RNA–Protein interactions for RNA: ENST00000559933.1

SPG11-220, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 2

Gene SPG11, Length 518 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-220ENST00000559933 DNAH10OSP0CZ25 163 aa3.5□□□□□ -1.85
SPG11-220ENST00000559933 TMEM97Q5BJF2 176 aa3.5□□□□□ -1.85
SPG11-220ENST00000559933 LINC01556Q5JQF7 62 aa3.5□□□□□ -1.85
SPG11-220ENST00000559933 ENHOQ6UWT2 76 aa3.5□□□□□ -1.85
SPG11-220ENST00000559933 MRPL52Q86TS9 123 aaKnown RBP3.5□□□□□ -1.85
SPG11-220ENST00000559933 OR10D4PQ8NGN7 298 aa3.5□□□□□ -1.85
SPG11-220ENST00000559933 UBE2WQ96B02 151 aa3.5□□□□□ -1.85
SPG11-220ENST00000559933 IFI27L1Q96BM0 104 aa3.5□□□□□ -1.85
SPG11-220ENST00000559933 TMEM101Q96IK0 257 aa3.5□□□□□ -1.85
SPG11-220ENST00000559933 PACRGQ96M98 296 aaPredicted RBP3.5□□□□□ -1.85
SPG11-220ENST00000559933 TIMM17AQ99595 171 aa3.5□□□□□ -1.85
SPG11-220ENST00000559933 UPK3BQ9BT76 320 aa3.5□□□□□ -1.85
SPG11-220ENST00000559933 Q9H8V8 135 aa3.5□□□□□ -1.85
SPG11-220ENST00000559933 CDC42SE2Q9NRR3 84 aa3.5□□□□□ -1.85
SPG11-220ENST00000559933 SPANXA1Q9NS26 97 aa3.5□□□□□ -1.85
SPG11-220ENST00000559933 IGLV4-69A0A075B6H9 119 aa3.49□□□□□ -1.85
SPG11-220ENST00000559933 A0A0J9YXV3 536 aa3.49□□□□□ -1.85
SPG11-220ENST00000559933 LOC105371267A0A1B0GV96 52 aa3.49□□□□□ -1.85
SPG11-220ENST00000559933 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.49□□□□□ -1.85
SPG11-220ENST00000559933 K7EMI3 77 aa3.49□□□□□ -1.85
SPG11-220ENST00000559933 COX6A2Q02221 97 aa3.49□□□□□ -1.85
SPG11-220ENST00000559933 REG3AQ06141 175 aa3.49□□□□□ -1.85
SPG11-220ENST00000559933 DGAT2L7PQ6IED9 249 aa3.49□□□□□ -1.85
SPG11-220ENST00000559933 Q6ZN92 141 aa3.49□□□□□ -1.85
SPG11-220ENST00000559933 ERASQ7Z444 233 aa3.49□□□□□ -1.85
SPG11-220ENST00000559933 ATOH7Q8N100 152 aa3.49□□□□□ -1.85
SPG11-220ENST00000559933 ZNF664Q8N3J9 261 aa3.49□□□□□ -1.85
SPG11-220ENST00000559933 TMEM18Q96B42 140 aa3.49□□□□□ -1.85
SPG11-220ENST00000559933 TMEM141Q96I45 108 aa3.49□□□□□ -1.85
SPG11-220ENST00000559933 HSPB8Q9UJY1 196 aa3.49□□□□□ -1.85
SPG11-220ENST00000559933 DNAH17Q9UFH2 4485 aa3.48□□□□□ -1.85
SPG11-220ENST00000559933 NBDYA0A0U1RRE5 68 aa3.48□□□□□ -1.85
SPG11-220ENST00000559933 LINC00959A0A1B0GUT2 108 aa3.48□□□□□ -1.85
SPG11-220ENST00000559933 C11orf86A6NJI1 115 aa3.48□□□□□ -1.85
SPG11-220ENST00000559933 SYS1-DBNDD2H3BUS1 97 aa3.48□□□□□ -1.85
SPG11-220ENST00000559933 H7C423 109 aa3.48□□□□□ -1.85
SPG11-220ENST00000559933 CCL25O15444 150 aa3.48□□□□□ -1.85
SPG11-220ENST00000559933 PRSS1P07477 247 aa3.48□□□□□ -1.85
SPG11-220ENST00000559933 ZNF25P17030 456 aaPredicted RBP3.48□□□□□ -1.85
SPG11-220ENST00000559933 XCL1P47992 114 aa3.48□□□□□ -1.85
SPG11-220ENST00000559933 UBE2D1P51668 147 aa3.48□□□□□ -1.85
SPG11-220ENST00000559933 AKR1D1P51857 326 aa3.48□□□□□ -1.85
SPG11-220ENST00000559933 MRPS36P82909 103 aaKnown RBP3.48□□□□□ -1.85
SPG11-220ENST00000559933 MAJINQ3KP22 176 aa3.48□□□□□ -1.85
SPG11-220ENST00000559933 LGALS9CQ6DKI2 356 aa3.48□□□□□ -1.85
SPG11-220ENST00000559933 TEX43Q6ZNM6 134 aa3.48□□□□□ -1.85
SPG11-220ENST00000559933 AMELXQ99217 191 aa3.48□□□□□ -1.85
SPG11-220ENST00000559933 TIMM21Q9BVV7 248 aa3.48□□□□□ -1.85
SPG11-220ENST00000559933 VCX2Q9H322 139 aa3.48□□□□□ -1.85
SPG11-220ENST00000559933 CST9LQ9H4G1 147 aa3.48□□□□□ -1.85
SPG11-220ENST00000559933 MRPL35Q9NZE8 188 aaKnown RBP3.48□□□□□ -1.85
SPG11-220ENST00000559933 PYGO1Q9Y3Y4 419 aa3.48□□□□□ -1.85
SPG11-220ENST00000559933 FRAS1Q86XX4 4008 aa3.47□□□□□ -1.85
SPG11-220ENST00000559933 IGHV3-64A0A075B6Q5 118 aa3.47□□□□□ -1.85
SPG11-220ENST00000559933 IGKV2D-24A0A075B6R9 120 aa3.47□□□□□ -1.85
SPG11-220ENST00000559933 A0A1B0GUV1 79 aa3.47□□□□□ -1.85
SPG11-220ENST00000559933 LECT2O14960 151 aa3.47□□□□□ -1.85
SPG11-220ENST00000559933 ATP5LO75964 103 aa3.47□□□□□ -1.85
SPG11-220ENST00000559933 CRPP02741 224 aa3.47□□□□□ -1.85
SPG11-220ENST00000559933 IGKV2-30P06310 120 aa3.47□□□□□ -1.85
SPG11-220ENST00000559933 WFDC2Q14508 124 aa3.47□□□□□ -1.85
SPG11-220ENST00000559933 PMVKQ15126 192 aa3.47□□□□□ -1.85
SPG11-220ENST00000559933 LINC00242Q5T6M2 205 aa3.47□□□□□ -1.85
SPG11-220ENST00000559933 KRTAP26-1Q6PEX3 210 aa3.47□□□□□ -1.85
SPG11-220ENST00000559933 C5orf38Q86SI9 138 aa3.47□□□□□ -1.85
SPG11-220ENST00000559933 MAPKAPK5-AS1Q8N8E1 139 aa3.47□□□□□ -1.85
SPG11-220ENST00000559933 CHCHD10Q8WYQ3 142 aaPredicted RBP3.47□□□□□ -1.85
SPG11-220ENST00000559933 C2orf88Q9BSF0 95 aa3.47□□□□□ -1.85
SPG11-220ENST00000559933 CHAC1Q9BUX1 264 aa3.47□□□□□ -1.85
SPG11-220ENST00000559933 MAP1LC3CQ9BXW4 147 aa3.47□□□□□ -1.85
SPG11-220ENST00000559933 PRR34Q9NV39 138 aa3.47□□□□□ -1.85
SPG11-220ENST00000559933 TP73-AS1Q9UF72 201 aa3.47□□□□□ -1.85
SPG11-220ENST00000559933 CHTOPQ9Y3Y2 248 aaKnown RBP3.47□□□□□ -1.85
SPG11-220ENST00000559933 CSDC2Q9Y534 153 aaKnown RBP3.47□□□□□ -1.85
SPG11-220ENST00000559933 DNAH11Q96DT5 4516 aa3.47□□□□□ -1.85
SPG11-220ENST00000559933 FAT2Q9NYQ8 4349 aa3.46□□□□□ -1.85
SPG11-220ENST00000559933 LCE6AA0A183 80 aa3.46□□□□□ -1.86
SPG11-220ENST00000559933 hDV102S1A0JD36 115 aa3.46□□□□□ -1.86
SPG11-220ENST00000559933 IBA57-AS1B1ANH7 110 aa3.46□□□□□ -1.86
SPG11-220ENST00000559933 SPINK8P0C7L1 97 aa3.46□□□□□ -1.86
SPG11-220ENST00000559933 IGLC3P0DOY3 106 aa3.46□□□□□ -1.86
SPG11-220ENST00000559933 ZNF22P17026 224 aaPredicted RBP3.46□□□□□ -1.86
SPG11-220ENST00000559933 FUSP35637 526 aaKnown RBP eCLIP3.46□□□□□ -1.86
SPG11-220ENST00000559933 PYY3Q5JQD4 70 aa3.46□□□□□ -1.86
SPG11-220ENST00000559933 LINC01545Q5VT33 79 aa3.46□□□□□ -1.86
SPG11-220ENST00000559933 LINC00469Q8N7U9 141 aa3.46□□□□□ -1.86
SPG11-220ENST00000559933 Q8N9P0 234 aaPredicted RBP3.46□□□□□ -1.86
SPG11-220ENST00000559933 TRAV8-3A0A0A6YYJ7 113 aa3.45□□□□□ -1.86
SPG11-220ENST00000559933 TRAV12-1A0A0B4J245 112 aa3.45□□□□□ -1.86
SPG11-220ENST00000559933 KRTAP29-1A8MX34 341 aaPredicted RBP3.45□□□□□ -1.86
SPG11-220ENST00000559933 F8VRH5 84 aa3.45□□□□□ -1.86
SPG11-220ENST00000559933 SCGB1D1O95968 90 aa3.45□□□□□ -1.86
SPG11-220ENST00000559933 G0S2P27469 103 aa3.45□□□□□ -1.86
SPG11-220ENST00000559933 TSPEAR-AS2P59090 65 aa3.45□□□□□ -1.86
SPG11-220ENST00000559933 PKIAP61925 76 aa3.45□□□□□ -1.86
SPG11-220ENST00000559933 HIGD2BQ4VC39 106 aa3.45□□□□□ -1.86
SPG11-220ENST00000559933 PET117Q6UWS5 81 aa3.45□□□□□ -1.86
SPG11-220ENST00000559933 Q6ZR54 194 aa3.45□□□□□ -1.86
SPG11-220ENST00000559933 STPG4Q8N801 248 aa3.45□□□□□ -1.86
SPG11-220ENST00000559933 LINC00526Q96FQ7 95 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms