RNA–Protein interactions for RNA: ENST00000559037.1

CASC4-207, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 680 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-207ENST00000559037 KRTAP5-1Q6L8H4 278 aa3.47□□□□□ -1.85
CASC4-207ENST00000559037 C2orf66Q6UXQ4 117 aa3.47□□□□□ -1.85
CASC4-207ENST00000559037 RASL10AQ92737 203 aa3.47□□□□□ -1.85
CASC4-207ENST00000559037 DNAJC30Q96LL9 226 aa3.47□□□□□ -1.85
CASC4-207ENST00000559037 C18orf15Q96N68 181 aa3.47□□□□□ -1.85
CASC4-207ENST00000559037 TIMM17AQ99595 171 aa3.47□□□□□ -1.85
CASC4-207ENST00000559037 TRAV12-2A0A075B6T6 113 aa3.46□□□□□ -1.86
CASC4-207ENST00000559037 DEFB131BA0A096LNP1 70 aa3.46□□□□□ -1.86
CASC4-207ENST00000559037 TRBV27A0A0K0K1C4 114 aa3.46□□□□□ -1.86
CASC4-207ENST00000559037 SDHAF1A6NFY7 115 aa3.46□□□□□ -1.86
CASC4-207ENST00000559037 I3L3M4 83 aa3.46□□□□□ -1.86
CASC4-207ENST00000559037 SPART-AS1P0CW21 52 aa3.46□□□□□ -1.86
CASC4-207ENST00000559037 NMUP48645 174 aa3.46□□□□□ -1.86
CASC4-207ENST00000559037 CRYBA4P53673 196 aa3.46□□□□□ -1.86
CASC4-207ENST00000559037 HSD52Q0P140 79 aa3.46□□□□□ -1.86
CASC4-207ENST00000559037 FAM74A4Q5TZK3 123 aa3.46□□□□□ -1.86
CASC4-207ENST00000559037 ZFP2Q6ZN57 461 aa3.46□□□□□ -1.86
CASC4-207ENST00000559037 LINC00173Q6ZV60 143 aa3.46□□□□□ -1.86
CASC4-207ENST00000559037 LINC01587Q99440 93 aa3.46□□□□□ -1.86
CASC4-207ENST00000559037 HIGD1BQ9P298 99 aa3.46□□□□□ -1.86
CASC4-207ENST00000559037 BIRC6Q9NR09 4857 aa3.46□□□□□ -1.86
CASC4-207ENST00000559037 PRM2P04554 102 aa3.45□□□□□ -1.86
CASC4-207ENST00000559037 GATA1P15976 413 aaPredicted RBP3.45□□□□□ -1.86
CASC4-207ENST00000559037 AZU1P20160 251 aa3.45□□□□□ -1.86
CASC4-207ENST00000559037 POLR2KP53803 58 aaKnown RBP3.45□□□□□ -1.86
CASC4-207ENST00000559037 EMP1P54849 157 aa3.45□□□□□ -1.86
CASC4-207ENST00000559037 TAL2Q16559 108 aa3.45□□□□□ -1.86
CASC4-207ENST00000559037 RRN3P1Q2M238 152 aa3.45□□□□□ -1.86
CASC4-207ENST00000559037 FAM222AQ5U5X8 452 aa3.45□□□□□ -1.86
CASC4-207ENST00000559037 TMEM263Q8WUH6 116 aaKnown RBP3.45□□□□□ -1.86
CASC4-207ENST00000559037 ORAOV1Q8WV07 137 aa3.45□□□□□ -1.86
CASC4-207ENST00000559037 RPL39LQ96EH5 51 aaKnown RBP3.45□□□□□ -1.86
CASC4-207ENST00000559037 CHTOPQ9Y3Y2 248 aaKnown RBP3.45□□□□□ -1.86
CASC4-207ENST00000559037 KIF25-AS1Q9Y6Z4 181 aa3.45□□□□□ -1.86
CASC4-207ENST00000559037 IGHV3OR16-12A0A075B7B8 117 aa3.44□□□□□ -1.86
CASC4-207ENST00000559037 TRBV10-1A0A0K0K1A3 114 aa3.44□□□□□ -1.86
CASC4-207ENST00000559037 A0A1B0GV90 55 aa3.44□□□□□ -1.86
CASC4-207ENST00000559037 PLAC8L1A1L4L8 177 aa3.44□□□□□ -1.86
CASC4-207ENST00000559037 M0QY20 66 aa3.44□□□□□ -1.86
CASC4-207ENST00000559037 P0DMU3 169 aa3.44□□□□□ -1.86
CASC4-207ENST00000559037 FAM231AP0DMU4 169 aa3.44□□□□□ -1.86
CASC4-207ENST00000559037 FAM231CP0DMU5 169 aa3.44□□□□□ -1.86
CASC4-207ENST00000559037 HTN1P15515 57 aa3.44□□□□□ -1.86
CASC4-207ENST00000559037 HINT1P49773 126 aaPredicted RBP3.44□□□□□ -1.86
CASC4-207ENST00000559037 PMVKQ15126 192 aa3.44□□□□□ -1.86
CASC4-207ENST00000559037 MAJINQ3KP22 176 aa3.44□□□□□ -1.86
CASC4-207ENST00000559037 KRTAP5-4Q6L8H1 288 aa3.44□□□□□ -1.86
CASC4-207ENST00000559037 C16orf74Q96GX8 76 aa3.44□□□□□ -1.86
CASC4-207ENST00000559037 Q9H8V8 135 aa3.44□□□□□ -1.86
CASC4-207ENST00000559037 SPANXA1Q9NS26 97 aa3.44□□□□□ -1.86
CASC4-207ENST00000559037 MRPL35Q9NZE8 188 aaKnown RBP3.44□□□□□ -1.86
CASC4-207ENST00000559037 TEX48A0A1B0GUV7 120 aa3.43□□□□□ -1.86
CASC4-207ENST00000559037 IGHV3-53P01767 116 aa3.43□□□□□ -1.86
CASC4-207ENST00000559037 CRYGDP07320 174 aa3.43□□□□□ -1.86
CASC4-207ENST00000559037 DSCR10P59022 87 aa3.43□□□□□ -1.86
CASC4-207ENST00000559037 LINC00315P59091 139 aa3.43□□□□□ -1.86
CASC4-207ENST00000559037 COTL1Q14019 142 aa3.43□□□□□ -1.86
CASC4-207ENST00000559037 MPV17L2Q567V2 206 aa3.43□□□□□ -1.86
CASC4-207ENST00000559037 BVES-AS1Q5T3Y7 98 aa3.43□□□□□ -1.86
CASC4-207ENST00000559037 LYRM7Q5U5X0 104 aa3.43□□□□□ -1.86
CASC4-207ENST00000559037 Q6ZQT7 251 aa3.43□□□□□ -1.86
CASC4-207ENST00000559037 Q6ZR54 194 aa3.43□□□□□ -1.86
CASC4-207ENST00000559037 Q6ZRP5 223 aa3.43□□□□□ -1.86
CASC4-207ENST00000559037 GTF2H5Q6ZYL4 71 aa3.43□□□□□ -1.86
CASC4-207ENST00000559037 BAALCQ8WXS3 180 aa3.43□□□□□ -1.86
CASC4-207ENST00000559037 DNAH17Q9UFH2 4485 aa3.42□□□□□ -1.86
CASC4-207ENST00000559037 TRAV4A0A0B4J268 109 aa3.42□□□□□ -1.86
CASC4-207ENST00000559037 C11orf86A6NJI1 115 aa3.42□□□□□ -1.86
CASC4-207ENST00000559037 LYRM9A8MSI8 78 aa3.42□□□□□ -1.86
CASC4-207ENST00000559037 E9PLD3 99 aa3.42□□□□□ -1.86
CASC4-207ENST00000559037 RS1O15537 224 aa3.42□□□□□ -1.86
CASC4-207ENST00000559037 FGF6P10767 208 aa3.42□□□□□ -1.86
CASC4-207ENST00000559037 ZNF25P17030 456 aaPredicted RBP3.42□□□□□ -1.86
CASC4-207ENST00000559037 DAZ2Q13117 558 aaKnown RBP3.42□□□□□ -1.86
CASC4-207ENST00000559037 SCGB1D4Q6XE38 83 aa3.42□□□□□ -1.86
CASC4-207ENST00000559037 DAZ4Q86SG3 579 aaKnown RBP3.42□□□□□ -1.86
CASC4-207ENST00000559037 LINC00612Q8N6U2 182 aa3.42□□□□□ -1.86
CASC4-207ENST00000559037 C20orf203Q8NBC4 194 aa3.42□□□□□ -1.86
CASC4-207ENST00000559037 OR4C5Q8NGB2 326 aa3.42□□□□□ -1.86
CASC4-207ENST00000559037 PLEKHB2Q96CS7 222 aa3.42□□□□□ -1.86
CASC4-207ENST00000559037 CHAC1Q9BUX1 264 aa3.42□□□□□ -1.86
CASC4-207ENST00000559037 VCX2Q9H322 139 aa3.42□□□□□ -1.86
CASC4-207ENST00000559037 DAZ3Q9NR90 486 aaKnown RBP3.42□□□□□ -1.86
CASC4-207ENST00000559037 FAT2Q9NYQ8 4349 aa3.41□□□□□ -1.86
CASC4-207ENST00000559037 TRGV1A0A0A0MS02 117 aa3.41□□□□□ -1.86
CASC4-207ENST00000559037 TRAV8-6A0A0B4J262 113 aa3.41□□□□□ -1.86
CASC4-207ENST00000559037 MYMXA0A1B0GTQ4 84 aa3.41□□□□□ -1.86
CASC4-207ENST00000559037 IGIPA6NJ69 53 aa3.41□□□□□ -1.86
CASC4-207ENST00000559037 H3BRM9 83 aa3.41□□□□□ -1.86
CASC4-207ENST00000559037 RTL8CO15255 209 aa3.41□□□□□ -1.86
CASC4-207ENST00000559037 SMIM13P0DJ93 91 aa3.41□□□□□ -1.86
CASC4-207ENST00000559037 LGALS3P17931 250 aaKnown RBP3.41□□□□□ -1.86
CASC4-207ENST00000559037 DAD1P61803 113 aa3.41□□□□□ -1.86
CASC4-207ENST00000559037 VAMP3Q15836 100 aa3.41□□□□□ -1.86
CASC4-207ENST00000559037 CFAP126Q5VTH2 177 aa3.41□□□□□ -1.86
CASC4-207ENST00000559037 C2orf91Q6ZV80 131 aa3.41□□□□□ -1.86
CASC4-207ENST00000559037 C11orf72Q8NBR9 251 aa3.41□□□□□ -1.86
CASC4-207ENST00000559037 RNASE8Q8TDE3 154 aaKnown RBP3.41□□□□□ -1.86
CASC4-207ENST00000559037 COPS9Q8WXC6 57 aa3.41□□□□□ -1.86
CASC4-207ENST00000559037 HIST1H4GQ99525 98 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms