RNA–Protein interactions for RNA: ENST00000557727.1

CHD8-214, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

Gene CHD8, Length 1,146 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-214ENST00000557727 HIST2H2BEQ16778 126 aa5.92□□□□□ -1.46
CHD8-214ENST00000557727 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.92□□□□□ -1.46
CHD8-214ENST00000557727 HIST1H2BHQ93079 126 aa5.92□□□□□ -1.46
CHD8-214ENST00000557727 TOMM6Q96B49 74 aa5.92□□□□□ -1.46
CHD8-214ENST00000557727 HIST1H2BNQ99877 126 aa5.92□□□□□ -1.46
CHD8-214ENST00000557727 HIST1H2BMQ99879 126 aa5.92□□□□□ -1.46
CHD8-214ENST00000557727 C1orf43Q9BWL3 253 aa5.92□□□□□ -1.46
CHD8-214ENST00000557727 TM2D2Q9BX73 214 aa5.92□□□□□ -1.46
CHD8-214ENST00000557727 LECT2O14960 151 aa5.91□□□□□ -1.46
CHD8-214ENST00000557727 LINC00614P0C842 121 aa5.91□□□□□ -1.46
CHD8-214ENST00000557727 G0S2P27469 103 aa5.91□□□□□ -1.46
CHD8-214ENST00000557727 FUSP35637 526 aaKnown RBP eCLIP5.91□□□□□ -1.46
CHD8-214ENST00000557727 FOXI1Q12951 378 aa5.91□□□□□ -1.46
CHD8-214ENST00000557727 BAALCQ8WXS3 180 aa5.91□□□□□ -1.46
CHD8-214ENST00000557727 CHCHD10Q8WYQ3 142 aaPredicted RBP5.91□□□□□ -1.46
CHD8-214ENST00000557727 CHCHD1Q96BP2 118 aaKnown RBP5.91□□□□□ -1.46
CHD8-214ENST00000557727 RMI2Q96E14 147 aa5.91□□□□□ -1.46
CHD8-214ENST00000557727 TMEM101Q96IK0 257 aa5.91□□□□□ -1.46
CHD8-214ENST00000557727 AMELXQ99217 191 aa5.91□□□□□ -1.46
CHD8-214ENST00000557727 CYSLTR1Q9Y271 337 aa5.91□□□□□ -1.46
CHD8-214ENST00000557727 COX11Q9Y6N1 276 aa5.91□□□□□ -1.46
CHD8-214ENST00000557727 IGKV3OR2-268A0A0C4DH90 116 aa5.9□□□□□ -1.46
CHD8-214ENST00000557727 PSCAO43653 123 aa5.9□□□□□ -1.46
CHD8-214ENST00000557727 HSBP1O75506 76 aa5.9□□□□□ -1.46
CHD8-214ENST00000557727 SERF1AO75920 110 aa5.9□□□□□ -1.46
CHD8-214ENST00000557727 NPSP0C0P6 89 aa5.9□□□□□ -1.46
CHD8-214ENST00000557727 ZC2HC1BQ5TFG8 222 aa5.9□□□□□ -1.46
CHD8-214ENST00000557727 SPATA12Q7Z6I5 190 aa5.9□□□□□ -1.46
CHD8-214ENST00000557727 Q8N814 137 aa5.9□□□□□ -1.46
CHD8-214ENST00000557727 NTN5Q8WTR8 489 aaPredicted RBP5.9□□□□□ -1.46
CHD8-214ENST00000557727 GAGE12HA6NDE8 117 aa5.89□□□□□ -1.47
CHD8-214ENST00000557727 LINC01549A6NIU2 74 aa5.89□□□□□ -1.47
CHD8-214ENST00000557727 USP17L23D6RBM5 183 aa5.89□□□□□ -1.47
CHD8-214ENST00000557727 CCL25O15444 150 aa5.89□□□□□ -1.47
CHD8-214ENST00000557727 HBDP02042 147 aa5.89□□□□□ -1.47
CHD8-214ENST00000557727 SLPIP03973 132 aa5.89□□□□□ -1.47
CHD8-214ENST00000557727 PMCHL1Q16048 86 aa5.89□□□□□ -1.47
CHD8-214ENST00000557727 PDZD11Q5EBL8 140 aa5.89□□□□□ -1.47
CHD8-214ENST00000557727 DGAT2L7PQ6IED9 249 aa5.89□□□□□ -1.47
CHD8-214ENST00000557727 C15orf56Q8N910 161 aa5.89□□□□□ -1.47
CHD8-214ENST00000557727 TIMM17AQ99595 171 aa5.89□□□□□ -1.47
CHD8-214ENST00000557727 KIAA1109Q2LD37 5005 aa5.89□□□□□ -1.47
CHD8-214ENST00000557727 NUPR1O60356 82 aa5.88□□□□□ -1.47
CHD8-214ENST00000557727 ERASQ7Z444 233 aa5.88□□□□□ -1.47
CHD8-214ENST00000557727 TMEM141Q96I45 108 aa5.88□□□□□ -1.47
CHD8-214ENST00000557727 TRAV13-1A0A0B4J241 112 aa5.87□□□□□ -1.47
CHD8-214ENST00000557727 IGHV3OR16-9A0A0B4J2B5 98 aa5.87□□□□□ -1.47
CHD8-214ENST00000557727 PRSS1P07477 247 aa5.87□□□□□ -1.47
CHD8-214ENST00000557727 XCL1P47992 114 aa5.87□□□□□ -1.47
CHD8-214ENST00000557727 UBE2D1P51668 147 aa5.87□□□□□ -1.47
CHD8-214ENST00000557727 NDUFA6P56556 154 aa5.87□□□□□ -1.47
CHD8-214ENST00000557727 LINC00242Q5T6M2 205 aa5.87□□□□□ -1.47
CHD8-214ENST00000557727 CD164L2Q6UWJ8 174 aa5.87□□□□□ -1.47
CHD8-214ENST00000557727 FAM19A3Q7Z5A8 133 aa5.87□□□□□ -1.47
CHD8-214ENST00000557727 APOBP04114 4563 aaKnown RBP5.86□□□□□ -1.47
CHD8-214ENST00000557727 DNAH8Q96JB1 4490 aa5.86□□□□□ -1.47
CHD8-214ENST00000557727 IFITM10A6NMD0 228 aa5.86□□□□□ -1.47
CHD8-214ENST00000557727 S100A6P06703 90 aa5.86□□□□□ -1.47
CHD8-214ENST00000557727 COX6A2Q02221 97 aa5.86□□□□□ -1.47
CHD8-214ENST00000557727 SS18Q15532 418 aa5.86□□□□□ -1.47
CHD8-214ENST00000557727 COA6Q5JTJ3 125 aaKnown RBP5.86□□□□□ -1.47
CHD8-214ENST00000557727 FAM19A2Q8N3H0 131 aa5.86□□□□□ -1.47
CHD8-214ENST00000557727 SCGB3A1Q96QR1 104 aa5.86□□□□□ -1.47
CHD8-214ENST00000557727 GVQW2A0A096LPI5 108 aaPredicted RBP5.85□□□□□ -1.47
CHD8-214ENST00000557727 KRTAP10-1P60331 282 aa5.85□□□□□ -1.47
CHD8-214ENST00000557727 PAPPA-AS1Q5QFB9 102 aa5.85□□□□□ -1.47
CHD8-214ENST00000557727 Q6ZN92 141 aa5.85□□□□□ -1.47
CHD8-214ENST00000557727 TEX43Q6ZNM6 134 aa5.85□□□□□ -1.47
CHD8-214ENST00000557727 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.84□□□□□ -1.47
CHD8-214ENST00000557727 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.84□□□□□ -1.47
CHD8-214ENST00000557727 ATP5LO75964 103 aa5.84□□□□□ -1.47
CHD8-214ENST00000557727 LEPROTL1O95214 131 aa5.84□□□□□ -1.47
CHD8-214ENST00000557727 VCX2Q9H322 139 aa5.84□□□□□ -1.47
CHD8-214ENST00000557727 CST9LQ9H4G1 147 aa5.84□□□□□ -1.47
CHD8-214ENST00000557727 RYR1P21817 5038 aa5.84□□□□□ -1.48
CHD8-214ENST00000557727 IGLV5-45A0A087WSX0 123 aa5.83□□□□□ -1.48
CHD8-214ENST00000557727 C16orf90A8MZG2 172 aa5.83□□□□□ -1.48
CHD8-214ENST00000557727 CNBPP62633 177 aaKnown RBP5.83□□□□□ -1.48
CHD8-214ENST00000557727 LINC01620Q4KN68 170 aa5.83□□□□□ -1.48
CHD8-214ENST00000557727 C5orf38Q86SI9 138 aa5.83□□□□□ -1.48
CHD8-214ENST00000557727 C2orf88Q9BSF0 95 aa5.83□□□□□ -1.48
CHD8-214ENST00000557727 HSPB8Q9UJY1 196 aa5.83□□□□□ -1.48
CHD8-214ENST00000557727 IGLV4-69A0A075B6H9 119 aa5.82□□□□□ -1.48
CHD8-214ENST00000557727 A0A087WZ39 114 aa5.82□□□□□ -1.48
CHD8-214ENST00000557727 IGLV5-52A0A0A0MRZ9 124 aa5.82□□□□□ -1.48
CHD8-214ENST00000557727 IGHV1-58A0A0C4DH39 117 aa5.82□□□□□ -1.48
CHD8-214ENST00000557727 A0A0J9YXV3 536 aa5.82□□□□□ -1.48
CHD8-214ENST00000557727 hDV102S1A0JD36 115 aa5.82□□□□□ -1.48
CHD8-214ENST00000557727 COX7A2LO14548 114 aa5.82□□□□□ -1.48
CHD8-214ENST00000557727 FABP4P15090 132 aa5.82□□□□□ -1.48
CHD8-214ENST00000557727 PMVKQ15126 192 aa5.82□□□□□ -1.48
CHD8-214ENST00000557727 HIGD2BQ4VC39 106 aa5.82□□□□□ -1.48
CHD8-214ENST00000557727 C14orf177Q52M58 125 aa5.82□□□□□ -1.48
CHD8-214ENST00000557727 IFI27L1Q96BM0 104 aa5.82□□□□□ -1.48
CHD8-214ENST00000557727 LINC00526Q96FQ7 95 aa5.82□□□□□ -1.48
CHD8-214ENST00000557727 PACRGQ96M98 296 aaPredicted RBP5.82□□□□□ -1.48
CHD8-214ENST00000557727 TMA7Q9Y2S6 64 aaKnown RBP5.82□□□□□ -1.48
CHD8-214ENST00000557727 HSPG2P98160 4391 aa5.81□□□□□ -1.48
CHD8-214ENST00000557727 IGHV3-64A0A075B6Q5 118 aa5.81□□□□□ -1.48
CHD8-214ENST00000557727 IGLC3P0DOY3 106 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms