RNA–Protein interactions for RNA: ENST00000559373.1

TSPAN3-206, Transcript of tetraspanin 3, humanhuman

TSL 3

Gene TSPAN3, Length 393 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-206ENST00000559373 SMIM2Q9BVW6 85 aa12.63□□□□□ -0.39
TSPAN3-206ENST00000559373 PEA15Q15121 130 aa12.62□□□□□ -0.39
TSPAN3-206ENST00000559373 C2orf48Q96LS8 159 aa12.62□□□□□ -0.39
TSPAN3-206ENST00000559373 PSORS1C2Q9UIG4 136 aa12.62□□□□□ -0.39
TSPAN3-206ENST00000559373 C10orf25Q5T742 122 aa12.61□□□□□ -0.39
TSPAN3-206ENST00000559373 LRP2P98164 4655 aa12.61□□□□□ -0.39
TSPAN3-206ENST00000559373 HBBP68871 147 aa12.6□□□□□ -0.39
TSPAN3-206ENST00000559373 A0A1B0GXF2 115 aa12.59□□□□□ -0.39
TSPAN3-206ENST00000559373 FAM168BA1KXE4 195 aa12.59□□□□□ -0.39
TSPAN3-206ENST00000559373 IFITM10A6NMD0 228 aa12.59□□□□□ -0.39
TSPAN3-206ENST00000559373 MT-ND6P03923 174 aa12.59□□□□□ -0.39
TSPAN3-206ENST00000559373 RPL32P62910 135 aaKnown RBP12.59□□□□□ -0.39
TSPAN3-206ENST00000559373 IGHV3OR16-9A0A0B4J2B5 98 aa12.58□□□□□ -0.4
TSPAN3-206ENST00000559373 A0A1B0GW15 77 aa12.58□□□□□ -0.4
TSPAN3-206ENST00000559373 C1orf137Q5JT78 98 aa12.58□□□□□ -0.4
TSPAN3-206ENST00000559373 UNQ6190/PRO20217Q6UXQ8 127 aa12.58□□□□□ -0.4
TSPAN3-206ENST00000559373 F8W036 122 aa12.57□□□□□ -0.4
TSPAN3-206ENST00000559373 OR10D4PQ8NGN7 298 aa12.57□□□□□ -0.4
TSPAN3-206ENST00000559373 SPANXA1Q9NS26 97 aa12.57□□□□□ -0.4
TSPAN3-206ENST00000559373 LOC389332A0A1B0GUA5 103 aa12.55□□□□□ -0.4
TSPAN3-206ENST00000559373 KRTAP11-1Q8IUC1 163 aa12.55□□□□□ -0.4
TSPAN3-206ENST00000559373 NDUFA1O15239 70 aa12.54□□□□□ -0.4
TSPAN3-206ENST00000559373 S100A8P05109 93 aa12.54□□□□□ -0.4
TSPAN3-206ENST00000559373 MRPS36P82909 103 aaKnown RBP12.54□□□□□ -0.4
TSPAN3-206ENST00000559373 RNF151Q2KHN1 245 aa12.54□□□□□ -0.4
TSPAN3-206ENST00000559373 GAGE2EQ4V326 116 aa12.54□□□□□ -0.4
TSPAN3-206ENST00000559373 ZC2HC1BQ5TFG8 222 aa12.54□□□□□ -0.4
TSPAN3-206ENST00000559373 PRELID3AQ96N28 172 aa12.54□□□□□ -0.4
TSPAN3-206ENST00000559373 MRPL35Q9NZE8 188 aaKnown RBP12.54□□□□□ -0.4
TSPAN3-206ENST00000559373 C6orf48Q9UBA6 75 aa12.54□□□□□ -0.4
TSPAN3-206ENST00000559373 GAGE2DQ9UEU5 116 aa12.54□□□□□ -0.4
TSPAN3-206ENST00000559373 TMEM136Q6ZRR5 245 aa12.53□□□□□ -0.4
TSPAN3-206ENST00000559373 FAM19A5Q7Z5A7 132 aaPredicted RBP12.53□□□□□ -0.4
TSPAN3-206ENST00000559373 ORMDL3Q8N138 153 aa12.53□□□□□ -0.4
TSPAN3-206ENST00000559373 RAB5AP20339 215 aa12.52□□□□□ -0.41
TSPAN3-206ENST00000559373 IGLV4-3A0A075B6K6 122 aa12.51□□□□□ -0.41
TSPAN3-206ENST00000559373 PPBPP02775 128 aa12.51□□□□□ -0.41
TSPAN3-206ENST00000559373 IMMP2LQ96T52 175 aa12.51□□□□□ -0.41
TSPAN3-206ENST00000559373 SMDT1Q9H4I9 107 aa12.51□□□□□ -0.41
TSPAN3-206ENST00000559373 A0A087WZ39 114 aa12.5□□□□□ -0.41
TSPAN3-206ENST00000559373 TGIF2-C20orf24A0A0A6YYL0 155 aa12.5□□□□□ -0.41
TSPAN3-206ENST00000559373 IFI27P40305 119 aaPredicted RBP12.5□□□□□ -0.41
TSPAN3-206ENST00000559373 LINC00242Q5T6M2 205 aa12.5□□□□□ -0.41
TSPAN3-206ENST00000559373 C2orf82Q6UX34 121 aa12.5□□□□□ -0.41
TSPAN3-206ENST00000559373 KIAA0087Q14695 138 aa12.49□□□□□ -0.41
TSPAN3-206ENST00000559373 RNF213Q63HN8 5207 aa12.49□□□□□ -0.41
TSPAN3-206ENST00000559373 KRTAP7-1Q8IUC3 87 aa12.48□□□□□ -0.41
TSPAN3-206ENST00000559373 IGLV7-43P04211 117 aa12.47□□□□□ -0.41
TSPAN3-206ENST00000559373 PRR26Q8N8Z3 221 aa12.47□□□□□ -0.41
TSPAN3-206ENST00000559373 TLX1NBP0CAT3 122 aa12.46□□□□□ -0.41
TSPAN3-206ENST00000559373 ATP5L2Q7Z4Y8 100 aa12.46□□□□□ -0.41
TSPAN3-206ENST00000559373 TMEM141Q96I45 108 aa12.46□□□□□ -0.41
TSPAN3-206ENST00000559373 PYGO1Q9Y3Y4 419 aa12.46□□□□□ -0.41
TSPAN3-206ENST00000559373 F8WDY8 70 aa12.45□□□□□ -0.42
TSPAN3-206ENST00000559373 MAP1LC3AQ9H492 121 aa12.45□□□□□ -0.42
TSPAN3-206ENST00000559373 UBE2D1P51668 147 aa12.44□□□□□ -0.42
TSPAN3-206ENST00000559373 TEX43Q6ZNM6 134 aa12.44□□□□□ -0.42
TSPAN3-206ENST00000559373 LINC00173Q6ZV60 143 aa12.44□□□□□ -0.42
TSPAN3-206ENST00000559373 M0QXV9 152 aa12.42□□□□□ -0.42
TSPAN3-206ENST00000559373 C9orf129Q5T035 196 aaKnown RBP12.42□□□□□ -0.42
TSPAN3-206ENST00000559373 C2orf66Q6UXQ4 117 aa12.42□□□□□ -0.42
TSPAN3-206ENST00000559373 DIRC1Q969H9 104 aa12.42□□□□□ -0.42
TSPAN3-206ENST00000559373 TOMM7Q9P0U1 55 aa12.42□□□□□ -0.42
TSPAN3-206ENST00000559373 LPAP08519 4548 aa12.41□□□□□ -0.42
TSPAN3-206ENST00000559373 PRSS47A8MTI9 375 aa12.41□□□□□ -0.42
TSPAN3-206ENST00000559373 UBE2BP63146 152 aa12.41□□□□□ -0.42
TSPAN3-206ENST00000559373 LINC00469Q8N7U9 141 aa12.41□□□□□ -0.42
TSPAN3-206ENST00000559373 Q8N8P6 123 aa12.41□□□□□ -0.42
TSPAN3-206ENST00000559373 PACRGQ96M98 296 aaPredicted RBP12.4□□□□□ -0.42
TSPAN3-206ENST00000559373 C2orf88Q9BSF0 95 aa12.4□□□□□ -0.42
TSPAN3-206ENST00000559373 CYSLTR1Q9Y271 337 aa12.4□□□□□ -0.42
TSPAN3-206ENST00000559373 H0Y9J4 135 aa12.39□□□□□ -0.43
TSPAN3-206ENST00000559373 VCX2Q9H322 139 aa12.39□□□□□ -0.43
TSPAN3-206ENST00000559373 TRBV30A0A0K0K1B3 111 aa12.38□□□□□ -0.43
TSPAN3-206ENST00000559373 AMELXQ99217 191 aa12.38□□□□□ -0.43
TSPAN3-206ENST00000559373 NDUFC2-KCTD14E9PQ53 114 aa12.37□□□□□ -0.43
TSPAN3-206ENST00000559373 MT-ND4LP03901 98 aa12.37□□□□□ -0.43
TSPAN3-206ENST00000559373 Q6ZN92 141 aa12.37□□□□□ -0.43
TSPAN3-206ENST00000559373 ANAPC16Q96DE5 110 aa12.37□□□□□ -0.43
TSPAN3-206ENST00000559373 LAMTOR2Q9Y2Q5 125 aa12.37□□□□□ -0.43
TSPAN3-206ENST00000559373 PRSS2P07478 247 aa12.36□□□□□ -0.43
TSPAN3-206ENST00000559373 IGIPA6NJ69 53 aa12.35□□□□□ -0.43
TSPAN3-206ENST00000559373 PNRC1Q12796 327 aaPredicted RBP12.35□□□□□ -0.43
TSPAN3-206ENST00000559373 KIAA1644Q3SXP7 199 aa12.35□□□□□ -0.43
TSPAN3-206ENST00000559373 CKS1BP61024 79 aa12.34□□□□□ -0.43
TSPAN3-206ENST00000559373 ORMDL2Q53FV1 153 aa12.34□□□□□ -0.43
TSPAN3-206ENST00000559373 C6orf226Q5I0X4 101 aa12.34□□□□□ -0.43
TSPAN3-206ENST00000559373 CTDSP1Q9GZU7 261 aa12.34□□□□□ -0.43
TSPAN3-206ENST00000559373 XAGE1AQ9HD64 81 aa12.34□□□□□ -0.43
TSPAN3-206ENST00000559373 KRTAP1-4P0C5Y4 121 aa12.33□□□□□ -0.44
TSPAN3-206ENST00000559373 ALKBH7Q9BT30 221 aaPredicted RBP12.33□□□□□ -0.44
TSPAN3-206ENST00000559373 CDKN2A-AS1Q9UH64 79 aa12.33□□□□□ -0.44
TSPAN3-206ENST00000559373 LINC01561Q8N1V8 128 aa12.32□□□□□ -0.44
TSPAN3-206ENST00000559373 RAB14P61106 215 aa12.3□□□□□ -0.44
TSPAN3-206ENST00000559373 C22orf24Q9Y442 160 aa12.3□□□□□ -0.44
TSPAN3-206ENST00000559373 Q8IZM0 81 aa12.29□□□□□ -0.44
TSPAN3-206ENST00000559373 NXT2Q9NPJ8 142 aaKnown RBP12.29□□□□□ -0.44
TSPAN3-206ENST00000559373 GEMIN7Q9H840 131 aaKnown RBP12.28□□□□□ -0.44
TSPAN3-206ENST00000559373 ADCYAP1P18509 176 aa12.27□□□□□ -0.45
TSPAN3-206ENST00000559373 HERVK_113P63121 156 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms