RNA–Protein interactions for RNA: ENST00000559931.5

SMAD6-204, Transcript of SMAD family member 6, humanhuman

TSL 3

Gene SMAD6, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-204ENST00000559931 Q6ZRN7 208 aaPredicted RBP9.55□□□□□ -0.88
SMAD6-204ENST00000559931 LINC00173Q6ZV60 143 aa9.55□□□□□ -0.88
SMAD6-204ENST00000559931 DNAH17Q9UFH2 4485 aa9.54□□□□□ -0.88
SMAD6-204ENST00000559931 H0Y8G0 127 aa9.54□□□□□ -0.88
SMAD6-204ENST00000559931 UBE2D1P51668 147 aa9.54□□□□□ -0.88
SMAD6-204ENST00000559931 CD164L2Q6UWJ8 174 aa9.54□□□□□ -0.88
SMAD6-204ENST00000559931 SCGB1D1O95968 90 aa9.53□□□□□ -0.88
SMAD6-204ENST00000559931 MAPKAPK5-AS1Q8N8E1 139 aa9.53□□□□□ -0.88
SMAD6-204ENST00000559931 GEMIN7Q9H840 131 aaKnown RBP9.53□□□□□ -0.88
SMAD6-204ENST00000559931 A0A0J9YXV3 536 aa9.52□□□□□ -0.89
SMAD6-204ENST00000559931 EREGO14944 169 aa9.52□□□□□ -0.89
SMAD6-204ENST00000559931 LECT2O14960 151 aa9.52□□□□□ -0.89
SMAD6-204ENST00000559931 MALP21145 153 aa9.52□□□□□ -0.89
SMAD6-204ENST00000559931 SEC11AP67812 179 aa9.52□□□□□ -0.89
SMAD6-204ENST00000559931 TNP2Q05952 138 aa9.52□□□□□ -0.89
SMAD6-204ENST00000559931 LINC00242Q5T6M2 205 aa9.52□□□□□ -0.89
SMAD6-204ENST00000559931 KRTAP26-1Q6PEX3 210 aa9.52□□□□□ -0.89
SMAD6-204ENST00000559931 LINC00336Q6ZUF6 198 aa9.52□□□□□ -0.89
SMAD6-204ENST00000559931 C5orf38Q86SI9 138 aa9.52□□□□□ -0.89
SMAD6-204ENST00000559931 MAP1LC3CQ9BXW4 147 aa9.52□□□□□ -0.89
SMAD6-204ENST00000559931 COX7A2LO14548 114 aa9.51□□□□□ -0.89
SMAD6-204ENST00000559931 FOXI1Q12951 378 aa9.51□□□□□ -0.89
SMAD6-204ENST00000559931 CHTOPQ9Y3Y2 248 aaKnown RBP9.51□□□□□ -0.89
SMAD6-204ENST00000559931 HERVK_113P63121 156 aa9.5□□□□□ -0.89
SMAD6-204ENST00000559931 COX6A2Q02221 97 aa9.5□□□□□ -0.89
SMAD6-204ENST00000559931 CFAP161Q6P656 301 aa9.5□□□□□ -0.89
SMAD6-204ENST00000559931 LINC00587B1AMM8 73 aa9.49□□□□□ -0.89
SMAD6-204ENST00000559931 USP17L23D6RBM5 183 aa9.49□□□□□ -0.89
SMAD6-204ENST00000559931 FAT2Q9NYQ8 4349 aa9.48□□□□□ -0.89
SMAD6-204ENST00000559931 A0A087WTM6 91 aa9.48□□□□□ -0.89
SMAD6-204ENST00000559931 TRAV12-1A0A0B4J245 112 aa9.48□□□□□ -0.89
SMAD6-204ENST00000559931 IGHV3OR16-9A0A0B4J2B5 98 aa9.48□□□□□ -0.89
SMAD6-204ENST00000559931 TINCRA0A1B0GVN0 87 aa9.48□□□□□ -0.89
SMAD6-204ENST00000559931 CDPF1Q6NVV7 123 aa9.48□□□□□ -0.89
SMAD6-204ENST00000559931 LINC00469Q8N7U9 141 aa9.48□□□□□ -0.89
SMAD6-204ENST00000559931 LRCOL1A6NCL2 159 aa9.47□□□□□ -0.89
SMAD6-204ENST00000559931 APOMO95445 188 aa9.47□□□□□ -0.89
SMAD6-204ENST00000559931 KRTDAPP60985 99 aa9.47□□□□□ -0.89
SMAD6-204ENST00000559931 C14orf177Q52M58 125 aa9.47□□□□□ -0.89
SMAD6-204ENST00000559931 FAM19A3Q7Z5A8 133 aa9.47□□□□□ -0.89
SMAD6-204ENST00000559931 CHAC1Q9BUX1 264 aa9.47□□□□□ -0.89
SMAD6-204ENST00000559931 EPPK1P58107 5090 aaKnown RBP9.46□□□□□ -0.89
SMAD6-204ENST00000559931 IGHV1-58A0A0C4DH39 117 aa9.46□□□□□ -0.9
SMAD6-204ENST00000559931 SYS1-DBNDD2H3BUS1 97 aa9.46□□□□□ -0.9
SMAD6-204ENST00000559931 DDTP30046 118 aa9.46□□□□□ -0.9
SMAD6-204ENST00000559931 WFDC2Q14508 124 aa9.46□□□□□ -0.9
SMAD6-204ENST00000559931 MRPL35Q9NZE8 188 aaKnown RBP9.46□□□□□ -0.9
SMAD6-204ENST00000559931 CDKN2A-AS1Q9UH64 79 aa9.46□□□□□ -0.9
SMAD6-204ENST00000559931 A0A087WZ39 114 aa9.45□□□□□ -0.9
SMAD6-204ENST00000559931 hDV102S1A0JD36 115 aa9.45□□□□□ -0.9
SMAD6-204ENST00000559931 F8VRH5 84 aa9.45□□□□□ -0.9
SMAD6-204ENST00000559931 H3BRM9 83 aa9.45□□□□□ -0.9
SMAD6-204ENST00000559931 IGLC3P0DOY3 106 aa9.45□□□□□ -0.9
SMAD6-204ENST00000559931 ODF1Q14990 250 aa9.45□□□□□ -0.9
SMAD6-204ENST00000559931 IGLV4-69A0A075B6H9 119 aa9.44□□□□□ -0.9
SMAD6-204ENST00000559931 C3orf79P0CE67 100 aa9.44□□□□□ -0.9
SMAD6-204ENST00000559931 CTAG1AP78358 180 aa9.44□□□□□ -0.9
SMAD6-204ENST00000559931 HIGD2BQ4VC39 106 aa9.44□□□□□ -0.9
SMAD6-204ENST00000559931 TMEM170BQ5T4T1 132 aa9.44□□□□□ -0.9
SMAD6-204ENST00000559931 Q8N814 137 aa9.44□□□□□ -0.9
SMAD6-204ENST00000559931 PMCHL2Q9BQD1 86 aa9.44□□□□□ -0.9
SMAD6-204ENST00000559931 PRO1933Q9H354 126 aa9.44□□□□□ -0.9
SMAD6-204ENST00000559931 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.43□□□□□ -0.9
SMAD6-204ENST00000559931 C11orf86A6NJI1 115 aa9.43□□□□□ -0.9
SMAD6-204ENST00000559931 ZNF561-AS1K7EIQ3 104 aa9.43□□□□□ -0.9
SMAD6-204ENST00000559931 PET117Q6UWS5 81 aa9.43□□□□□ -0.9
SMAD6-204ENST00000559931 C15orf56Q8N910 161 aa9.43□□□□□ -0.9
SMAD6-204ENST00000559931 ORAOV1Q8WV07 137 aa9.43□□□□□ -0.9
SMAD6-204ENST00000559931 VAMP8Q9BV40 100 aa9.43□□□□□ -0.9
SMAD6-204ENST00000559931 IGHV3-64A0A075B6Q5 118 aa9.42□□□□□ -0.9
SMAD6-204ENST00000559931 DPM2O94777 84 aa9.42□□□□□ -0.9
SMAD6-204ENST00000559931 SPINK8P0C7L1 97 aa9.42□□□□□ -0.9
SMAD6-204ENST00000559931 LINC01561Q8N1V8 128 aa9.42□□□□□ -0.9
SMAD6-204ENST00000559931 IGLV5-45A0A087WSX0 123 aa9.41□□□□□ -0.9
SMAD6-204ENST00000559931 C20orf202A1L168 122 aa9.41□□□□□ -0.9
SMAD6-204ENST00000559931 PRSS2P07478 247 aa9.41□□□□□ -0.9
SMAD6-204ENST00000559931 ZNF22P17026 224 aaPredicted RBP9.41□□□□□ -0.9
SMAD6-204ENST00000559931 PLNP26678 52 aa9.41□□□□□ -0.9
SMAD6-204ENST00000559931 SPATA12Q7Z6I5 190 aa9.41□□□□□ -0.9
SMAD6-204ENST00000559931 LINC00526Q96FQ7 95 aa9.41□□□□□ -0.9
SMAD6-204ENST00000559931 TOMM7Q9P0U1 55 aa9.41□□□□□ -0.9
SMAD6-204ENST00000559931 GVQW2A0A096LPI5 108 aaPredicted RBP9.4□□□□□ -0.9
SMAD6-204ENST00000559931 IGKCP01834 107 aa9.4□□□□□ -0.9
SMAD6-204ENST00000559931 SPAG11BQ08648 103 aa9.4□□□□□ -0.9
SMAD6-204ENST00000559931 PKD1P98161 4303 aa9.4□□□□□ -0.9
SMAD6-204ENST00000559931 HECTD4Q9Y4D8 3996 aa9.39□□□□□ -0.91
SMAD6-204ENST00000559931 DNAH11Q96DT5 4516 aa9.39□□□□□ -0.91
SMAD6-204ENST00000559931 FUSP35637 526 aaKnown RBP eCLIP9.39□□□□□ -0.91
SMAD6-204ENST00000559931 C6orf226Q5I0X4 101 aa9.39□□□□□ -0.91
SMAD6-204ENST00000559931 LINC01545Q5VT33 79 aa9.39□□□□□ -0.91
SMAD6-204ENST00000559931 PGPEP1Q9NXJ5 209 aa9.39□□□□□ -0.91
SMAD6-204ENST00000559931 IGLV5-52A0A0A0MRZ9 124 aa9.38□□□□□ -0.91
SMAD6-204ENST00000559931 LBHQ53QV2 105 aaPredicted RBP9.38□□□□□ -0.91
SMAD6-204ENST00000559931 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.37□□□□□ -0.91
SMAD6-204ENST00000559931 SMIM1B2RUZ4 78 aa9.37□□□□□ -0.91
SMAD6-204ENST00000559931 KRTAP10-2P60368 255 aa9.37□□□□□ -0.91
SMAD6-204ENST00000559931 CKS1BP61024 79 aa9.37□□□□□ -0.91
SMAD6-204ENST00000559931 NTN5Q8WTR8 489 aaPredicted RBP9.37□□□□□ -0.91
SMAD6-204ENST00000559931 CAMK2N2Q96S95 79 aa9.37□□□□□ -0.91
SMAD6-204ENST00000559931 PKHD1P08F94 4074 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 107.8 ms