RNA–Protein interactions for RNA: ENST00000557511.5

PSEN1-223, Transcript of presenilin 1, humanhuman

TSL 5 BASIC

Gene PSEN1, Length 1,230 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-223ENST00000557511 C2orf88Q9BSF0 95 aa5.45□□□□□ -1.54
PSEN1-223ENST00000557511 SMCO4Q9NRQ5 59 aa5.45□□□□□ -1.54
PSEN1-223ENST00000557511 PKIGQ9Y2B9 76 aa5.45□□□□□ -1.54
PSEN1-223ENST00000557511 DNAH5Q8TE73 4624 aa5.44□□□□□ -1.54
PSEN1-223ENST00000557511 LINC01549A6NIU2 74 aa5.44□□□□□ -1.54
PSEN1-223ENST00000557511 IFITM10A6NMD0 228 aa5.44□□□□□ -1.54
PSEN1-223ENST00000557511 COX7A2LO14548 114 aa5.44□□□□□ -1.54
PSEN1-223ENST00000557511 RPL39P62891 51 aaKnown RBP5.44□□□□□ -1.54
PSEN1-223ENST00000557511 MRPS36P82909 103 aaKnown RBP5.44□□□□□ -1.54
PSEN1-223ENST00000557511 RNASE13Q5GAN3 156 aaKnown RBP5.44□□□□□ -1.54
PSEN1-223ENST00000557511 KRTAP26-1Q6PEX3 210 aa5.44□□□□□ -1.54
PSEN1-223ENST00000557511 C2orf66Q6UXQ4 117 aa5.44□□□□□ -1.54
PSEN1-223ENST00000557511 Q6ZUT4 128 aa5.44□□□□□ -1.54
PSEN1-223ENST00000557511 FA2HQ7L5A8 372 aa5.44□□□□□ -1.54
PSEN1-223ENST00000557511 DPH3Q96FX2 82 aa5.44□□□□□ -1.54
PSEN1-223ENST00000557511 TRAPPC1Q9Y5R8 145 aa5.44□□□□□ -1.54
PSEN1-223ENST00000557511 IGHV3-64A0A075B6Q5 118 aa5.43□□□□□ -1.54
PSEN1-223ENST00000557511 FOXI1Q12951 378 aa5.43□□□□□ -1.54
PSEN1-223ENST00000557511 HIGD2BQ4VC39 106 aa5.43□□□□□ -1.54
PSEN1-223ENST00000557511 TEX43Q6ZNM6 134 aa5.43□□□□□ -1.54
PSEN1-223ENST00000557511 SLC7A5P1Q8MH63 180 aa5.43□□□□□ -1.54
PSEN1-223ENST00000557511 C9orf163Q8N9P6 203 aa5.43□□□□□ -1.54
PSEN1-223ENST00000557511 TMEM141Q96I45 108 aa5.43□□□□□ -1.54
PSEN1-223ENST00000557511 KRTAP4-11Q9BYQ6 195 aa5.43□□□□□ -1.54
PSEN1-223ENST00000557511 VCX2Q9H322 139 aa5.43□□□□□ -1.54
PSEN1-223ENST00000557511 PYGO1Q9Y3Y4 419 aa5.43□□□□□ -1.54
PSEN1-223ENST00000557511 LRP1BQ9NZR2 4599 aa5.43□□□□□ -1.54
PSEN1-223ENST00000557511 TGIF2-C20orf24A0A0A6YYL0 155 aa5.42□□□□□ -1.54
PSEN1-223ENST00000557511 EPM2AB3EWF7 344 aa5.42□□□□□ -1.54
PSEN1-223ENST00000557511 NPSP0C0P6 89 aa5.42□□□□□ -1.54
PSEN1-223ENST00000557511 CNBPP62633 177 aaKnown RBP5.42□□□□□ -1.54
PSEN1-223ENST00000557511 LINC01620Q4KN68 170 aa5.42□□□□□ -1.54
PSEN1-223ENST00000557511 Q8N1X5 172 aa5.42□□□□□ -1.54
PSEN1-223ENST00000557511 PKHD1P08F94 4074 aa5.42□□□□□ -1.54
PSEN1-223ENST00000557511 GVQW2A0A096LPI5 108 aaPredicted RBP5.41□□□□□ -1.54
PSEN1-223ENST00000557511 XGP55808 180 aa5.41□□□□□ -1.54
PSEN1-223ENST00000557511 RAB5BP61020 215 aa5.41□□□□□ -1.54
PSEN1-223ENST00000557511 SEC11AP67812 179 aa5.41□□□□□ -1.54
PSEN1-223ENST00000557511 C15orf56Q8N910 161 aa5.41□□□□□ -1.54
PSEN1-223ENST00000557511 ALKBH7Q9BT30 221 aaPredicted RBP5.41□□□□□ -1.54
PSEN1-223ENST00000557511 IGLV4-3A0A075B6K6 122 aa5.4□□□□□ -1.54
PSEN1-223ENST00000557511 C5orf38Q86SI9 138 aa5.4□□□□□ -1.54
PSEN1-223ENST00000557511 SCGB3A1Q96QR1 104 aa5.4□□□□□ -1.54
PSEN1-223ENST00000557511 KRTAP4-2Q9BYR5 136 aa5.4□□□□□ -1.54
PSEN1-223ENST00000557511 SMR3BP02814 79 aaPredicted RBP5.39□□□□□ -1.55
PSEN1-223ENST00000557511 HAMPP81172 84 aa5.39□□□□□ -1.55
PSEN1-223ENST00000557511 SYCNQ0VAF6 134 aa5.39□□□□□ -1.55
PSEN1-223ENST00000557511 ERASQ7Z444 233 aa5.39□□□□□ -1.55
PSEN1-223ENST00000557511 OR10D4PQ8NGN7 298 aa5.39□□□□□ -1.55
PSEN1-223ENST00000557511 TOMM6Q96B49 74 aa5.39□□□□□ -1.55
PSEN1-223ENST00000557511 CARD19Q96LW7 228 aa5.39□□□□□ -1.55
PSEN1-223ENST00000557511 CAMK2N2Q96S95 79 aa5.39□□□□□ -1.55
PSEN1-223ENST00000557511 TIMM17AQ99595 171 aa5.39□□□□□ -1.55
PSEN1-223ENST00000557511 OPRPNQ99935 248 aaPredicted RBP5.39□□□□□ -1.55
PSEN1-223ENST00000557511 CHAC1Q9BUX1 264 aa5.39□□□□□ -1.55
PSEN1-223ENST00000557511 FAM30AQ9NZY2 134 aa5.39□□□□□ -1.55
PSEN1-223ENST00000557511 KRTAP23-1A1A580 65 aa5.38□□□□□ -1.55
PSEN1-223ENST00000557511 SPAG11BQ08648 103 aa5.38□□□□□ -1.55
PSEN1-223ENST00000557511 Q6ZSA8 131 aa5.38□□□□□ -1.55
PSEN1-223ENST00000557511 ORAOV1Q8WV07 137 aa5.38□□□□□ -1.55
PSEN1-223ENST00000557511 C2orf48Q96LS8 159 aa5.38□□□□□ -1.55
PSEN1-223ENST00000557511 PACRGQ96M98 296 aaPredicted RBP5.38□□□□□ -1.55
PSEN1-223ENST00000557511 GEMIN7Q9H840 131 aaKnown RBP5.38□□□□□ -1.55
PSEN1-223ENST00000557511 LINC00474Q9P2X8 69 aa5.38□□□□□ -1.55
PSEN1-223ENST00000557511 IGLV4-69A0A075B6H9 119 aa5.37□□□□□ -1.55
PSEN1-223ENST00000557511 F8WDY8 70 aa5.37□□□□□ -1.55
PSEN1-223ENST00000557511 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.37□□□□□ -1.55
PSEN1-223ENST00000557511 PRSS2P07478 247 aa5.37□□□□□ -1.55
PSEN1-223ENST00000557511 LINC00614P0C842 121 aa5.37□□□□□ -1.55
PSEN1-223ENST00000557511 HERVK_113P63121 156 aa5.37□□□□□ -1.55
PSEN1-223ENST00000557511 Q5VSD8 79 aa5.37□□□□□ -1.55
PSEN1-223ENST00000557511 SDIM1Q6ZPB5 146 aa5.37□□□□□ -1.55
PSEN1-223ENST00000557511 SCXQ7RTU7 201 aa5.37□□□□□ -1.55
PSEN1-223ENST00000557511 APOBP04114 4563 aaKnown RBP5.36□□□□□ -1.55
PSEN1-223ENST00000557511 IGHV3OR16-9A0A0B4J2B5 98 aa5.36□□□□□ -1.55
PSEN1-223ENST00000557511 IGKV2-24A0A0C4DH68 120 aa5.36□□□□□ -1.55
PSEN1-223ENST00000557511 IGIPA6NJ69 53 aa5.36□□□□□ -1.55
PSEN1-223ENST00000557511 NDUFA1O15239 70 aa5.36□□□□□ -1.55
PSEN1-223ENST00000557511 HBDP02042 147 aa5.36□□□□□ -1.55
PSEN1-223ENST00000557511 UBE2D1P51668 147 aa5.36□□□□□ -1.55
PSEN1-223ENST00000557511 COX6A2Q02221 97 aa5.36□□□□□ -1.55
PSEN1-223ENST00000557511 MAJINQ3KP22 176 aa5.36□□□□□ -1.55
PSEN1-223ENST00000557511 LINC00242Q5T6M2 205 aa5.36□□□□□ -1.55
PSEN1-223ENST00000557511 CBLN2Q8IUK8 224 aa5.36□□□□□ -1.55
PSEN1-223ENST00000557511 CIRBP-AS1Q8TBR5 109 aa5.36□□□□□ -1.55
PSEN1-223ENST00000557511 LINC00526Q96FQ7 95 aa5.36□□□□□ -1.55
PSEN1-223ENST00000557511 AMELXQ99217 191 aa5.36□□□□□ -1.55
PSEN1-223ENST00000557511 A0A087WZ39 114 aa5.35□□□□□ -1.55
PSEN1-223ENST00000557511 LOC107984640A0A0U1RRK4 108 aa5.35□□□□□ -1.55
PSEN1-223ENST00000557511 LINC01546A6NGU7 62 aa5.35□□□□□ -1.55
PSEN1-223ENST00000557511 SLPIP03973 132 aa5.35□□□□□ -1.55
PSEN1-223ENST00000557511 NDUFA6P56556 154 aa5.35□□□□□ -1.55
PSEN1-223ENST00000557511 BAGE3Q86Y29 109 aa5.35□□□□□ -1.55
PSEN1-223ENST00000557511 LINC01561Q8N1V8 128 aa5.35□□□□□ -1.55
PSEN1-223ENST00000557511 C18orf32Q8TCD1 76 aa5.35□□□□□ -1.55
PSEN1-223ENST00000557511 C7orf33Q8WU49 177 aa5.35□□□□□ -1.55
PSEN1-223ENST00000557511 ATP5LO75964 103 aa5.34□□□□□ -1.55
PSEN1-223ENST00000557511 INAFM2P0DMQ5 153 aa5.34□□□□□ -1.55
PSEN1-223ENST00000557511 CKS1BP61024 79 aa5.34□□□□□ -1.55
PSEN1-223ENST00000557511 PMVKQ15126 192 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms