RNA–Protein interactions for RNA: ENST00000558282.5

CSPG4P12-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

BASIC

Gene CSPG4P12, Length 4,853 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-201ENST00000558282 IGHV4-30-2A0A087WSY4 118 aa8.66□□□□□ -1.02
CSPG4P12-201ENST00000558282 MSMPQ1L6U9 139 aa8.66□□□□□ -1.02
CSPG4P12-201ENST00000558282 LINC00208Q96KT6 92 aa8.66□□□□□ -1.02
CSPG4P12-201ENST00000558282 PLAC8L1A1L4L8 177 aa8.65□□□□□ -1.02
CSPG4P12-201ENST00000558282 Q8N6K4 173 aa8.65□□□□□ -1.02
CSPG4P12-201ENST00000558282 C4orf48Q5BLP8 95 aa8.65□□□□□ -1.02
CSPG4P12-201ENST00000558282 MED12LQ86YW9 2145 aa8.65□□□□□ -1.03
CSPG4P12-201ENST00000558282 ALPK3Q96L96 1907 aa8.64□□□□□ -1.03
CSPG4P12-201ENST00000558282 SMCPP49901 116 aaPredicted RBP8.64□□□□□ -1.03
CSPG4P12-201ENST00000558282 SBSPONQ8IVN8 264 aa8.64□□□□□ -1.03
CSPG4P12-201ENST00000558282 hDV103S1A0JD37 113 aa8.64□□□□□ -1.03
CSPG4P12-201ENST00000558282 FAM19A1Q7Z5A9 133 aa8.64□□□□□ -1.03
CSPG4P12-201ENST00000558282 XAGE1AQ9HD64 81 aa8.64□□□□□ -1.03
CSPG4P12-201ENST00000558282 IGLV2-18A0A075B6J9 118 aa8.64□□□□□ -1.03
CSPG4P12-201ENST00000558282 IGHV4-61A0A0C4DH41 118 aa8.64□□□□□ -1.03
CSPG4P12-201ENST00000558282 C14orf177Q52M58 125 aa8.64□□□□□ -1.03
CSPG4P12-201ENST00000558282 A0A087WYN8 130 aa8.63□□□□□ -1.03
CSPG4P12-201ENST00000558282 LINC00242Q5T6M2 205 aa8.63□□□□□ -1.03
CSPG4P12-201ENST00000558282 ESM1Q9NQ30 184 aa8.63□□□□□ -1.03
CSPG4P12-201ENST00000558282 LY6LH3BQJ8 138 aa8.63□□□□□ -1.03
CSPG4P12-201ENST00000558282 ZFP36P26651 326 aaKnown RBP8.63□□□□□ -1.03
CSPG4P12-201ENST00000558282 Q96MF0 132 aa8.63□□□□□ -1.03
CSPG4P12-201ENST00000558282 CDC42SE2Q9NRR3 84 aa8.63□□□□□ -1.03
CSPG4P12-201ENST00000558282 ANKHD1Q8IWZ3 2542 aaKnown RBP8.63□□□□□ -1.03
CSPG4P12-201ENST00000558282 PIEZO2Q9H5I5 2752 aa8.62□□□□□ -1.03
CSPG4P12-201ENST00000558282 SONP18583 2426 aaKnown RBP8.62□□□□□ -1.03
CSPG4P12-201ENST00000558282 SMIM1B2RUZ4 78 aa8.62□□□□□ -1.03
CSPG4P12-201ENST00000558282 PRR9Q5T870 116 aa8.62□□□□□ -1.03
CSPG4P12-201ENST00000558282 DCANP1Q8TF63 244 aa8.62□□□□□ -1.03
CSPG4P12-201ENST00000558282 LINC00959A0A1B0GUT2 108 aa8.62□□□□□ -1.03
CSPG4P12-201ENST00000558282 AMELXQ99217 191 aa8.62□□□□□ -1.03
CSPG4P12-201ENST00000558282 ADAMTSL4-AS1Q5T5F5 129 aa8.62□□□□□ -1.03
CSPG4P12-201ENST00000558282 Q6ZVQ6 151 aa8.62□□□□□ -1.03
CSPG4P12-201ENST00000558282 A0A0J9YWU9 116 aa8.62□□□□□ -1.03
CSPG4P12-201ENST00000558282 MAPK1IP1LQ8NDC0 245 aa8.62□□□□□ -1.03
CSPG4P12-201ENST00000558282 C5orf42Q9H799 3197 aa8.61□□□□□ -1.03
CSPG4P12-201ENST00000558282 UNC80Q8N2C7 3258 aa8.61□□□□□ -1.03
CSPG4P12-201ENST00000558282 LINC01547P58512 204 aaPredicted RBP8.61□□□□□ -1.03
CSPG4P12-201ENST00000558282 SERTAD4-AS1Q5TG53 156 aa8.61□□□□□ -1.03
CSPG4P12-201ENST00000558282 LINC01546A6NGU7 62 aa8.6□□□□□ -1.03
CSPG4P12-201ENST00000558282 PROK1P58294 105 aa8.6□□□□□ -1.03
CSPG4P12-201ENST00000558282 SYCNQ0VAF6 134 aa8.6□□□□□ -1.03
CSPG4P12-201ENST00000558282 KIAA1549LQ6ZVL6 1849 aa8.6□□□□□ -1.03
CSPG4P12-201ENST00000558282 CHD7Q9P2D1 2997 aa8.6□□□□□ -1.03
CSPG4P12-201ENST00000558282 CDH23Q9H251 3354 aa8.6□□□□□ -1.03
CSPG4P12-201ENST00000558282 SZT2Q5T011 3432 aa8.6□□□□□ -1.03
CSPG4P12-201ENST00000558282 Q6ZSV7 163 aa8.59□□□□□ -1.03
CSPG4P12-201ENST00000558282 MYO9AB2RTY4 2548 aa8.59□□□□□ -1.03
CSPG4P12-201ENST00000558282 F8W735 103 aaPredicted RBP8.58□□□□□ -1.04
CSPG4P12-201ENST00000558282 NANOS2P60321 138 aaKnown RBP8.58□□□□□ -1.04
CSPG4P12-201ENST00000558282 PIP4P1Q86T03 277 aa8.58□□□□□ -1.04
CSPG4P12-201ENST00000558282 HILS1P60008 231 aa8.57□□□□□ -1.04
CSPG4P12-201ENST00000558282 PCDH15Q96QU1 1955 aa8.57□□□□□ -1.04
CSPG4P12-201ENST00000558282 TNFRSF13BO14836 293 aaPredicted RBP8.57□□□□□ -1.04
CSPG4P12-201ENST00000558282 LINC01548A6NM66 108 aa8.57□□□□□ -1.04
CSPG4P12-201ENST00000558282 DEFB135Q30KP9 77 aa8.57□□□□□ -1.04
CSPG4P12-201ENST00000558282 MUC22E2RYF6 1773 aaPredicted RBP8.57□□□□□ -1.04
CSPG4P12-201ENST00000558282 DEFB114Q30KQ6 69 aa8.57□□□□□ -1.04
CSPG4P12-201ENST00000558282 A0A087WZ39 114 aa8.56□□□□□ -1.04
CSPG4P12-201ENST00000558282 C1orf137Q5JT78 98 aa8.56□□□□□ -1.04
CSPG4P12-201ENST00000558282 FBXL19-AS1Q494R0 122 aa8.55□□□□□ -1.04
CSPG4P12-201ENST00000558282 ZNF843Q8N446 348 aa8.55□□□□□ -1.04
CSPG4P12-201ENST00000558282 VCANP13611 3396 aa8.55□□□□□ -1.04
CSPG4P12-201ENST00000558282 F8WDY8 70 aa8.55□□□□□ -1.04
CSPG4P12-201ENST00000558282 SORL1Q92673 2214 aa8.55□□□□□ -1.04
CSPG4P12-201ENST00000558282 GRNP28799 593 aaKnown RBP8.55□□□□□ -1.04
CSPG4P12-201ENST00000558282 DAZAP2Q15038 168 aaPredicted RBP8.54□□□□□ -1.04
CSPG4P12-201ENST00000558282 BEAN1Q3B7T3 259 aa8.54□□□□□ -1.04
CSPG4P12-201ENST00000558282 A0A096LNI7 61 aa8.54□□□□□ -1.04
CSPG4P12-201ENST00000558282 CHCHD7Q9BUK0 85 aa8.54□□□□□ -1.04
CSPG4P12-201ENST00000558282 ADAMTS9Q9P2N4 1935 aa8.54□□□□□ -1.04
CSPG4P12-201ENST00000558282 LINC00575Q6W349 94 aa8.53□□□□□ -1.04
CSPG4P12-201ENST00000558282 ZNF706Q9Y5V0 76 aaPredicted RBP8.53□□□□□ -1.04
CSPG4P12-201ENST00000558282 IGKV2-24A0A0C4DH68 120 aa8.53□□□□□ -1.04
CSPG4P12-201ENST00000558282 C10orf142B7Z368 130 aa8.53□□□□□ -1.04
CSPG4P12-201ENST00000558282 IGKV2-28A0A075B6P5 120 aa8.53□□□□□ -1.04
CSPG4P12-201ENST00000558282 H0Y9P7 68 aa8.53□□□□□ -1.04
CSPG4P12-201ENST00000558282 IGKV2D-28P01615 120 aa8.53□□□□□ -1.04
CSPG4P12-201ENST00000558282 NCOR2Q9Y618 2525 aa8.52□□□□□ -1.05
CSPG4P12-201ENST00000558282 C2orf16Q68DN1 1984 aa8.52□□□□□ -1.05
CSPG4P12-201ENST00000558282 C10orf25Q5T742 122 aa8.51□□□□□ -1.05
CSPG4P12-201ENST00000558282 HCG22E2RYF7 251 aa8.51□□□□□ -1.05
CSPG4P12-201ENST00000558282 EGFEM1PQ0D2K5 195 aa8.51□□□□□ -1.05
CSPG4P12-201ENST00000558282 PRRC2CQ9Y520 2896 aaKnown RBP8.5□□□□□ -1.05
CSPG4P12-201ENST00000558282 DEFB4AO15263 64 aa8.5□□□□□ -1.05
CSPG4P12-201ENST00000558282 CD164Q04900 197 aa8.5□□□□□ -1.05
CSPG4P12-201ENST00000558282 LMO4P61968 165 aa8.5□□□□□ -1.05
CSPG4P12-201ENST00000558282 LELP1Q5T871 98 aa8.5□□□□□ -1.05
CSPG4P12-201ENST00000558282 KIAA1549Q9HCM3 1950 aa8.5□□□□□ -1.05
CSPG4P12-201ENST00000558282 LINC01561Q8N1V8 128 aa8.5□□□□□ -1.05
CSPG4P12-201ENST00000558282 TANC2Q9HCD6 1990 aa8.5□□□□□ -1.05
CSPG4P12-201ENST00000558282 CYSRT1A8MQ03 144 aa8.49□□□□□ -1.05
CSPG4P12-201ENST00000558282 COX6A2Q02221 97 aa8.49□□□□□ -1.05
CSPG4P12-201ENST00000558282 A0A1B0GW54 56 aa8.49□□□□□ -1.05
CSPG4P12-201ENST00000558282 TECTAO75443 2155 aa8.49□□□□□ -1.05
CSPG4P12-201ENST00000558282 SETD2Q9BYW2 2564 aaPredicted RBP8.49□□□□□ -1.05
CSPG4P12-201ENST00000558282 KIF26AQ9ULI4 1882 aaPredicted RBP8.49□□□□□ -1.05
CSPG4P12-201ENST00000558282 SPTBN4Q9H254 2564 aa8.49□□□□□ -1.05
CSPG4P12-201ENST00000558282 ZNF580Q9UK33 172 aa8.48□□□□□ -1.05
CSPG4P12-201ENST00000558282 TMEM131Q92545 1883 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms