RNA–Protein interactions for RNA: ENST00000558787.1

MARK3-215, Transcript of microtubule affinity regulating kinase 3, human

TSL 2

Gene MARK3, Length 758 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MARK3-215	ENST00000558787	G0S2	P27469	103 aa		4.53	□□□□□ -1.68
MARK3-215	ENST00000558787	HIST1H2BB	P33778	126 aa		4.53	□□□□□ -1.68
MARK3-215	ENST00000558787	IFI27	P40305	119 aa	Predicted RBP	4.53	□□□□□ -1.68
MARK3-215	ENST00000558787	HIST1H2BD	P58876	126 aa		4.53	□□□□□ -1.68
MARK3-215	ENST00000558787	KRTAP10-4	P60372	401 aa	Predicted RBP	4.53	□□□□□ -1.68
MARK3-215	ENST00000558787	HIST1H2BC	P62807	126 aa		4.53	□□□□□ -1.68
MARK3-215	ENST00000558787	HIST2H2BE	Q16778	126 aa		4.53	□□□□□ -1.68
MARK3-215	ENST00000558787	ORMDL2	Q53FV1	153 aa		4.53	□□□□□ -1.68
MARK3-215	ENST00000558787	HIST2H2BF	Q5QNW6	126 aa	Predicted RBP	4.53	□□□□□ -1.68
MARK3-215	ENST00000558787	FA2H	Q7L5A8	372 aa		4.53	□□□□□ -1.68
MARK3-215	ENST00000558787	BAGE3	Q86Y29	109 aa		4.53	□□□□□ -1.68
MARK3-215	ENST00000558787	HIST1H2BH	Q93079	126 aa		4.53	□□□□□ -1.68
MARK3-215	ENST00000558787	CHCHD1	Q96BP2	118 aa	Known RBP	4.53	□□□□□ -1.68
MARK3-215	ENST00000558787	HIST1H2BN	Q99877	126 aa		4.53	□□□□□ -1.68
MARK3-215	ENST00000558787	HIST1H2BM	Q99879	126 aa		4.53	□□□□□ -1.68
MARK3-215	ENST00000558787	FAT3	Q8TDW7	4589 aa		4.53	□□□□□ -1.68
MARK3-215	ENST00000558787	LINC01546	A6NGU7	62 aa		4.52	□□□□□ -1.69
MARK3-215	ENST00000558787	CRP	P02741	224 aa		4.52	□□□□□ -1.69
MARK3-215	ENST00000558787	PRSS1	P07477	247 aa		4.52	□□□□□ -1.69
MARK3-215	ENST00000558787	LINC00614	P0C842	121 aa		4.52	□□□□□ -1.69
MARK3-215	ENST00000558787	FCER1G	P30273	86 aa		4.52	□□□□□ -1.69
MARK3-215	ENST00000558787	RBX1	P62877	108 aa		4.52	□□□□□ -1.69
MARK3-215	ENST00000558787	COTL1	Q14019	142 aa		4.52	□□□□□ -1.69
MARK3-215	ENST00000558787	KRTAP26-1	Q6PEX3	210 aa		4.52	□□□□□ -1.69
MARK3-215	ENST00000558787	LINC00269	Q8N2A0	174 aa		4.52	□□□□□ -1.69
MARK3-215	ENST00000558787	CHCHD7	Q9BUK0	85 aa		4.52	□□□□□ -1.69
MARK3-215	ENST00000558787	IGLV10-54	A0A075B6I4	117 aa		4.51	□□□□□ -1.69
MARK3-215	ENST00000558787	TRBV25-1	A0A075B6N4	114 aa		4.51	□□□□□ -1.69
MARK3-215	ENST00000558787	IGHV1-24	A0A0C4DH33	117 aa		4.51	□□□□□ -1.69
MARK3-215	ENST00000558787	LINC01549	A6NIU2	74 aa		4.51	□□□□□ -1.69
MARK3-215	ENST00000558787	PANO1	I0J062	215 aa		4.51	□□□□□ -1.69
MARK3-215	ENST00000558787	TSHB	P01222	138 aa		4.51	□□□□□ -1.69
MARK3-215	ENST00000558787	S100A6	P06703	90 aa		4.51	□□□□□ -1.69
MARK3-215	ENST00000558787	PKIA	P61925	76 aa		4.51	□□□□□ -1.69
MARK3-215	ENST00000558787	SMAGP	Q0VAQ4	97 aa		4.51	□□□□□ -1.69
MARK3-215	ENST00000558787	IQCJ	Q1A5X6	159 aa		4.51	□□□□□ -1.69
MARK3-215	ENST00000558787	COA6	Q5JTJ3	125 aa	Known RBP	4.51	□□□□□ -1.69
MARK3-215	ENST00000558787	RNASEK	Q6P5S7	137 aa	Known RBP	4.51	□□□□□ -1.69
MARK3-215	ENST00000558787		Q8N9P0	234 aa	Predicted RBP	4.51	□□□□□ -1.69
MARK3-215	ENST00000558787	TMEM18	Q96B42	140 aa		4.51	□□□□□ -1.69
MARK3-215	ENST00000558787	PKHD1L1	Q86WI1	4243 aa		4.5	□□□□□ -1.69
MARK3-215	ENST00000558787	HSBP1	O75506	76 aa		4.5	□□□□□ -1.69
MARK3-215	ENST00000558787	AMT	P48728	403 aa		4.5	□□□□□ -1.69
MARK3-215	ENST00000558787	HNRNPA3	P51991	378 aa	Known RBP	4.5	□□□□□ -1.69
MARK3-215	ENST00000558787	MIA	Q16674	131 aa		4.5	□□□□□ -1.69
MARK3-215	ENST00000558787	TMEM243	Q9BU79	118 aa		4.5	□□□□□ -1.69
MARK3-215	ENST00000558787	PRR34	Q9NV39	138 aa		4.5	□□□□□ -1.69
MARK3-215	ENST00000558787	IGLV4-60	A0A075B6I1	120 aa		4.49	□□□□□ -1.69
MARK3-215	ENST00000558787		H7C423	109 aa		4.49	□□□□□ -1.69
MARK3-215	ENST00000558787	UBE2L6	O14933	153 aa		4.49	□□□□□ -1.69
MARK3-215	ENST00000558787	SERF1A	O75920	110 aa		4.49	□□□□□ -1.69
MARK3-215	ENST00000558787	ESD	P10768	282 aa		4.49	□□□□□ -1.69
MARK3-215	ENST00000558787	NDUFA6	P56556	154 aa		4.49	□□□□□ -1.69
MARK3-215	ENST00000558787	C14orf177	Q52M58	125 aa		4.49	□□□□□ -1.69
MARK3-215	ENST00000558787	C20orf203	Q8NBC4	194 aa		4.49	□□□□□ -1.69
MARK3-215	ENST00000558787	HBD	P02042	147 aa		4.48	□□□□□ -1.69
MARK3-215	ENST00000558787	ZNF25	P17030	456 aa	Predicted RBP	4.48	□□□□□ -1.69
MARK3-215	ENST00000558787	RPL37A	P61513	92 aa	Known RBP	4.48	□□□□□ -1.69
MARK3-215	ENST00000558787	REG3A	Q06141	175 aa		4.48	□□□□□ -1.69
MARK3-215	ENST00000558787	LCE1A	Q5T7P2	110 aa		4.48	□□□□□ -1.69
MARK3-215	ENST00000558787	SDIM1	Q6ZPB5	146 aa		4.48	□□□□□ -1.69
MARK3-215	ENST00000558787	C9orf163	Q8N9P6	203 aa		4.48	□□□□□ -1.69
MARK3-215	ENST00000558787	URB1-AS1	Q96HZ7	61 aa		4.48	□□□□□ -1.69
MARK3-215	ENST00000558787	SPANXA1	Q9NS26	97 aa		4.48	□□□□□ -1.69
MARK3-215	ENST00000558787	CYSLTR1	Q9Y271	337 aa		4.48	□□□□□ -1.69
MARK3-215	ENST00000558787	IGKV3OR2-268	A0A0C4DH90	116 aa		4.47	□□□□□ -1.69
MARK3-215	ENST00000558787	hDV102S1	A0JD36	115 aa		4.47	□□□□□ -1.69
MARK3-215	ENST00000558787	ATP5L	O75964	103 aa		4.47	□□□□□ -1.69
MARK3-215	ENST00000558787	NPS	P0C0P6	89 aa		4.47	□□□□□ -1.69
MARK3-215	ENST00000558787	PAPPA-AS1	Q5QFB9	102 aa		4.47	□□□□□ -1.69
MARK3-215	ENST00000558787	AMMECR1L	Q6DCA0	310 aa		4.47	□□□□□ -1.69
MARK3-215	ENST00000558787	DGAT2L7P	Q6IED9	249 aa		4.47	□□□□□ -1.69
MARK3-215	ENST00000558787	C2orf66	Q6UXQ4	117 aa		4.47	□□□□□ -1.69
MARK3-215	ENST00000558787	MRPL52	Q86TS9	123 aa	Known RBP	4.47	□□□□□ -1.69
MARK3-215	ENST00000558787	TOMM6	Q96B49	74 aa		4.47	□□□□□ -1.69
MARK3-215	ENST00000558787	TMEM101	Q96IK0	257 aa		4.47	□□□□□ -1.69
MARK3-215	ENST00000558787	PACRG	Q96M98	296 aa	Predicted RBP	4.47	□□□□□ -1.69
MARK3-215	ENST00000558787	SCGB3A1	Q96QR1	104 aa		4.47	□□□□□ -1.69
MARK3-215	ENST00000558787	TIMM21	Q9BVV7	248 aa		4.47	□□□□□ -1.69
MARK3-215	ENST00000558787	HSPB8	Q9UJY1	196 aa		4.47	□□□□□ -1.69
MARK3-215	ENST00000558787	PYGO1	Q9Y3Y4	419 aa		4.47	□□□□□ -1.69
MARK3-215	ENST00000558787	CSDC2	Q9Y534	153 aa	Known RBP	4.47	□□□□□ -1.69
MARK3-215	ENST00000558787	HMCN2	Q8NDA2	5059 aa		4.47	□□□□□ -1.69
MARK3-215	ENST00000558787	IGKV2D-29	A0A075B6S2	120 aa	Predicted RBP	4.46	□□□□□ -1.7
MARK3-215	ENST00000558787		A0A1B0GUV1	79 aa		4.46	□□□□□ -1.7
MARK3-215	ENST00000558787	IGKV2-29	A2NJV5	120 aa	Predicted RBP	4.46	□□□□□ -1.7
MARK3-215	ENST00000558787	C5orf52	A6NGY3	159 aa		4.46	□□□□□ -1.7
MARK3-215	ENST00000558787	NUPR1	O60356	82 aa		4.46	□□□□□ -1.7
MARK3-215	ENST00000558787	LEPROTL1	O95214	131 aa		4.46	□□□□□ -1.7
MARK3-215	ENST00000558787	CHTF8	P0CG12	524 aa		4.46	□□□□□ -1.7
MARK3-215	ENST00000558787	FGF6	P10767	208 aa		4.46	□□□□□ -1.7
MARK3-215	ENST00000558787	S100A2	P29034	98 aa		4.46	□□□□□ -1.7
MARK3-215	ENST00000558787	PMCHL1	Q16048	86 aa		4.46	□□□□□ -1.7
MARK3-215	ENST00000558787	PDZD11	Q5EBL8	140 aa		4.46	□□□□□ -1.7
MARK3-215	ENST00000558787	ERAS	Q7Z444	233 aa		4.46	□□□□□ -1.7
MARK3-215	ENST00000558787	FAM19A2	Q8N3H0	131 aa		4.46	□□□□□ -1.7
MARK3-215	ENST00000558787	DPH3	Q96FX2	82 aa		4.46	□□□□□ -1.7
MARK3-215	ENST00000558787	TMEM141	Q96I45	108 aa		4.46	□□□□□ -1.7
MARK3-215	ENST00000558787	TIMM17A	Q99595	171 aa		4.46	□□□□□ -1.7
MARK3-215	ENST00000558787		A0A096LNJ9	63 aa		4.45	□□□□□ -1.7

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