ -0.23
PSEN1-225ENST00000560005 HNRNPA3P51991 378 aaKnown RBP13.6□□□□□ -0.23
PSEN1-225ENST00000560005 LINC01556Q5JQF7 62 aa13.6□□□□□ -0.23
PSEN1-225ENST00000560005 NTN5Q8WTR8 489 aaPredicted RBP13.6□□□□□ -0.23
PSEN1-225ENST00000560005 IGKV2D-26A0A0A0MRZ7 120 aa13.59□□□□□ -0.23
PSEN1-225ENST00000560005 TRAV8-4A0A0B4J246 113 aa13.59□□□□□ -0.23
PSEN1-225ENST00000560005 IGHV1-58A0A0C4DH39 117 aa13.59□□□□□ -0.23
PSEN1-225ENST00000560005 K7EP13 123 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms