RNA–Protein interactions for RNA: ENST00000559401.1

SNX1-207, Transcript of sorting nexin 1, humanhuman

TSL 2

Gene SNX1, Length 408 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-207ENST00000559401 TRAV9-1A0A075B6T8 112 aa5.21□□□□□ -1.58
SNX1-207ENST00000559401 A0A096LNI7 61 aa5.21□□□□□ -1.58
SNX1-207ENST00000559401 TGIF2-C20orf24A0A0A6YYL0 155 aa5.21□□□□□ -1.58
SNX1-207ENST00000559401 MRPS36P82909 103 aaKnown RBP5.21□□□□□ -1.58
SNX1-207ENST00000559401 ORMDL2Q53FV1 153 aa5.21□□□□□ -1.58
SNX1-207ENST00000559401 C2orf66Q6UXQ4 117 aa5.21□□□□□ -1.58
SNX1-207ENST00000559401 Q6ZN92 141 aa5.21□□□□□ -1.58
SNX1-207ENST00000559401 TEX43Q6ZNM6 134 aa5.21□□□□□ -1.58
SNX1-207ENST00000559401 STPG4Q8N801 248 aa5.21□□□□□ -1.58
SNX1-207ENST00000559401 C7orf33Q8WU49 177 aa5.21□□□□□ -1.58
SNX1-207ENST00000559401 ORAOV1Q8WV07 137 aa5.21□□□□□ -1.58
SNX1-207ENST00000559401 TMEM141Q96I45 108 aa5.21□□□□□ -1.58
SNX1-207ENST00000559401 DMBT1Q9UGM3 2413 aaPredicted RBP5.21□□□□□ -1.58
SNX1-207ENST00000559401 IGLV4-3A0A075B6K6 122 aa5.2□□□□□ -1.58
SNX1-207ENST00000559401 PRSS47A8MTI9 375 aa5.2□□□□□ -1.58
SNX1-207ENST00000559401 GAGE2BQ13066 116 aa5.2□□□□□ -1.58
SNX1-207ENST00000559401 Q6ZRU5 148 aa5.2□□□□□ -1.58
SNX1-207ENST00000559401 C2orf88Q9BSF0 95 aa5.2□□□□□ -1.58
SNX1-207ENST00000559401 NXT2Q9NPJ8 142 aaKnown RBP5.2□□□□□ -1.58
SNX1-207ENST00000559401 RPS10P5Q9NQ39 176 aa5.2□□□□□ -1.58
SNX1-207ENST00000559401 LINC00474Q9P2X8 69 aa5.2□□□□□ -1.58
SNX1-207ENST00000559401 PYGO1Q9Y3Y4 419 aa5.2□□□□□ -1.58
SNX1-207ENST00000559401 LOC107984640A0A0U1RRK4 108 aa5.19□□□□□ -1.58
SNX1-207ENST00000559401 KRTAP10-4P60372 401 aaPredicted RBP5.19□□□□□ -1.58
SNX1-207ENST00000559401 RPL18AQ02543 176 aaKnown RBP5.19□□□□□ -1.58
SNX1-207ENST00000559401 RHEBQ15382 184 aa5.19□□□□□ -1.58
SNX1-207ENST00000559401 OR10D4PQ8NGN7 298 aa5.19□□□□□ -1.58
SNX1-207ENST00000559401 FAM104AQ969W3 186 aa5.19□□□□□ -1.58
SNX1-207ENST00000559401 VCX2Q9H322 139 aa5.19□□□□□ -1.58
SNX1-207ENST00000559401 PLAC8Q9NZF1 115 aa5.19□□□□□ -1.58
SNX1-207ENST00000559401 VPS13BQ7Z7G8 4022 aa5.19□□□□□ -1.58
SNX1-207ENST00000559401 IGHV3OR16-9A0A0B4J2B5 98 aa5.18□□□□□ -1.58
SNX1-207ENST00000559401 A0A0J9YXV3 536 aa5.18□□□□□ -1.58
SNX1-207ENST00000559401 K7EMI3 77 aa5.18□□□□□ -1.58
SNX1-207ENST00000559401 COX19Q49B96 90 aa5.18□□□□□ -1.58
SNX1-207ENST00000559401 ZC2HC1BQ5TFG8 222 aa5.18□□□□□ -1.58
SNX1-207ENST00000559401 C2orf48Q96LS8 159 aa5.18□□□□□ -1.58
SNX1-207ENST00000559401 NDUFA1O15239 70 aa5.17□□□□□ -1.58
SNX1-207ENST00000559401 APOC3P02656 99 aa5.17□□□□□ -1.58
SNX1-207ENST00000559401 MT-ND6P03923 174 aa5.17□□□□□ -1.58
SNX1-207ENST00000559401 G0S2P27469 103 aa5.17□□□□□ -1.58
SNX1-207ENST00000559401 HNRNPA3P51991 378 aaKnown RBP5.17□□□□□ -1.58
SNX1-207ENST00000559401 PTTG1IPP53801 180 aa5.17□□□□□ -1.58
SNX1-207ENST00000559401 FABP9Q0Z7S8 132 aa5.17□□□□□ -1.58
SNX1-207ENST00000559401 PAPPA-AS1Q5QFB9 102 aa5.17□□□□□ -1.58
SNX1-207ENST00000559401 LINC00242Q5T6M2 205 aa5.17□□□□□ -1.58
SNX1-207ENST00000559401 GNB1LQ9BYB4 327 aa5.17□□□□□ -1.58
SNX1-207ENST00000559401 MRPL18Q9H0U6 180 aaKnown RBP5.17□□□□□ -1.58
SNX1-207ENST00000559401 CARHSP1Q9Y2V2 147 aaKnown RBP5.17□□□□□ -1.58
SNX1-207ENST00000559401 KRTAP29-1A8MX34 341 aaPredicted RBP5.16□□□□□ -1.58
SNX1-207ENST00000559401 UBE2D1P51668 147 aa5.16□□□□□ -1.58
SNX1-207ENST00000559401 C10orf91Q5T1B1 145 aa5.16□□□□□ -1.58
SNX1-207ENST00000559401 FA2HQ7L5A8 372 aa5.16□□□□□ -1.58
SNX1-207ENST00000559401 ALKBH7Q9BT30 221 aaPredicted RBP5.16□□□□□ -1.58
SNX1-207ENST00000559401 SMCO4Q9NRQ5 59 aa5.16□□□□□ -1.58
SNX1-207ENST00000559401 TOMM7Q9P0U1 55 aa5.16□□□□□ -1.58
SNX1-207ENST00000559401 A0A087WZ39 114 aa5.15□□□□□ -1.59
SNX1-207ENST00000559401 IGIPA6NJ69 53 aa5.15□□□□□ -1.59
SNX1-207ENST00000559401 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.15□□□□□ -1.59
SNX1-207ENST00000559401 PRSS2P07478 247 aa5.15□□□□□ -1.59
SNX1-207ENST00000559401 NPSP0C0P6 89 aa5.15□□□□□ -1.59
SNX1-207ENST00000559401 UNQ6190/PRO20217Q6UXQ8 127 aa5.15□□□□□ -1.59
SNX1-207ENST00000559401 LINC00173Q6ZV60 143 aa5.15□□□□□ -1.59
SNX1-207ENST00000559401 TOMM6Q96B49 74 aa5.15□□□□□ -1.59
SNX1-207ENST00000559401 PACRGQ96M98 296 aaPredicted RBP5.15□□□□□ -1.59
SNX1-207ENST00000559401 SCGB3A1Q96QR1 104 aa5.15□□□□□ -1.59
SNX1-207ENST00000559401 AMELXQ99217 191 aa5.15□□□□□ -1.59
SNX1-207ENST00000559401 TIMM17AQ99595 171 aa5.15□□□□□ -1.59
SNX1-207ENST00000559401 GEMIN7Q9H840 131 aaKnown RBP5.15□□□□□ -1.59
SNX1-207ENST00000559401 MRPL35Q9NZE8 188 aaKnown RBP5.15□□□□□ -1.59
SNX1-207ENST00000559401 F8WDY8 70 aa5.14□□□□□ -1.59
SNX1-207ENST00000559401 SNAPINO95295 136 aa5.14□□□□□ -1.59
SNX1-207ENST00000559401 OXTP01178 125 aa5.14□□□□□ -1.59
SNX1-207ENST00000559401 HERVK_113P63121 156 aa5.14□□□□□ -1.59
SNX1-207ENST00000559401 SEC11AP67812 179 aa5.14□□□□□ -1.59
SNX1-207ENST00000559401 PRR3P79522 188 aaKnown RBP5.14□□□□□ -1.59
SNX1-207ENST00000559401 RNF151Q2KHN1 245 aa5.14□□□□□ -1.59
SNX1-207ENST00000559401 C9orf116Q5BN46 136 aaPredicted RBP5.14□□□□□ -1.59
SNX1-207ENST00000559401 C10orf25Q5T742 122 aa5.14□□□□□ -1.59
SNX1-207ENST00000559401 SVBPQ8N300 66 aa5.14□□□□□ -1.59
SNX1-207ENST00000559401 TRAPPC1Q9Y5R8 145 aa5.14□□□□□ -1.59
SNX1-207ENST00000559401 MYCBP2O75592 4640 aa5.14□□□□□ -1.59
SNX1-207ENST00000559401 CKS1BP61024 79 aa5.13□□□□□ -1.59
SNX1-207ENST00000559401 GAGE2EQ4V326 116 aa5.13□□□□□ -1.59
SNX1-207ENST00000559401 C2orf82Q6UX34 121 aa5.13□□□□□ -1.59
SNX1-207ENST00000559401 ERASQ7Z444 233 aa5.13□□□□□ -1.59
SNX1-207ENST00000559401 C6orf48Q9UBA6 75 aa5.13□□□□□ -1.59
SNX1-207ENST00000559401 GAGE2DQ9UEU5 116 aa5.13□□□□□ -1.59
SNX1-207ENST00000559401 A0A1W2PNN7 141 aa5.12□□□□□ -1.59
SNX1-207ENST00000559401 LINC01549A6NIU2 74 aa5.12□□□□□ -1.59
SNX1-207ENST00000559401 C6orf226Q5I0X4 101 aa5.12□□□□□ -1.59
SNX1-207ENST00000559401 FAM19A5Q7Z5A7 132 aaPredicted RBP5.12□□□□□ -1.59
SNX1-207ENST00000559401 LINC01561Q8N1V8 128 aa5.12□□□□□ -1.59
SNX1-207ENST00000559401 LINC00469Q8N7U9 141 aa5.12□□□□□ -1.59
SNX1-207ENST00000559401 CDKN2A-AS1Q9UH64 79 aa5.12□□□□□ -1.59
SNX1-207ENST00000559401 TRBV30A0A0K0K1B3 111 aa5.11□□□□□ -1.59
SNX1-207ENST00000559401 NDUFA6P56556 154 aa5.11□□□□□ -1.59
SNX1-207ENST00000559401 KIAA0087Q14695 138 aa5.11□□□□□ -1.59
SNX1-207ENST00000559401 Q6ZRP5 223 aa5.11□□□□□ -1.59
SNX1-207ENST00000559401 FAM168BA1KXE4 195 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms