RNA–Protein interactions for RNA: ENST00000558298.5

RTF1-205, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 5

Gene RTF1, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-205ENST00000558298 SMAD5-AS1Q9Y6J3 95 aa5.85□□□□□ -1.47
RTF1-205ENST00000558298 TRAV26-2A0A0B4J265 109 aa5.84□□□□□ -1.47
RTF1-205ENST00000558298 COX7A2LO14548 114 aa5.84□□□□□ -1.47
RTF1-205ENST00000558298 GAS8-AS1O95177 125 aa5.84□□□□□ -1.47
RTF1-205ENST00000558298 RNASE4P34096 147 aaKnown RBP5.84□□□□□ -1.47
RTF1-205ENST00000558298 MRPS36P82909 103 aaKnown RBP5.84□□□□□ -1.47
RTF1-205ENST00000558298 ANXA2RQ3ZCQ2 193 aa5.84□□□□□ -1.47
RTF1-205ENST00000558298 SERP2Q8N6R1 65 aa5.84□□□□□ -1.47
RTF1-205ENST00000558298 C19orf73Q9NVV2 129 aa5.84□□□□□ -1.47
RTF1-205ENST00000558298 HUWE1Q7Z6Z7 4374 aaKnown RBP5.83□□□□□ -1.48
RTF1-205ENST00000558298 MGPP08493 103 aa5.83□□□□□ -1.48
RTF1-205ENST00000558298 EDN2P20800 178 aa5.83□□□□□ -1.48
RTF1-205ENST00000558298 CMC4P56277 68 aaPredicted RBP5.83□□□□□ -1.48
RTF1-205ENST00000558298 RPL18AQ02543 176 aaKnown RBP5.83□□□□□ -1.48
RTF1-205ENST00000558298 DCANP1Q8TF63 244 aa5.83□□□□□ -1.48
RTF1-205ENST00000558298 C16orf92Q96LL3 132 aa5.83□□□□□ -1.48
RTF1-205ENST00000558298 RHPN1-AS1Q9BWJ2 59 aa5.83□□□□□ -1.48
RTF1-205ENST00000558298 IGHV3-35A0A0C4DH35 117 aa5.82□□□□□ -1.48
RTF1-205ENST00000558298 IGHV1-58A0A0C4DH39 117 aa5.82□□□□□ -1.48
RTF1-205ENST00000558298 I3L3M4 83 aa5.82□□□□□ -1.48
RTF1-205ENST00000558298 C14orf178Q8N769 122 aaPredicted RBP5.82□□□□□ -1.48
RTF1-205ENST00000558298 TENM3Q9P273 2699 aa5.82□□□□□ -1.48
RTF1-205ENST00000558298 RYR3Q15413 4870 aa5.82□□□□□ -1.48
RTF1-205ENST00000558298 TINCRA0A1B0GVN0 87 aa5.81□□□□□ -1.48
RTF1-205ENST00000558298 H7C2G1 150 aa5.81□□□□□ -1.48
RTF1-205ENST00000558298 DNAL4O96015 105 aa5.81□□□□□ -1.48
RTF1-205ENST00000558298 TSHBP01222 138 aa5.81□□□□□ -1.48
RTF1-205ENST00000558298 PRSS2P07478 247 aa5.81□□□□□ -1.48
RTF1-205ENST00000558298 IGHV4-30-4P0DP06 118 aa5.81□□□□□ -1.48
RTF1-205ENST00000558298 TSPEAR-AS2P59090 65 aa5.81□□□□□ -1.48
RTF1-205ENST00000558298 PIK3CD-AS1Q5SR53 167 aa5.81□□□□□ -1.48
RTF1-205ENST00000558298 Q6JHZ5 121 aa5.81□□□□□ -1.48
RTF1-205ENST00000558298 VSIG2Q96IQ7 327 aa5.81□□□□□ -1.48
RTF1-205ENST00000558298 C11orf21Q9P2W6 132 aa5.81□□□□□ -1.48
RTF1-205ENST00000558298 NDUFA12Q9UI09 145 aa5.81□□□□□ -1.48
RTF1-205ENST00000558298 IGHV3-30-3P0DP02 117 aa5.8□□□□□ -1.48
RTF1-205ENST00000558298 ODF3L2Q3SX64 289 aa5.8□□□□□ -1.48
RTF1-205ENST00000558298 C20orf203Q8NBC4 194 aa5.8□□□□□ -1.48
RTF1-205ENST00000558298 RPL39LQ96EH5 51 aaKnown RBP5.8□□□□□ -1.48
RTF1-205ENST00000558298 FAM19A4Q96LR4 140 aa5.8□□□□□ -1.48
RTF1-205ENST00000558298 TM2D3Q9BRN9 247 aa5.8□□□□□ -1.48
RTF1-205ENST00000558298 KIF25-AS1Q9Y6Z4 181 aa5.8□□□□□ -1.48
RTF1-205ENST00000558298 DNAH7Q8WXX0 4024 aa5.8□□□□□ -1.48
RTF1-205ENST00000558298 TRAV13-2A0A0B4J235 113 aa5.79□□□□□ -1.48
RTF1-205ENST00000558298 TRAV13-1A0A0B4J241 112 aa5.79□□□□□ -1.48
RTF1-205ENST00000558298 PRAC2D3DTV9 90 aa5.79□□□□□ -1.48
RTF1-205ENST00000558298 K7EQG2 157 aa5.79□□□□□ -1.48
RTF1-205ENST00000558298 NDUFA1O15239 70 aa5.79□□□□□ -1.48
RTF1-205ENST00000558298 ATP5EP56381 51 aaPredicted RBP5.79□□□□□ -1.48
RTF1-205ENST00000558298 ZFAND2AQ8N6M9 145 aa5.79□□□□□ -1.48
RTF1-205ENST00000558298 KIR2DL5BQ8NHK3 375 aa5.79□□□□□ -1.48
RTF1-205ENST00000558298 IGHV3OR16-8A0A075B7F1 116 aa5.78□□□□□ -1.48
RTF1-205ENST00000558298 TRAV8-3A0A0A6YYJ7 113 aa5.78□□□□□ -1.48
RTF1-205ENST00000558298 TRBV10-3A0A0K0K1G6 114 aa5.78□□□□□ -1.48
RTF1-205ENST00000558298 hADV29S1A0JD25 119 aa5.78□□□□□ -1.48
RTF1-205ENST00000558298 F5H697 171 aa5.78□□□□□ -1.48
RTF1-205ENST00000558298 H0YGX0 51 aa5.78□□□□□ -1.48
RTF1-205ENST00000558298 SOCS3O14543 225 aa5.78□□□□□ -1.48
RTF1-205ENST00000558298 SUMO4Q6EEV6 95 aa5.78□□□□□ -1.48
RTF1-205ENST00000558298 DPH3Q96FX2 82 aa5.78□□□□□ -1.48
RTF1-205ENST00000558298 LITAFQ99732 161 aa5.78□□□□□ -1.48
RTF1-205ENST00000558298 PRO0628Q9UI54 55 aa5.78□□□□□ -1.48
RTF1-205ENST00000558298 STARD9Q9P2P6 4700 aa5.78□□□□□ -1.48
RTF1-205ENST00000558298 F5H768 121 aa5.77□□□□□ -1.49
RTF1-205ENST00000558298 MALP21145 153 aa5.77□□□□□ -1.49
RTF1-205ENST00000558298 LINC00315P59091 139 aa5.77□□□□□ -1.49
RTF1-205ENST00000558298 NPC2P61916 151 aa5.77□□□□□ -1.49
RTF1-205ENST00000558298 C2orf48Q96LS8 159 aa5.77□□□□□ -1.49
RTF1-205ENST00000558298 MAP6D1Q9H9H5 199 aa5.77□□□□□ -1.49
RTF1-205ENST00000558298 RYR2Q92736 4967 aa5.76□□□□□ -1.49
RTF1-205ENST00000558298 IGLV4-3A0A075B6K6 122 aa5.76□□□□□ -1.49
RTF1-205ENST00000558298 RBMY1BA6NDE4 496 aaKnown RBP5.76□□□□□ -1.49
RTF1-205ENST00000558298 RBMY1EA6NEQ0 496 aaKnown RBP5.76□□□□□ -1.49
RTF1-205ENST00000558298 A8MTW9 85 aa5.76□□□□□ -1.49
RTF1-205ENST00000558298 KLLNB2CW77 178 aa5.76□□□□□ -1.49
RTF1-205ENST00000558298 NDUFC1O43677 76 aa5.76□□□□□ -1.49
RTF1-205ENST00000558298 RBMY1DP0C7P1 496 aaKnown RBP5.76□□□□□ -1.49
RTF1-205ENST00000558298 RNASE3P12724 160 aaKnown RBP5.76□□□□□ -1.49
RTF1-205ENST00000558298 TIRAPP58753 221 aa5.76□□□□□ -1.49
RTF1-205ENST00000558298 NBEAL2Q6ZNJ1 2754 aa5.76□□□□□ -1.49
RTF1-205ENST00000558298 CSMD3Q7Z407 3707 aa5.75□□□□□ -1.49
RTF1-205ENST00000558298 IGHV3OR16-13A0A075B7E8 117 aa5.75□□□□□ -1.49
RTF1-205ENST00000558298 IGHV3-49A0A0A0MS15 119 aa5.75□□□□□ -1.49
RTF1-205ENST00000558298 IGHV3-74A0A0B4J1X5 117 aa5.75□□□□□ -1.49
RTF1-205ENST00000558298 F8WDY8 70 aa5.75□□□□□ -1.49
RTF1-205ENST00000558298 M0QY20 66 aa5.75□□□□□ -1.49
RTF1-205ENST00000558298 BAALC-AS2P0C853 105 aa5.75□□□□□ -1.49
RTF1-205ENST00000558298 APOC4P55056 127 aa5.75□□□□□ -1.49
RTF1-205ENST00000558298 SNRPD3P62318 126 aaKnown RBP5.75□□□□□ -1.49
RTF1-205ENST00000558298 DAZ2Q13117 558 aaKnown RBP5.75□□□□□ -1.49
RTF1-205ENST00000558298 DAZ4Q86SG3 579 aaKnown RBP5.75□□□□□ -1.49
RTF1-205ENST00000558298 WWC2-AS2Q96NR7 200 aa5.75□□□□□ -1.49
RTF1-205ENST00000558298 WFDC10AQ9H1F0 79 aa5.75□□□□□ -1.49
RTF1-205ENST00000558298 DAZ3Q9NR90 486 aaKnown RBP5.75□□□□□ -1.49
RTF1-205ENST00000558298 IGLV5-45A0A087WSX0 123 aa5.74□□□□□ -1.49
RTF1-205ENST00000558298 H3BQ85 93 aa5.74□□□□□ -1.49
RTF1-205ENST00000558298 EIF4EBP3O60516 100 aaPredicted RBP5.74□□□□□ -1.49
RTF1-205ENST00000558298 RPL39P62891 51 aaKnown RBP5.74□□□□□ -1.49
RTF1-205ENST00000558298 C9orf85Q96MD7 179 aa5.74□□□□□ -1.49
RTF1-205ENST00000558298 SERP1Q9Y6X1 66 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms