RNA–Protein interactions for RNA: ENST00000557703.5

SHMT2-234, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-234ENST00000557703 DNAH11Q96DT5 4516 aa8.94□□□□□ -0.98
SHMT2-234ENST00000557703 hDV102S1A0JD36 115 aa8.94□□□□□ -0.98
SHMT2-234ENST00000557703 LINC00242Q5T6M2 205 aa8.94□□□□□ -0.98
SHMT2-234ENST00000557703 C15orf56Q8N910 161 aa8.94□□□□□ -0.98
SHMT2-234ENST00000557703 OR10D4PQ8NGN7 298 aa8.94□□□□□ -0.98
SHMT2-234ENST00000557703 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.93□□□□□ -0.98
SHMT2-234ENST00000557703 A0A087WZ39 114 aa8.93□□□□□ -0.98
SHMT2-234ENST00000557703 ZNF561-AS1K7EIQ3 104 aa8.93□□□□□ -0.98
SHMT2-234ENST00000557703 PMVKQ15126 192 aa8.93□□□□□ -0.98
SHMT2-234ENST00000557703 PDZD11Q5EBL8 140 aa8.93□□□□□ -0.98
SHMT2-234ENST00000557703 LINC00173Q6ZV60 143 aa8.93□□□□□ -0.98
SHMT2-234ENST00000557703 C9orf163Q8N9P6 203 aa8.93□□□□□ -0.98
SHMT2-234ENST00000557703 A0A096LNJ9 63 aa8.92□□□□□ -0.98
SHMT2-234ENST00000557703 ATP6V1G1O75348 118 aa8.92□□□□□ -0.98
SHMT2-234ENST00000557703 HSBP1O75506 76 aa8.92□□□□□ -0.98
SHMT2-234ENST00000557703 TINCRA0A1B0GVN0 87 aa8.91□□□□□ -0.98
SHMT2-234ENST00000557703 SCO1O75880 301 aa8.91□□□□□ -0.98
SHMT2-234ENST00000557703 C2orf48Q96LS8 159 aa8.91□□□□□ -0.98
SHMT2-234ENST00000557703 CST9LQ9H4G1 147 aa8.91□□□□□ -0.98
SHMT2-234ENST00000557703 GEMIN7Q9H840 131 aaKnown RBP8.91□□□□□ -0.98
SHMT2-234ENST00000557703 IGHV3-64A0A075B6Q5 118 aa8.9□□□□□ -0.98
SHMT2-234ENST00000557703 C5orf38Q86SI9 138 aa8.89□□□□□ -0.99
SHMT2-234ENST00000557703 IGLV5-45A0A087WSX0 123 aa8.88□□□□□ -0.99
SHMT2-234ENST00000557703 KRTAP10-1P60331 282 aa8.88□□□□□ -0.99
SHMT2-234ENST00000557703 RNF151Q2KHN1 245 aa8.88□□□□□ -0.99
SHMT2-234ENST00000557703 Q6ZSA8 131 aa8.88□□□□□ -0.99
SHMT2-234ENST00000557703 PACRGQ96M98 296 aaPredicted RBP8.88□□□□□ -0.99
SHMT2-234ENST00000557703 TRAV12-1A0A0B4J245 112 aa8.87□□□□□ -0.99
SHMT2-234ENST00000557703 HIST1H2BKO60814 126 aa8.87□□□□□ -0.99
SHMT2-234ENST00000557703 HIST1H2BJP06899 126 aa8.87□□□□□ -0.99
SHMT2-234ENST00000557703 HIST1H2BOP23527 126 aa8.87□□□□□ -0.99
SHMT2-234ENST00000557703 HIST1H2BBP33778 126 aa8.87□□□□□ -0.99
SHMT2-234ENST00000557703 HIST1H2BDP58876 126 aa8.87□□□□□ -0.99
SHMT2-234ENST00000557703 HIST1H2BCP62807 126 aa8.87□□□□□ -0.99
SHMT2-234ENST00000557703 HIST2H2BEQ16778 126 aa8.87□□□□□ -0.99
SHMT2-234ENST00000557703 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.87□□□□□ -0.99
SHMT2-234ENST00000557703 HIST1H2BHQ93079 126 aa8.87□□□□□ -0.99
SHMT2-234ENST00000557703 IFI27L1Q96BM0 104 aa8.87□□□□□ -0.99
SHMT2-234ENST00000557703 HIST1H2BNQ99877 126 aa8.87□□□□□ -0.99
SHMT2-234ENST00000557703 HIST1H2BMQ99879 126 aa8.87□□□□□ -0.99
SHMT2-234ENST00000557703 HSPB8Q9UJY1 196 aa8.87□□□□□ -0.99
SHMT2-234ENST00000557703 IGLV4-69A0A075B6H9 119 aa8.86□□□□□ -0.99
SHMT2-234ENST00000557703 H3BRM9 83 aa8.86□□□□□ -0.99
SHMT2-234ENST00000557703 SERF1AO75920 110 aa8.86□□□□□ -0.99
SHMT2-234ENST00000557703 COX6A2Q02221 97 aa8.86□□□□□ -0.99
SHMT2-234ENST00000557703 SYCNQ0VAF6 134 aa8.86□□□□□ -0.99
SHMT2-234ENST00000557703 HIGD2BQ4VC39 106 aa8.86□□□□□ -0.99
SHMT2-234ENST00000557703 LINC00474Q9P2X8 69 aa8.86□□□□□ -0.99
SHMT2-234ENST00000557703 LRP1BQ9NZR2 4599 aa8.85□□□□□ -0.99
SHMT2-234ENST00000557703 LEPROTL1O95214 131 aa8.85□□□□□ -0.99
SHMT2-234ENST00000557703 SLPIP03973 132 aa8.85□□□□□ -0.99
SHMT2-234ENST00000557703 IGLC3P0DOY3 106 aa8.85□□□□□ -0.99
SHMT2-234ENST00000557703 SPAG11BQ08648 103 aa8.85□□□□□ -0.99
SHMT2-234ENST00000557703 PMCHL1Q16048 86 aa8.85□□□□□ -0.99
SHMT2-234ENST00000557703 COA6Q5JTJ3 125 aaKnown RBP8.85□□□□□ -0.99
SHMT2-234ENST00000557703 SDIM1Q6ZPB5 146 aa8.85□□□□□ -0.99
SHMT2-234ENST00000557703 ORAOV1Q8WV07 137 aa8.85□□□□□ -0.99
SHMT2-234ENST00000557703 CARD19Q96LW7 228 aa8.85□□□□□ -0.99
SHMT2-234ENST00000557703 DNAH5Q8TE73 4624 aa8.84□□□□□ -0.99
SHMT2-234ENST00000557703 A0A0J9YXV3 536 aa8.84□□□□□ -0.99
SHMT2-234ENST00000557703 ZC2HC1BQ5TFG8 222 aa8.84□□□□□ -0.99
SHMT2-234ENST00000557703 Q8IZM0 81 aa8.84□□□□□ -0.99
SHMT2-234ENST00000557703 LINC00469Q8N7U9 141 aa8.84□□□□□ -0.99
SHMT2-234ENST00000557703 CAMK2N2Q96S95 79 aa8.84□□□□□ -0.99
SHMT2-234ENST00000557703 MRPL35Q9NZE8 188 aaKnown RBP8.84□□□□□ -0.99
SHMT2-234ENST00000557703 CDKN2A-AS1Q9UH64 79 aa8.84□□□□□ -0.99
SHMT2-234ENST00000557703 DYNC1H1Q14204 4646 aaKnown RBP8.84□□□□□ -0.99
SHMT2-234ENST00000557703 NDUFA1O15239 70 aa8.83□□□□□ -1
SHMT2-234ENST00000557703 PRSS2P07478 247 aa8.83□□□□□ -1
SHMT2-234ENST00000557703 FUSP35637 526 aaKnown RBP eCLIP8.83□□□□□ -1
SHMT2-234ENST00000557703 CXCL5P42830 114 aa8.83□□□□□ -1
SHMT2-234ENST00000557703 NDUFA6P56556 154 aa8.83□□□□□ -1
SHMT2-234ENST00000557703 LINC00310P59036 64 aa8.83□□□□□ -1
SHMT2-234ENST00000557703 FAM19A2Q8N3H0 131 aa8.83□□□□□ -1
SHMT2-234ENST00000557703 TRBV30A0A0K0K1B3 111 aa8.82□□□□□ -1
SHMT2-234ENST00000557703 CIRBPQ14011 172 aaKnown RBP8.82□□□□□ -1
SHMT2-234ENST00000557703 CHAC1Q9BUX1 264 aa8.82□□□□□ -1
SHMT2-234ENST00000557703 KIAA0087Q14695 138 aa8.81□□□□□ -1
SHMT2-234ENST00000557703 C6orf226Q5I0X4 101 aa8.81□□□□□ -1
SHMT2-234ENST00000557703 SFTA2Q6UW10 78 aa8.81□□□□□ -1
SHMT2-234ENST00000557703 CHTOPQ9Y3Y2 248 aaKnown RBP8.81□□□□□ -1
SHMT2-234ENST00000557703 F8VRH5 84 aa8.8□□□□□ -1
SHMT2-234ENST00000557703 XGP55808 180 aa8.8□□□□□ -1
SHMT2-234ENST00000557703 LOC107984640A0A0U1RRK4 108 aa8.79□□□□□ -1
SHMT2-234ENST00000557703 SMIM1B2RUZ4 78 aa8.79□□□□□ -1
SHMT2-234ENST00000557703 TLX1NBP0CAT3 122 aa8.79□□□□□ -1
SHMT2-234ENST00000557703 CKS1BP61024 79 aa8.79□□□□□ -1
SHMT2-234ENST00000557703 NUPR1O60356 82 aa8.78□□□□□ -1
SHMT2-234ENST00000557703 Q6ZRU5 148 aa8.78□□□□□ -1
SHMT2-234ENST00000557703 MAP1LC3CQ9BXW4 147 aa8.78□□□□□ -1
SHMT2-234ENST00000557703 FAM30AQ9NZY2 134 aa8.78□□□□□ -1
SHMT2-234ENST00000557703 IGLV5-39A0A0G2JS06 123 aa8.77□□□□□ -1.01
SHMT2-234ENST00000557703 ZNF22P17026 224 aaPredicted RBP8.77□□□□□ -1.01
SHMT2-234ENST00000557703 PLNP26678 52 aa8.77□□□□□ -1.01
SHMT2-234ENST00000557703 LINC01620Q4KN68 170 aa8.77□□□□□ -1.01
SHMT2-234ENST00000557703 LINC00526Q96FQ7 95 aa8.77□□□□□ -1.01
SHMT2-234ENST00000557703 ODF1Q14990 250 aa8.76□□□□□ -1.01
SHMT2-234ENST00000557703 COX7B2Q8TF08 81 aa8.76□□□□□ -1.01
SHMT2-234ENST00000557703 TOMM7Q9P0U1 55 aa8.76□□□□□ -1.01
SHMT2-234ENST00000557703 C11orf86A6NJI1 115 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 112 ms