RNA–Protein interactions for RNA: ENST00000558847.1

CASC4-206, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-206ENST00000558847 CHD9Q3L8U1 2897 aa0.09□□□□□ -2.39
CASC4-206ENST00000558847 SSPOA2VEC9 5147 aa0.09□□□□□ -2.39
CASC4-206ENST00000558847 ARHGAP5Q13017 1502 aa0.09□□□□□ -2.39
CASC4-206ENST00000558847 EHBP1L1Q8N3D4 1523 aa0.09□□□□□ -2.39
CASC4-206ENST00000558847 UBR5O95071 2799 aaPredicted RBP0.09□□□□□ -2.39
CASC4-206ENST00000558847 FXYD6-FXYD2A0A087WZ82 144 aa0.09□□□□□ -2.4
CASC4-206ENST00000558847 TMEM262E9PQX1 116 aa0.09□□□□□ -2.4
CASC4-206ENST00000558847 C12orf57Q99622 126 aa0.09□□□□□ -2.4
CASC4-206ENST00000558847 PRO1933Q9H354 126 aa0.09□□□□□ -2.4
CASC4-206ENST00000558847 POLA1P09884 1462 aaPredicted RBP0.09□□□□□ -2.4
CASC4-206ENST00000558847 DOPEY2Q9Y3R5 2298 aa0.08□□□□□ -2.4
CASC4-206ENST00000558847 HMGXB3Q12766 1538 aa0.08□□□□□ -2.4
CASC4-206ENST00000558847 SPRR1AP35321 89 aa0.08□□□□□ -2.4
CASC4-206ENST00000558847 HSD52Q0P140 79 aa0.08□□□□□ -2.4
CASC4-206ENST00000558847 SPRR2GQ9BYE4 73 aa0.08□□□□□ -2.4
CASC4-206ENST00000558847 ZNF292O60281 2723 aa0.08□□□□□ -2.4
CASC4-206ENST00000558847 DIP2CQ9Y2E4 1556 aa0.07□□□□□ -2.4
CASC4-206ENST00000558847 A0A1B0GWA3 101 aa0.07□□□□□ -2.4
CASC4-206ENST00000558847 CRYM-AS1A6NIL9 109 aa0.07□□□□□ -2.4
CASC4-206ENST00000558847 S100PP25815 95 aa0.07□□□□□ -2.4
CASC4-206ENST00000558847 GOLGA4Q13439 2230 aaKnown RBP0.07□□□□□ -2.4
CASC4-206ENST00000558847 TCHHQ07283 1943 aa0.07□□□□□ -2.4
CASC4-206ENST00000558847 MYO7BQ6PIF6 2116 aa0.07□□□□□ -2.4
CASC4-206ENST00000558847 NCOR1O75376 2440 aa0.06□□□□□ -2.4
CASC4-206ENST00000558847 NSD3Q9BZ95 1437 aa0.06□□□□□ -2.4
CASC4-206ENST00000558847 WNK2Q9Y3S1 2297 aa0.06□□□□□ -2.4
CASC4-206ENST00000558847 SAA2P0DJI9 122 aaPredicted RBP0.06□□□□□ -2.4
CASC4-206ENST00000558847 COX6B1P14854 86 aa0.06□□□□□ -2.4
CASC4-206ENST00000558847 SNCAP37840 140 aa0.06□□□□□ -2.4
CASC4-206ENST00000558847 C10orf113Q5VZT2 155 aa0.06□□□□□ -2.4
CASC4-206ENST00000558847 CGREF1Q99674 301 aa0.06□□□□□ -2.4
CASC4-206ENST00000558847 PAPPAQ13219 1627 aa0.05□□□□□ -2.4
CASC4-206ENST00000558847 KDM5AP29375 1690 aaKnown RBP0.05□□□□□ -2.4
CASC4-206ENST00000558847 ARHGEF12Q9NZN5 1544 aa0.05□□□□□ -2.4
CASC4-206ENST00000558847 TRBV7-4A0A0J9YYF1 115 aa0.05□□□□□ -2.4
CASC4-206ENST00000558847 DEFB123Q8N688 67 aa0.05□□□□□ -2.4
CASC4-206ENST00000558847 ARHGEF5Q12774 1597 aa0.05□□□□□ -2.4
CASC4-206ENST00000558847 ANK2Q01484 3957 aa0.05□□□□□ -2.4
CASC4-206ENST00000558847 PPRC1Q5VV67 1664 aaKnown RBP0.05□□□□□ -2.4
CASC4-206ENST00000558847 COL7A1Q02388 2944 aa0.04□□□□□ -2.4
CASC4-206ENST00000558847 MAGI1Q96QZ7 1491 aaPredicted RBP0.04□□□□□ -2.4
CASC4-206ENST00000558847 TCEAL7Q9BRU2 100 aa0.04□□□□□ -2.4
CASC4-206ENST00000558847 MRC2Q9UBG0 1479 aa0.03□□□□□ -2.4
CASC4-206ENST00000558847 LINC00846Q9NV44 126 aa0.03□□□□□ -2.4
CASC4-206ENST00000558847 TET3O43151 1660 aa0.02□□□□□ -2.41
CASC4-206ENST00000558847 FDCSPQ8NFU4 85 aa0.02□□□□□ -2.41
CASC4-206ENST00000558847 USF3Q68DE3 2245 aa0.02□□□□□ -2.41
CASC4-206ENST00000558847 SPHKAPQ2M3C7 1700 aa0.01□□□□□ -2.41
CASC4-206ENST00000558847 CACNA1AO00555 2505 aa0.01□□□□□ -2.41
CASC4-206ENST00000558847 FAM223BA6NKX1 122 aa0.01□□□□□ -2.41
CASC4-206ENST00000558847 NDUFC1O43677 76 aa0.01□□□□□ -2.41
CASC4-206ENST00000558847 SEC11AP67812 179 aa0.01□□□□□ -2.41
CASC4-206ENST00000558847 LINC01600Q96MT4 127 aa0.01□□□□□ -2.41
CASC4-206ENST00000558847 ADGRL2O95490 1459 aa0.01□□□□□ -2.41
CASC4-206ENST00000558847 GAPVD1Q14C86 1478 aa0.01□□□□□ -2.41
CASC4-206ENST00000558847 SFTA2Q6UW10 78 aa0□□□□□ -2.41
CASC4-206ENST00000558847 VAMP8Q9BV40 100 aa0□□□□□ -2.41
CASC4-206ENST00000558847 SPTBN1Q01082 2364 aaKnown RBP-0.01□□□□□ -2.41
CASC4-206ENST00000558847 TULP4Q9NRJ4 1543 aa-0.01□□□□□ -2.41
CASC4-206ENST00000558847 TMEM218A2RU14 115 aa-0.01□□□□□ -2.41
CASC4-206ENST00000558847 SETBP1Q9Y6X0 1596 aa-0.02□□□□□ -2.41
CASC4-206ENST00000558847 hADV29S1A0JD25 119 aa-0.02□□□□□ -2.41
CASC4-206ENST00000558847 ZFYVE16Q7Z3T8 1539 aa-0.03□□□□□ -2.41
CASC4-206ENST00000558847 CELSR1Q9NYQ6 3014 aa-0.03□□□□□ -2.41
CASC4-206ENST00000558847 C1orf167Q5SNV9 1468 aa-0.03□□□□□ -2.41
CASC4-206ENST00000558847 USMG5Q96IX5 58 aa-0.03□□□□□ -2.41
CASC4-206ENST00000558847 TOP2BQ02880 1626 aa-0.03□□□□□ -2.41
CASC4-206ENST00000558847 BTAF1O14981 1849 aa-0.03□□□□□ -2.42
CASC4-206ENST00000558847 FLNCQ14315 2725 aa-0.04□□□□□ -2.42
CASC4-206ENST00000558847 SPRR1BP22528 89 aa-0.04□□□□□ -2.42
CASC4-206ENST00000558847 LINC00959A0A1B0GUT2 108 aa-0.05□□□□□ -2.42
CASC4-206ENST00000558847 SPINK4O60575 86 aa-0.05□□□□□ -2.42
CASC4-206ENST00000558847 ABCC5O15440 1437 aa-0.05□□□□□ -2.42
CASC4-206ENST00000558847 PEG3Q9GZU2 1588 aa-0.06□□□□□ -2.42
CASC4-206ENST00000558847 TRAV30A0A087WSZ9 112 aa-0.06□□□□□ -2.42
CASC4-206ENST00000558847 GNGT2O14610 69 aa-0.06□□□□□ -2.42
CASC4-206ENST00000558847 COX8AP10176 69 aa-0.06□□□□□ -2.42
CASC4-206ENST00000558847 C14orf144Q96I85 54 aa-0.06□□□□□ -2.42
CASC4-206ENST00000558847 AP4S1Q9Y587 144 aa-0.06□□□□□ -2.42
CASC4-206ENST00000558847 NSD1Q96L73 2696 aaPredicted RBP-0.07□□□□□ -2.42
CASC4-206ENST00000558847 PMCHL1Q16048 86 aa-0.07□□□□□ -2.42
CASC4-206ENST00000558847 CACFD1Q9UGQ2 172 aa-0.07□□□□□ -2.42
CASC4-206ENST00000558847 DSTQ03001 7570 aaKnown RBP-0.08□□□□□ -2.42
CASC4-206ENST00000558847 CCDC141Q6ZP82 1450 aa-0.08□□□□□ -2.42
CASC4-206ENST00000558847 CC2D2AQ9P2K1 1620 aa-0.08□□□□□ -2.42
CASC4-206ENST00000558847 GVINP1Q7Z2Y8 2422 aa-0.08□□□□□ -2.42
CASC4-206ENST00000558847 CHD6Q8TD26 2715 aa-0.08□□□□□ -2.42
CASC4-206ENST00000558847 SYS1-DBNDD2H3BUS1 97 aa-0.08□□□□□ -2.42
CASC4-206ENST00000558847 K7EQZ3 153 aa-0.08□□□□□ -2.42
CASC4-206ENST00000558847 MPC2O95563 127 aa-0.08□□□□□ -2.42
CASC4-206ENST00000558847 A0A0G2JMZ2 1700 aa-0.08□□□□□ -2.42
CASC4-206ENST00000558847 TENM4Q6N022 2769 aa-0.08□□□□□ -2.42
CASC4-206ENST00000558847 PIEZO2Q9H5I5 2752 aa-0.08□□□□□ -2.42
CASC4-206ENST00000558847 TOPAZ1Q8N9V7 1692 aa-0.08□□□□□ -2.42
CASC4-206ENST00000558847 TRBV25-1A0A075B6N4 114 aa-0.09□□□□□ -2.42
CASC4-206ENST00000558847 C7orf77A4D0Y5 90 aa-0.09□□□□□ -2.42
CASC4-206ENST00000558847 H3BQF6 201 aa-0.09□□□□□ -2.42
CASC4-206ENST00000558847 LINC00032P0C843 101 aa-0.09□□□□□ -2.42
CASC4-206ENST00000558847 SCN7AQ01118 1682 aa-0.1□□□□□ -2.43
CASC4-206ENST00000558847 SPRR2DP22532 72 aa-0.1□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 125.2 ms