RNA–Protein interactions for RNA: ENST00000557293.5

PSEN1-221, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-221ENST00000557293 VCYO14598 125 aa7.25□□□□□ -1.25
PSEN1-221ENST00000557293 PDE6DO43924 150 aa7.25□□□□□ -1.25
PSEN1-221ENST00000557293 CRYGAP11844 174 aa7.25□□□□□ -1.25
PSEN1-221ENST00000557293 ZNF345Q14585 488 aa7.24□□□□□ -1.25
PSEN1-221ENST00000557293 CTDSP1Q9GZU7 261 aa7.24□□□□□ -1.25
PSEN1-221ENST00000557293 TMEM191AQ9H0A3 160 aa7.24□□□□□ -1.25
PSEN1-221ENST00000557293 SMKR1H3BMG3 65 aa7.23□□□□□ -1.25
PSEN1-221ENST00000557293 LINC00242Q5T6M2 205 aa7.23□□□□□ -1.25
PSEN1-221ENST00000557293 C2orf82Q6UX34 121 aa7.23□□□□□ -1.25
PSEN1-221ENST00000557293 NRACQ8N912 160 aa7.23□□□□□ -1.25
PSEN1-221ENST00000557293 C22orf24Q9Y442 160 aa7.23□□□□□ -1.25
PSEN1-221ENST00000557293 NDUFC2-KCTD14E9PQ53 114 aa7.22□□□□□ -1.25
PSEN1-221ENST00000557293 NUPR1O60356 82 aa7.22□□□□□ -1.25
PSEN1-221ENST00000557293 FCER1GP30273 86 aa7.22□□□□□ -1.25
PSEN1-221ENST00000557293 AMN1Q8IY45 258 aa7.22□□□□□ -1.25
PSEN1-221ENST00000557293 GATCO43716 136 aaKnown RBP7.21□□□□□ -1.26
PSEN1-221ENST00000557293 LINC01547P58512 204 aaPredicted RBP7.21□□□□□ -1.26
PSEN1-221ENST00000557293 TRBV30A0A0K0K1B3 111 aa7.2□□□□□ -1.26
PSEN1-221ENST00000557293 HMSDA8MTL9 139 aa7.2□□□□□ -1.26
PSEN1-221ENST00000557293 A8MWL6 223 aa7.2□□□□□ -1.26
PSEN1-221ENST00000557293 SUMO2P61956 95 aaKnown RBP7.2□□□□□ -1.26
PSEN1-221ENST00000557293 RPL39P62891 51 aaKnown RBP7.2□□□□□ -1.26
PSEN1-221ENST00000557293 SMAGPQ0VAQ4 97 aa7.2□□□□□ -1.26
PSEN1-221ENST00000557293 LINC00173Q6ZV60 143 aa7.2□□□□□ -1.26
PSEN1-221ENST00000557293 FAM231DQ6ZW35 169 aa7.2□□□□□ -1.26
PSEN1-221ENST00000557293 LINC00304Q8N9R0 145 aa7.19□□□□□ -1.26
PSEN1-221ENST00000557293 A0A1B0GUT8 65 aa7.18□□□□□ -1.26
PSEN1-221ENST00000557293 BCE1O60756 84 aa7.18□□□□□ -1.26
PSEN1-221ENST00000557293 RPL28P46779 137 aaKnown RBP7.18□□□□□ -1.26
PSEN1-221ENST00000557293 MRPS36P82909 103 aaKnown RBP7.18□□□□□ -1.26
PSEN1-221ENST00000557293 KIR2DL4Q99706 377 aa7.18□□□□□ -1.26
PSEN1-221ENST00000557293 PPDPFQ9H3Y8 114 aa7.18□□□□□ -1.26
PSEN1-221ENST00000557293 KANTRA0A1W2PQU2 76 aa7.17□□□□□ -1.26
PSEN1-221ENST00000557293 SRSF3P84103 164 aaKnown RBP7.17□□□□□ -1.26
PSEN1-221ENST00000557293 ASB16-AS1Q495Z4 193 aa7.17□□□□□ -1.26
PSEN1-221ENST00000557293 LCE2CQ5TA81 110 aa7.17□□□□□ -1.26
PSEN1-221ENST00000557293 LINC00469Q8N7U9 141 aa7.17□□□□□ -1.26
PSEN1-221ENST00000557293 ZNF727A8MUV8 499 aa7.16□□□□□ -1.26
PSEN1-221ENST00000557293 HIGD1CA8MV81 97 aa7.16□□□□□ -1.26
PSEN1-221ENST00000557293 LBHQ53QV2 105 aaPredicted RBP7.16□□□□□ -1.26
PSEN1-221ENST00000557293 CT83Q5H943 113 aa7.16□□□□□ -1.26
PSEN1-221ENST00000557293 KRTAP13-1Q8IUC0 172 aa7.16□□□□□ -1.26
PSEN1-221ENST00000557293 TMEM18Q96B42 140 aa7.16□□□□□ -1.26
PSEN1-221ENST00000557293 PACRGQ96M98 296 aaPredicted RBP7.16□□□□□ -1.26
PSEN1-221ENST00000557293 IFITM10A6NMD0 228 aa7.15□□□□□ -1.26
PSEN1-221ENST00000557293 CTAG1AP78358 180 aa7.15□□□□□ -1.26
PSEN1-221ENST00000557293 FAM229BQ4G0N7 80 aa7.15□□□□□ -1.26
PSEN1-221ENST00000557293 XAGE1AQ9HD64 81 aa7.15□□□□□ -1.26
PSEN1-221ENST00000557293 SPANXA1Q9NS26 97 aa7.15□□□□□ -1.26
PSEN1-221ENST00000557293 TEX46H3BTG2 121 aa7.14□□□□□ -1.27
PSEN1-221ENST00000557293 PPP1R17O96001 155 aa7.14□□□□□ -1.27
PSEN1-221ENST00000557293 RPL32P62910 135 aaKnown RBP7.14□□□□□ -1.27
PSEN1-221ENST00000557293 MRPL51Q4U2R6 128 aaKnown RBP7.14□□□□□ -1.27
PSEN1-221ENST00000557293 TP73-AS1Q9UF72 201 aa7.14□□□□□ -1.27
PSEN1-221ENST00000557293 TRBV24-1A0A075B6N3 115 aa7.13□□□□□ -1.27
PSEN1-221ENST00000557293 A0A1B0GVG6 124 aa7.13□□□□□ -1.27
PSEN1-221ENST00000557293 HBBP68871 147 aa7.13□□□□□ -1.27
PSEN1-221ENST00000557293 MRPL55Q7Z7F7 128 aaKnown RBP7.13□□□□□ -1.27
PSEN1-221ENST00000557293 BORCS7Q96B45 105 aa7.13□□□□□ -1.27
PSEN1-221ENST00000557293 LINC00167Q96N53 147 aa7.13□□□□□ -1.27
PSEN1-221ENST00000557293 TGIF2-C20orf24A0A0A6YYL0 155 aa7.12□□□□□ -1.27
PSEN1-221ENST00000557293 PPP1R2P9O14990 202 aa7.12□□□□□ -1.27
PSEN1-221ENST00000557293 KRTAP13-3Q3SY46 172 aa7.12□□□□□ -1.27
PSEN1-221ENST00000557293 FAM104BQ5XKR9 115 aa7.12□□□□□ -1.27
PSEN1-221ENST00000557293 C20orf78Q9BR46 151 aa7.12□□□□□ -1.27
PSEN1-221ENST00000557293 RPL37AP8A6NKH3 93 aa7.11□□□□□ -1.27
PSEN1-221ENST00000557293 LINC01561Q8N1V8 128 aa7.11□□□□□ -1.27
PSEN1-221ENST00000557293 TAGLN2P37802 199 aaKnown RBP7.1□□□□□ -1.27
PSEN1-221ENST00000557293 KRTAP19-2Q3LHN2 52 aa7.1□□□□□ -1.27
PSEN1-221ENST00000557293 TMEM250H0YL14 139 aa7.09□□□□□ -1.27
PSEN1-221ENST00000557293 TNFRSF6BO95407 300 aa7.09□□□□□ -1.27
PSEN1-221ENST00000557293 RIGQ13278 110 aa7.09□□□□□ -1.27
PSEN1-221ENST00000557293 C3orf22Q8N5N4 141 aa7.09□□□□□ -1.27
PSEN1-221ENST00000557293 SMIM2Q9BVW6 85 aa7.09□□□□□ -1.27
PSEN1-221ENST00000557293 OSTCQ9NRP0 149 aa7.09□□□□□ -1.27
PSEN1-221ENST00000557293 IGLV4-3A0A075B6K6 122 aa7.08□□□□□ -1.28
PSEN1-221ENST00000557293 IGKV2D-26A0A0A0MRZ7 120 aa7.08□□□□□ -1.28
PSEN1-221ENST00000557293 LINC00862A6NCI5 91 aa7.08□□□□□ -1.28
PSEN1-221ENST00000557293 TCAPO15273 167 aa7.08□□□□□ -1.28
PSEN1-221ENST00000557293 LINC01551Q86U37 167 aa7.08□□□□□ -1.28
PSEN1-221ENST00000557293 PYGO1Q9Y3Y4 419 aa7.08□□□□□ -1.28
PSEN1-221ENST00000557293 V9GYV3 84 aa7.08□□□□□ -1.28
PSEN1-221ENST00000557293 ZC2HC1BQ5TFG8 222 aa7.07□□□□□ -1.28
PSEN1-221ENST00000557293 FP248Q71RG6 208 aaPredicted RBP7.07□□□□□ -1.28
PSEN1-221ENST00000557293 GAGE10A6NGK3 116 aa7.06□□□□□ -1.28
PSEN1-221ENST00000557293 C6orf226Q5I0X4 101 aa7.06□□□□□ -1.28
PSEN1-221ENST00000557293 Q8IZM0 81 aa7.06□□□□□ -1.28
PSEN1-221ENST00000557293 LINC00337Q8N6G1 96 aa7.06□□□□□ -1.28
PSEN1-221ENST00000557293 TOMM7Q9P0U1 55 aa7.06□□□□□ -1.28
PSEN1-221ENST00000557293 NPYP01303 97 aa7.05□□□□□ -1.28
PSEN1-221ENST00000557293 CKS2P33552 79 aa7.05□□□□□ -1.28
PSEN1-221ENST00000557293 CKS1BP61024 79 aa7.05□□□□□ -1.28
PSEN1-221ENST00000557293 MT1HP80294 61 aa7.05□□□□□ -1.28
PSEN1-221ENST00000557293 PNRC1Q12796 327 aaPredicted RBP7.05□□□□□ -1.28
PSEN1-221ENST00000557293 RGS21Q2M5E4 152 aa7.05□□□□□ -1.28
PSEN1-221ENST00000557293 Q6ZN92 141 aa7.05□□□□□ -1.28
PSEN1-221ENST00000557293 IGLV5-37A0A075B6J1 123 aa7.04□□□□□ -1.28
PSEN1-221ENST00000557293 UBE2AP49459 152 aa7.04□□□□□ -1.28
PSEN1-221ENST00000557293 SEC61BP60468 96 aaKnown RBP7.04□□□□□ -1.28
PSEN1-221ENST00000557293 TMEM141Q96I45 108 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms