RNA–Protein interactions for RNA: ENST00000557498.1

ARHGEF40-208, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 2

Gene ARHGEF40, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-208ENST00000557498 COX8AP10176 69 aa9.78□□□□□ -0.84
ARHGEF40-208ENST00000557498 XCL1P47992 114 aa9.78□□□□□ -0.84
ARHGEF40-208ENST00000557498 CHCHD10Q8WYQ3 142 aaPredicted RBP9.78□□□□□ -0.84
ARHGEF40-208ENST00000557498 UBE2WQ96B02 151 aa9.78□□□□□ -0.84
ARHGEF40-208ENST00000557498 DYNC2H1Q8NCM8 4307 aaKnown RBP9.77□□□□□ -0.85
ARHGEF40-208ENST00000557498 IGHV3-64A0A075B6Q5 118 aa9.77□□□□□ -0.85
ARHGEF40-208ENST00000557498 IGHV3OR16-9A0A0B4J2B5 98 aa9.77□□□□□ -0.85
ARHGEF40-208ENST00000557498 IGHV1-58A0A0C4DH39 117 aa9.77□□□□□ -0.85
ARHGEF40-208ENST00000557498 UQCR10Q9UDW1 63 aa9.77□□□□□ -0.85
ARHGEF40-208ENST00000557498 IGLV10-54A0A075B6I4 117 aa9.76□□□□□ -0.85
ARHGEF40-208ENST00000557498 TRAV8-3A0A0A6YYJ7 113 aa9.76□□□□□ -0.85
ARHGEF40-208ENST00000557498 TRAV8-4A0A0B4J246 113 aa9.76□□□□□ -0.85
ARHGEF40-208ENST00000557498 SMIM1B2RUZ4 78 aa9.76□□□□□ -0.85
ARHGEF40-208ENST00000557498 LEPROTO15243 131 aa9.76□□□□□ -0.85
ARHGEF40-208ENST00000557498 MIAQ16674 131 aa9.76□□□□□ -0.85
ARHGEF40-208ENST00000557498 CD164L2Q6UWJ8 174 aa9.76□□□□□ -0.85
ARHGEF40-208ENST00000557498 PCP2Q8IVA1 136 aa9.76□□□□□ -0.85
ARHGEF40-208ENST00000557498 PLEKHB2Q96CS7 222 aa9.76□□□□□ -0.85
ARHGEF40-208ENST00000557498 COL7A1Q02388 2944 aa9.76□□□□□ -0.85
ARHGEF40-208ENST00000557498 A0A087WZ39 114 aa9.75□□□□□ -0.85
ARHGEF40-208ENST00000557498 TSPEAR-AS2P59090 65 aa9.75□□□□□ -0.85
ARHGEF40-208ENST00000557498 SLC25A34Q6PIV7 304 aa9.75□□□□□ -0.85
ARHGEF40-208ENST00000557498 C5orf38Q86SI9 138 aa9.75□□□□□ -0.85
ARHGEF40-208ENST00000557498 BOD1L2Q8IYS8 172 aa9.75□□□□□ -0.85
ARHGEF40-208ENST00000557498 MIEN1Q9BRT3 115 aa9.75□□□□□ -0.85
ARHGEF40-208ENST00000557498 Q9H8V8 135 aa9.75□□□□□ -0.85
ARHGEF40-208ENST00000557498 TP73-AS1Q9UF72 201 aa9.75□□□□□ -0.85
ARHGEF40-208ENST00000557498 IGLV5-39A0A0G2JS06 123 aa9.74□□□□□ -0.85
ARHGEF40-208ENST00000557498 PCP4L1A6NKN8 68 aa9.74□□□□□ -0.85
ARHGEF40-208ENST00000557498 DLEU1O43261 78 aa9.74□□□□□ -0.85
ARHGEF40-208ENST00000557498 FOXI1Q12951 378 aa9.74□□□□□ -0.85
ARHGEF40-208ENST00000557498 LINC01561Q8N1V8 128 aa9.74□□□□□ -0.85
ARHGEF40-208ENST00000557498 C10orf126Q8N4M7 172 aa9.74□□□□□ -0.85
ARHGEF40-208ENST00000557498 TTTY13Q9BZ97 58 aa9.74□□□□□ -0.85
ARHGEF40-208ENST00000557498 STAB2Q8WWQ8 2551 aa9.73□□□□□ -0.85
ARHGEF40-208ENST00000557498 GAGE12HA6NDE8 117 aa9.73□□□□□ -0.85
ARHGEF40-208ENST00000557498 IBA57-AS1B1ANH7 110 aa9.73□□□□□ -0.85
ARHGEF40-208ENST00000557498 J3QQQ9 107 aa9.73□□□□□ -0.85
ARHGEF40-208ENST00000557498 LGALS3P17931 250 aaKnown RBP9.73□□□□□ -0.85
ARHGEF40-208ENST00000557498 MAPKAPK5-AS1Q8N8E1 139 aa9.73□□□□□ -0.85
ARHGEF40-208ENST00000557498 K7EP13 123 aa9.72□□□□□ -0.85
ARHGEF40-208ENST00000557498 COX7A2LO14548 114 aa9.72□□□□□ -0.85
ARHGEF40-208ENST00000557498 DNAH7Q8WXX0 4024 aa9.71□□□□□ -0.85
ARHGEF40-208ENST00000557498 MYMXA0A1B0GTQ4 84 aa9.71□□□□□ -0.86
ARHGEF40-208ENST00000557498 ZNF815PA8K554 130 aa9.71□□□□□ -0.86
ARHGEF40-208ENST00000557498 DDTP30046 118 aa9.71□□□□□ -0.86
ARHGEF40-208ENST00000557498 KRTAP26-1Q6PEX3 210 aa9.71□□□□□ -0.86
ARHGEF40-208ENST00000557498 C1orf43Q9BWL3 253 aa9.71□□□□□ -0.86
ARHGEF40-208ENST00000557498 HNRNPA3P51991 378 aaKnown RBP9.7□□□□□ -0.86
ARHGEF40-208ENST00000557498 Q9HAA7 133 aa9.7□□□□□ -0.86
ARHGEF40-208ENST00000557498 FBN3Q75N90 2809 aa9.69□□□□□ -0.86
ARHGEF40-208ENST00000557498 C2orf91Q6ZV80 131 aa9.69□□□□□ -0.86
ARHGEF40-208ENST00000557498 IGKV2D-24A0A075B6R9 120 aa9.68□□□□□ -0.86
ARHGEF40-208ENST00000557498 C3orf84H3BNL1 204 aa9.68□□□□□ -0.86
ARHGEF40-208ENST00000557498 MALP21145 153 aa9.68□□□□□ -0.86
ARHGEF40-208ENST00000557498 COX7B2Q8TF08 81 aa9.68□□□□□ -0.86
ARHGEF40-208ENST00000557498 RMI2Q96E14 147 aa9.68□□□□□ -0.86
ARHGEF40-208ENST00000557498 KRTAP1-5Q9BYS1 174 aa9.68□□□□□ -0.86
ARHGEF40-208ENST00000557498 CASC10Q5T4H9 136 aa9.67□□□□□ -0.86
ARHGEF40-208ENST00000557498 ORAOV1Q8WV07 137 aa9.67□□□□□ -0.86
ARHGEF40-208ENST00000557498 NDUFA12Q9UI09 145 aa9.67□□□□□ -0.86
ARHGEF40-208ENST00000557498 NDUFA1O15239 70 aa9.66□□□□□ -0.86
ARHGEF40-208ENST00000557498 APOMO95445 188 aa9.66□□□□□ -0.86
ARHGEF40-208ENST00000557498 TTC32Q5I0X7 151 aa9.66□□□□□ -0.86
ARHGEF40-208ENST00000557498 TOMM7Q9P0U1 55 aa9.66□□□□□ -0.86
ARHGEF40-208ENST00000557498 NBDYA0A0U1RRE5 68 aa9.65□□□□□ -0.86
ARHGEF40-208ENST00000557498 Q8IZM0 81 aa9.65□□□□□ -0.86
ARHGEF40-208ENST00000557498 HIGD1BQ9P298 99 aa9.65□□□□□ -0.86
ARHGEF40-208ENST00000557498 PRSS2P07478 247 aa9.64□□□□□ -0.87
ARHGEF40-208ENST00000557498 SCGB1D4Q6XE38 83 aa9.64□□□□□ -0.87
ARHGEF40-208ENST00000557498 A0A0J9YXY3 114 aa9.63□□□□□ -0.87
ARHGEF40-208ENST00000557498 LINC00587B1AMM8 73 aa9.63□□□□□ -0.87
ARHGEF40-208ENST00000557498 CTAG1AP78358 180 aa9.63□□□□□ -0.87
ARHGEF40-208ENST00000557498 SPAG11BQ08648 103 aa9.63□□□□□ -0.87
ARHGEF40-208ENST00000557498 ZNF625Q96I27 306 aaPredicted RBP9.63□□□□□ -0.87
ARHGEF40-208ENST00000557498 STARD9Q9P2P6 4700 aa9.63□□□□□ -0.87
ARHGEF40-208ENST00000557498 HERV-K104P63124 156 aa9.62□□□□□ -0.87
ARHGEF40-208ENST00000557498 KIAA0087Q14695 138 aa9.62□□□□□ -0.87
ARHGEF40-208ENST00000557498 C6orf226Q5I0X4 101 aa9.62□□□□□ -0.87
ARHGEF40-208ENST00000557498 CFAP161Q6P656 301 aa9.62□□□□□ -0.87
ARHGEF40-208ENST00000557498 COX11Q9Y6N1 276 aa9.62□□□□□ -0.87
ARHGEF40-208ENST00000557498 CXCL5P42830 114 aa9.61□□□□□ -0.87
ARHGEF40-208ENST00000557498 SFTA2Q6UW10 78 aa9.61□□□□□ -0.87
ARHGEF40-208ENST00000557498 C15orf56Q8N910 161 aa9.61□□□□□ -0.87
ARHGEF40-208ENST00000557498 TM2D2Q9BX73 214 aa9.61□□□□□ -0.87
ARHGEF40-208ENST00000557498 HSD52Q0P140 79 aa9.6□□□□□ -0.87
ARHGEF40-208ENST00000557498 LINC00476Q8WZB0 136 aa9.6□□□□□ -0.87
ARHGEF40-208ENST00000557498 CSMD3Q7Z407 3707 aa9.6□□□□□ -0.87
ARHGEF40-208ENST00000557498 PLECQ15149 4684 aaKnown RBP9.59□□□□□ -0.87
ARHGEF40-208ENST00000557498 TIMM17BO60830 172 aa9.59□□□□□ -0.87
ARHGEF40-208ENST00000557498 CKS1BP61024 79 aa9.59□□□□□ -0.87
ARHGEF40-208ENST00000557498 SPANXB1Q9NS25 103 aaPredicted RBP9.59□□□□□ -0.87
ARHGEF40-208ENST00000557498 GVQW2A0A096LPI5 108 aaPredicted RBP9.58□□□□□ -0.88
ARHGEF40-208ENST00000557498 TMEM238C9JI98 176 aa9.58□□□□□ -0.88
ARHGEF40-208ENST00000557498 LY6G6CO95867 125 aa9.58□□□□□ -0.88
ARHGEF40-208ENST00000557498 HIGD2BQ4VC39 106 aa9.58□□□□□ -0.88
ARHGEF40-208ENST00000557498 TAL2Q16559 108 aa9.57□□□□□ -0.88
ARHGEF40-208ENST00000557498 MEIG1Q5JSS6 88 aa9.57□□□□□ -0.88
ARHGEF40-208ENST00000557498 C2orf82Q6UX34 121 aa9.57□□□□□ -0.88
ARHGEF40-208ENST00000557498 C6orf223Q8N319 242 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms