RNA–Protein interactions for RNA: ENST00000558400.1

TPM1-213, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-213ENST00000558400 LINC01549A6NIU2 74 aa5.48□□□□□ -1.53
TPM1-213ENST00000558400 ZNF561-AS1K7EIQ3 104 aa5.48□□□□□ -1.53
TPM1-213ENST00000558400 COX7A2LO14548 114 aa5.48□□□□□ -1.53
TPM1-213ENST00000558400 APOMO95445 188 aa5.48□□□□□ -1.53
TPM1-213ENST00000558400 SMR3BP02814 79 aaPredicted RBP5.48□□□□□ -1.53
TPM1-213ENST00000558400 PAPPA-AS1Q5QFB9 102 aa5.48□□□□□ -1.53
TPM1-213ENST00000558400 C15orf56Q8N910 161 aa5.48□□□□□ -1.53
TPM1-213ENST00000558400 DPH3Q96FX2 82 aa5.48□□□□□ -1.53
TPM1-213ENST00000558400 SMCO4Q9NRQ5 59 aa5.48□□□□□ -1.53
TPM1-213ENST00000558400 CYSLTR1Q9Y271 337 aa5.48□□□□□ -1.53
TPM1-213ENST00000558400 FLG2Q5D862 2391 aaPredicted RBP5.48□□□□□ -1.53
TPM1-213ENST00000558400 GHRHP01286 108 aa5.47□□□□□ -1.53
TPM1-213ENST00000558400 SLPIP03973 132 aa5.47□□□□□ -1.53
TPM1-213ENST00000558400 LCE3BQ5TA77 95 aa5.47□□□□□ -1.53
TPM1-213ENST00000558400 Q6ZN92 141 aa5.47□□□□□ -1.53
TPM1-213ENST00000558400 Q6ZUT4 128 aa5.47□□□□□ -1.53
TPM1-213ENST00000558400 PRSS3P2Q8NHM4 247 aa5.47□□□□□ -1.53
TPM1-213ENST00000558400 MRPL18Q9H0U6 180 aaKnown RBP5.47□□□□□ -1.53
TPM1-213ENST00000558400 F8WDY8 70 aa5.46□□□□□ -1.54
TPM1-213ENST00000558400 PLA2G1BP04054 148 aaKnown RBP5.46□□□□□ -1.54
TPM1-213ENST00000558400 INAFM2P0DMQ5 153 aa5.46□□□□□ -1.54
TPM1-213ENST00000558400 FABP9Q0Z7S8 132 aa5.46□□□□□ -1.54
TPM1-213ENST00000558400 KIAA1644Q3SXP7 199 aa5.46□□□□□ -1.54
TPM1-213ENST00000558400 HIGD2BQ4VC39 106 aa5.46□□□□□ -1.54
TPM1-213ENST00000558400 RNASE13Q5GAN3 156 aaKnown RBP5.46□□□□□ -1.54
TPM1-213ENST00000558400 Q5VSD8 79 aa5.46□□□□□ -1.54
TPM1-213ENST00000558400 C2orf66Q6UXQ4 117 aa5.46□□□□□ -1.54
TPM1-213ENST00000558400 SCXQ7RTU7 201 aa5.46□□□□□ -1.54
TPM1-213ENST00000558400 KRTAP19-1Q8IUB9 90 aa5.46□□□□□ -1.54
TPM1-213ENST00000558400 CIRBP-AS1Q8TBR5 109 aa5.46□□□□□ -1.54
TPM1-213ENST00000558400 TMEM141Q96I45 108 aa5.46□□□□□ -1.54
TPM1-213ENST00000558400 VCX2Q9H322 139 aa5.46□□□□□ -1.54
TPM1-213ENST00000558400 MYCBP2O75592 4640 aa5.46□□□□□ -1.54
TPM1-213ENST00000558400 TGIF2-C20orf24A0A0A6YYL0 155 aa5.45□□□□□ -1.54
TPM1-213ENST00000558400 IFITM10A6NMD0 228 aa5.45□□□□□ -1.54
TPM1-213ENST00000558400 TEX43Q6ZNM6 134 aa5.45□□□□□ -1.54
TPM1-213ENST00000558400 FAM104AQ969W3 186 aa5.45□□□□□ -1.54
TPM1-213ENST00000558400 OPRPNQ99935 248 aaPredicted RBP5.45□□□□□ -1.54
TPM1-213ENST00000558400 C2orf88Q9BSF0 95 aa5.45□□□□□ -1.54
TPM1-213ENST00000558400 ALKBH7Q9BT30 221 aaPredicted RBP5.45□□□□□ -1.54
TPM1-213ENST00000558400 LINC00474Q9P2X8 69 aa5.45□□□□□ -1.54
TPM1-213ENST00000558400 IGLV4-3A0A075B6K6 122 aa5.44□□□□□ -1.54
TPM1-213ENST00000558400 IGHV3OR16-9A0A0B4J2B5 98 aa5.44□□□□□ -1.54
TPM1-213ENST00000558400 IGIPA6NJ69 53 aa5.44□□□□□ -1.54
TPM1-213ENST00000558400 SEC11AP67812 179 aa5.44□□□□□ -1.54
TPM1-213ENST00000558400 HAMPP81172 84 aa5.44□□□□□ -1.54
TPM1-213ENST00000558400 SYCNQ0VAF6 134 aa5.44□□□□□ -1.54
TPM1-213ENST00000558400 CIRBPQ14011 172 aaKnown RBP5.44□□□□□ -1.54
TPM1-213ENST00000558400 ERASQ7Z444 233 aa5.44□□□□□ -1.54
TPM1-213ENST00000558400 C5orf38Q86SI9 138 aa5.44□□□□□ -1.54
TPM1-213ENST00000558400 OR10D4PQ8NGN7 298 aa5.44□□□□□ -1.54
TPM1-213ENST00000558400 C2orf48Q96LS8 159 aa5.44□□□□□ -1.54
TPM1-213ENST00000558400 TRAPPC1Q9Y5R8 145 aa5.44□□□□□ -1.54
TPM1-213ENST00000558400 DNAH5Q8TE73 4624 aa5.44□□□□□ -1.54
TPM1-213ENST00000558400 LINC01546A6NGU7 62 aa5.43□□□□□ -1.54
TPM1-213ENST00000558400 COLCA2A8K830 154 aa5.43□□□□□ -1.54
TPM1-213ENST00000558400 COX6A2Q02221 97 aa5.43□□□□□ -1.54
TPM1-213ENST00000558400 FA2HQ7L5A8 372 aa5.43□□□□□ -1.54
TPM1-213ENST00000558400 LINC01561Q8N1V8 128 aa5.43□□□□□ -1.54
TPM1-213ENST00000558400 TOMM6Q96B49 74 aa5.43□□□□□ -1.54
TPM1-213ENST00000558400 CARD19Q96LW7 228 aa5.43□□□□□ -1.54
TPM1-213ENST00000558400 YPEL4Q96NS1 127 aa5.43□□□□□ -1.54
TPM1-213ENST00000558400 AMELXQ99217 191 aa5.43□□□□□ -1.54
TPM1-213ENST00000558400 TIMM17AQ99595 171 aa5.43□□□□□ -1.54
TPM1-213ENST00000558400 IGLV4-69A0A075B6H9 119 aa5.42□□□□□ -1.54
TPM1-213ENST00000558400 A0A087WZ39 114 aa5.42□□□□□ -1.54
TPM1-213ENST00000558400 RAB5BP61020 215 aa5.42□□□□□ -1.54
TPM1-213ENST00000558400 RNF151Q2KHN1 245 aa5.42□□□□□ -1.54
TPM1-213ENST00000558400 LINC00242Q5T6M2 205 aa5.42□□□□□ -1.54
TPM1-213ENST00000558400 SCGB3A1Q96QR1 104 aa5.42□□□□□ -1.54
TPM1-213ENST00000558400 CAMK2N2Q96S95 79 aa5.42□□□□□ -1.54
TPM1-213ENST00000558400 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.42□□□□□ -1.54
TPM1-213ENST00000558400 LINC00614P0C842 121 aa5.41□□□□□ -1.54
TPM1-213ENST00000558400 UBE2D1P51668 147 aa5.41□□□□□ -1.54
TPM1-213ENST00000558400 FAM19A3Q7Z5A8 133 aa5.41□□□□□ -1.54
TPM1-213ENST00000558400 LINC00526Q96FQ7 95 aa5.41□□□□□ -1.54
TPM1-213ENST00000558400 KRTAP9-9Q9BYP9 154 aa5.41□□□□□ -1.54
TPM1-213ENST00000558400 KRTAP9-4Q9BYQ2 154 aa5.41□□□□□ -1.54
TPM1-213ENST00000558400 A0A087WYN8 130 aa5.4□□□□□ -1.54
TPM1-213ENST00000558400 LOC107984640A0A0U1RRK4 108 aa5.4□□□□□ -1.54
TPM1-213ENST00000558400 HERVK_113P63121 156 aa5.4□□□□□ -1.54
TPM1-213ENST00000558400 SPAG11BQ08648 103 aa5.4□□□□□ -1.54
TPM1-213ENST00000558400 MAJINQ3KP22 176 aa5.4□□□□□ -1.54
TPM1-213ENST00000558400 SPACA4Q8TDM5 124 aa5.4□□□□□ -1.54
TPM1-213ENST00000558400 ORAOV1Q8WV07 137 aa5.4□□□□□ -1.54
TPM1-213ENST00000558400 GEMIN7Q9H840 131 aaKnown RBP5.4□□□□□ -1.54
TPM1-213ENST00000558400 MRPL35Q9NZE8 188 aaKnown RBP5.4□□□□□ -1.54
TPM1-213ENST00000558400 PLAC8Q9NZF1 115 aa5.4□□□□□ -1.54
TPM1-213ENST00000558400 IGKV2-24A0A0C4DH68 120 aa5.39□□□□□ -1.55
TPM1-213ENST00000558400 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.39□□□□□ -1.55
TPM1-213ENST00000558400 PANO1I0J062 215 aa5.39□□□□□ -1.55
TPM1-213ENST00000558400 NDUFA1O15239 70 aa5.39□□□□□ -1.55
TPM1-213ENST00000558400 Q6ZRU5 148 aa5.39□□□□□ -1.55
TPM1-213ENST00000558400 LINC00173Q6ZV60 143 aa5.39□□□□□ -1.55
TPM1-213ENST00000558400 HMCN2Q8NDA2 5059 aa5.38□□□□□ -1.55
TPM1-213ENST00000558400 CHTF8P0CG12 524 aa5.38□□□□□ -1.55
TPM1-213ENST00000558400 RPL37AP61513 92 aaKnown RBP5.38□□□□□ -1.55
TPM1-213ENST00000558400 STPG4Q8N801 248 aa5.38□□□□□ -1.55
TPM1-213ENST00000558400 C18orf32Q8TCD1 76 aa5.38□□□□□ -1.55
TPM1-213ENST00000558400 C7orf33Q8WU49 177 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms