RNA–Protein interactions for RNA: ENST00000557470.5

VPS33B-207, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 5

Gene VPS33B, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-207ENST00000557470 OR10G9Q8NGN4 311 aa3.82□□□□□ -1.8
VPS33B-207ENST00000557470 MBD3L1Q8WWY6 194 aa3.82□□□□□ -1.8
VPS33B-207ENST00000557470 PGLYRP4Q96LB8 373 aa3.82□□□□□ -1.8
VPS33B-207ENST00000557470 SLC25A2Q9BXI2 301 aa3.82□□□□□ -1.8
VPS33B-207ENST00000557470 LSM5Q9Y4Y9 91 aaKnown RBP3.82□□□□□ -1.8
VPS33B-207ENST00000557470 TMEM262E9PQX1 116 aa3.81□□□□□ -1.8
VPS33B-207ENST00000557470 GNRH2O43555 120 aa3.81□□□□□ -1.8
VPS33B-207ENST00000557470 IGLV2-8P01709 118 aa3.81□□□□□ -1.8
VPS33B-207ENST00000557470 PFN1P07737 140 aaKnown RBP3.81□□□□□ -1.8
VPS33B-207ENST00000557470 MT1HL1P0DM35 61 aa3.81□□□□□ -1.8
VPS33B-207ENST00000557470 FABP2P12104 132 aa3.81□□□□□ -1.8
VPS33B-207ENST00000557470 BVES-AS1Q5T3Y7 98 aa3.81□□□□□ -1.8
VPS33B-207ENST00000557470 FAM19A5Q7Z5A7 132 aaPredicted RBP3.81□□□□□ -1.8
VPS33B-207ENST00000557470 MRPL55Q7Z7F7 128 aaKnown RBP3.81□□□□□ -1.8
VPS33B-207ENST00000557470 ATP6V0E2Q8NHE4 81 aa3.81□□□□□ -1.8
VPS33B-207ENST00000557470 FAM167A-AS1Q96KT0 104 aa3.81□□□□□ -1.8
VPS33B-207ENST00000557470 MAP1LC3AQ9H492 121 aa3.81□□□□□ -1.8
VPS33B-207ENST00000557470 TRAV8-3A0A0A6YYJ7 113 aa3.8□□□□□ -1.8
VPS33B-207ENST00000557470 FAM24AA6NFZ4 105 aa3.8□□□□□ -1.8
VPS33B-207ENST00000557470 RPL37AP61513 92 aaKnown RBP3.8□□□□□ -1.8
VPS33B-207ENST00000557470 Q0VG73 95 aa3.8□□□□□ -1.8
VPS33B-207ENST00000557470 RHOHQ15669 191 aa3.8□□□□□ -1.8
VPS33B-207ENST00000557470 Q6Q795 121 aa3.8□□□□□ -1.8
VPS33B-207ENST00000557470 MIR17HGQ75NE6 70 aa3.8□□□□□ -1.8
VPS33B-207ENST00000557470 DAZ4Q86SG3 579 aaKnown RBP3.8□□□□□ -1.8
VPS33B-207ENST00000557470 BORCS7Q96B45 105 aa3.8□□□□□ -1.8
VPS33B-207ENST00000557470 FXYD5Q96DB9 178 aa3.8□□□□□ -1.8
VPS33B-207ENST00000557470 PRADC1Q9BSG0 188 aa3.8□□□□□ -1.8
VPS33B-207ENST00000557470 DAZ3Q9NR90 486 aaKnown RBP3.8□□□□□ -1.8
VPS33B-207ENST00000557470 TRAPPC1Q9Y5R8 145 aa3.8□□□□□ -1.8
VPS33B-207ENST00000557470 PKHD1L1Q86WI1 4243 aa3.79□□□□□ -1.8
VPS33B-207ENST00000557470 IGHV3-73A0A0B4J1V6 119 aa3.79□□□□□ -1.8
VPS33B-207ENST00000557470 TRAV1-1A0A0B4J248 108 aa3.79□□□□□ -1.8
VPS33B-207ENST00000557470 TRBV6-4A0A1B0GX49 114 aa3.79□□□□□ -1.8
VPS33B-207ENST00000557470 RBAKDNA6NC62 111 aa3.79□□□□□ -1.8
VPS33B-207ENST00000557470 IGLV2-11P01706 119 aa3.79□□□□□ -1.8
VPS33B-207ENST00000557470 PFN2P35080 140 aa3.79□□□□□ -1.8
VPS33B-207ENST00000557470 CSN1S1P47710 185 aa3.79□□□□□ -1.8
VPS33B-207ENST00000557470 CFAP126Q5VTH2 177 aa3.79□□□□□ -1.8
VPS33B-207ENST00000557470 RPL7L1Q6DKI1 246 aaKnown RBP3.79□□□□□ -1.8
VPS33B-207ENST00000557470 SLC25A34Q6PIV7 304 aa3.79□□□□□ -1.8
VPS33B-207ENST00000557470 Q6ZVH6 145 aa3.79□□□□□ -1.8
VPS33B-207ENST00000557470 TMEM252Q8N6L7 170 aa3.79□□□□□ -1.8
VPS33B-207ENST00000557470 Q8N976 141 aa3.79□□□□□ -1.8
VPS33B-207ENST00000557470 OR10AG1Q8NH19 301 aa3.79□□□□□ -1.8
VPS33B-207ENST00000557470 HIST1H4GQ99525 98 aa3.79□□□□□ -1.8
VPS33B-207ENST00000557470 PAXXQ9BUH6 204 aa3.79□□□□□ -1.8
VPS33B-207ENST00000557470 NPCDR1Q9BY65 106 aa3.79□□□□□ -1.8
VPS33B-207ENST00000557470 SDF2L1Q9HCN8 221 aa3.79□□□□□ -1.8
VPS33B-207ENST00000557470 GGTLC3B5MD39 225 aa3.78□□□□□ -1.8
VPS33B-207ENST00000557470 LINC00694P0DN24 101 aa3.78□□□□□ -1.8
VPS33B-207ENST00000557470 RPL12P30050 165 aaKnown RBP3.78□□□□□ -1.8
VPS33B-207ENST00000557470 KRTDAPP60985 99 aa3.78□□□□□ -1.8
VPS33B-207ENST00000557470 HBG1P69891 147 aa3.78□□□□□ -1.8
VPS33B-207ENST00000557470 HBG2P69892 147 aa3.78□□□□□ -1.8
VPS33B-207ENST00000557470 C4orf26Q17RF5 130 aa3.78□□□□□ -1.8
VPS33B-207ENST00000557470 ZNF876PQ49A33 203 aa3.78□□□□□ -1.8
VPS33B-207ENST00000557470 MANBALQ9NQG1 85 aa3.78□□□□□ -1.8
VPS33B-207ENST00000557470 PRO0628Q9UI54 55 aa3.78□□□□□ -1.8
VPS33B-207ENST00000557470 LENEPQ9Y5L5 61 aa3.78□□□□□ -1.8
VPS33B-207ENST00000557470 SPCS1Q9Y6A9 102 aa3.78□□□□□ -1.8
VPS33B-207ENST00000557470 IGKV2D-24A0A075B6R9 120 aa3.77□□□□□ -1.81
VPS33B-207ENST00000557470 TRAV21A0A0B4J279 112 aa3.77□□□□□ -1.81
VPS33B-207ENST00000557470 MT-ND6P03923 174 aa3.77□□□□□ -1.81
VPS33B-207ENST00000557470 MGST1P10620 155 aaKnown RBP3.77□□□□□ -1.81
VPS33B-207ENST00000557470 ASIPP42127 132 aa3.77□□□□□ -1.81
VPS33B-207ENST00000557470 UBE2L3P68036 154 aaKnown RBP3.77□□□□□ -1.81
VPS33B-207ENST00000557470 MPV17L2Q567V2 206 aa3.77□□□□□ -1.81
VPS33B-207ENST00000557470 BAGE3Q86Y29 109 aa3.77□□□□□ -1.81
VPS33B-207ENST00000557470 BAGE2Q86Y30 109 aa3.77□□□□□ -1.81
VPS33B-207ENST00000557470 CYB561D1Q8N8Q1 229 aa3.77□□□□□ -1.81
VPS33B-207ENST00000557470 C18orf32Q8TCD1 76 aa3.77□□□□□ -1.81
VPS33B-207ENST00000557470 SCGB1C1Q8TD33 95 aa3.77□□□□□ -1.81
VPS33B-207ENST00000557470 RMI2Q96E14 147 aa3.77□□□□□ -1.81
VPS33B-207ENST00000557470 TRAV8-1A0A0A6YYK1 113 aa3.76□□□□□ -1.81
VPS33B-207ENST00000557470 TRAV8-4A0A0B4J246 113 aa3.76□□□□□ -1.81
VPS33B-207ENST00000557470 A0A1W2PPM0 123 aa3.76□□□□□ -1.81
VPS33B-207ENST00000557470 H7C1H1 209 aa3.76□□□□□ -1.81
VPS33B-207ENST00000557470 P01737 135 aa3.76□□□□□ -1.81
VPS33B-207ENST00000557470 IFITM1P13164 125 aa3.76□□□□□ -1.81
VPS33B-207ENST00000557470 NTF3P20783 257 aa3.76□□□□□ -1.81
VPS33B-207ENST00000557470 NDUFV3P56181 108 aaKnown RBP3.76□□□□□ -1.81
VPS33B-207ENST00000557470 Q6ZUT4 128 aa3.76□□□□□ -1.81
VPS33B-207ENST00000557470 GOLT1AQ6ZVE7 132 aa3.76□□□□□ -1.81
VPS33B-207ENST00000557470 GATD1Q8NB37 220 aa3.76□□□□□ -1.81
VPS33B-207ENST00000557470 OR5C1Q8NGR4 320 aa3.76□□□□□ -1.81
VPS33B-207ENST00000557470 FAM213BQ8TBF2 198 aa3.76□□□□□ -1.81
VPS33B-207ENST00000557470 CHCHD10Q8WYQ3 142 aaPredicted RBP3.76□□□□□ -1.81
VPS33B-207ENST00000557470 PRAC1Q96KF2 57 aa3.76□□□□□ -1.81
VPS33B-207ENST00000557470 KCNS1Q96KK3 526 aa3.76□□□□□ -1.81
VPS33B-207ENST00000557470 KLK12Q9UKR0 248 aa3.76□□□□□ -1.81
VPS33B-207ENST00000557470 MUC21A0A0G2JKD1 596 aa3.75□□□□□ -1.81
VPS33B-207ENST00000557470 MUC21A0A140T8X8 626 aa3.75□□□□□ -1.81
VPS33B-207ENST00000557470 C9JAW5 83 aa3.75□□□□□ -1.81
VPS33B-207ENST00000557470 PANO1I0J062 215 aa3.75□□□□□ -1.81
VPS33B-207ENST00000557470 Q6ZRU5 148 aa3.75□□□□□ -1.81
VPS33B-207ENST00000557470 FAM231DQ6ZW35 169 aa3.75□□□□□ -1.81
VPS33B-207ENST00000557470 TMEM75Q8N9X5 138 aa3.75□□□□□ -1.81
VPS33B-207ENST00000557470 UBE2WQ96B02 151 aa3.75□□□□□ -1.81
VPS33B-207ENST00000557470 LINC00479Q96M42 142 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 88.4 ms