RNA–Protein interactions for RNA: ENST00000557076.5

SCFD1-223, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 743 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-223ENST00000557076 KRTAP12-2P59991 146 aa2.64□□□□□ -1.99
SCFD1-223ENST00000557076 UBE2BP63146 152 aa2.64□□□□□ -1.99
SCFD1-223ENST00000557076 SS18Q15532 418 aa2.64□□□□□ -1.99
SCFD1-223ENST00000557076 KRTAP13-2Q52LG2 175 aa2.64□□□□□ -1.99
SCFD1-223ENST00000557076 LINC00242Q5T6M2 205 aa2.64□□□□□ -1.99
SCFD1-223ENST00000557076 RNASEKQ6P5S7 137 aaKnown RBP2.64□□□□□ -1.99
SCFD1-223ENST00000557076 MRPL35Q9NZE8 188 aaKnown RBP2.64□□□□□ -1.99
SCFD1-223ENST00000557076 V9GYH0 126 aa2.64□□□□□ -1.99
SCFD1-223ENST00000557076 MUC21A0A140T8X8 626 aa2.63□□□□□ -1.99
SCFD1-223ENST00000557076 A0A1B0GVG6 124 aa2.63□□□□□ -1.99
SCFD1-223ENST00000557076 G3V3Q6 166 aa2.63□□□□□ -1.99
SCFD1-223ENST00000557076 PEX7O00628 323 aa2.63□□□□□ -1.99
SCFD1-223ENST00000557076 NUPR1O60356 82 aa2.63□□□□□ -1.99
SCFD1-223ENST00000557076 NCR2O95944 276 aa2.63□□□□□ -1.99
SCFD1-223ENST00000557076 CXorf1O96002 111 aa2.63□□□□□ -1.99
SCFD1-223ENST00000557076 LTAP01374 205 aa2.63□□□□□ -1.99
SCFD1-223ENST00000557076 NTF3P20783 257 aa2.63□□□□□ -1.99
SCFD1-223ENST00000557076 BTCP35070 178 aa2.63□□□□□ -1.99
SCFD1-223ENST00000557076 RGS21Q2M5E4 152 aa2.63□□□□□ -1.99
SCFD1-223ENST00000557076 FAM229BQ4G0N7 80 aa2.63□□□□□ -1.99
SCFD1-223ENST00000557076 KRTAP5-2Q701N4 177 aa2.63□□□□□ -1.99
SCFD1-223ENST00000557076 Q86TA4 180 aa2.63□□□□□ -1.99
SCFD1-223ENST00000557076 OR2D3Q8NGH3 330 aa2.63□□□□□ -1.99
SCFD1-223ENST00000557076 ENKURQ8TC29 256 aa2.63□□□□□ -1.99
SCFD1-223ENST00000557076 FMC1Q96HJ9 113 aa2.63□□□□□ -1.99
SCFD1-223ENST00000557076 AP1S3Q96PC3 154 aa2.63□□□□□ -1.99
SCFD1-223ENST00000557076 VCX2Q9H322 139 aa2.63□□□□□ -1.99
SCFD1-223ENST00000557076 ANAPC11Q9NYG5 84 aa2.63□□□□□ -1.99
SCFD1-223ENST00000557076 C1orf196B1AJZ1 125 aa2.62□□□□□ -1.99
SCFD1-223ENST00000557076 M0QXV9 152 aa2.62□□□□□ -1.99
SCFD1-223ENST00000557076 COX7A2LO14548 114 aa2.62□□□□□ -1.99
SCFD1-223ENST00000557076 ATP6V1G2O95670 118 aa2.62□□□□□ -1.99
SCFD1-223ENST00000557076 RPL28P46779 137 aaKnown RBP2.62□□□□□ -1.99
SCFD1-223ENST00000557076 CDC34P49427 236 aaPredicted RBP2.62□□□□□ -1.99
SCFD1-223ENST00000557076 SPAG11AQ6PDA7 123 aa2.62□□□□□ -1.99
SCFD1-223ENST00000557076 FAM19A5Q7Z5A7 132 aaPredicted RBP2.62□□□□□ -1.99
SCFD1-223ENST00000557076 TMEM101Q96IK0 257 aa2.62□□□□□ -1.99
SCFD1-223ENST00000557076 BTF3L4Q96K17 158 aa2.62□□□□□ -1.99
SCFD1-223ENST00000557076 RPS10P5Q9NQ39 176 aa2.62□□□□□ -1.99
SCFD1-223ENST00000557076 CDC42SE2Q9NRR3 84 aa2.62□□□□□ -1.99
SCFD1-223ENST00000557076 HSPB11Q9Y547 144 aa2.62□□□□□ -1.99
SCFD1-223ENST00000557076 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.61□□□□□ -1.99
SCFD1-223ENST00000557076 IGKV2-29A2NJV5 120 aaPredicted RBP2.61□□□□□ -1.99
SCFD1-223ENST00000557076 M0R2T5 61 aa2.61□□□□□ -1.99
SCFD1-223ENST00000557076 MBP02144 154 aa2.61□□□□□ -1.99
SCFD1-223ENST00000557076 FHITP49789 147 aa2.61□□□□□ -1.99
SCFD1-223ENST00000557076 SERF2P84101 59 aa2.61□□□□□ -1.99
SCFD1-223ENST00000557076 SEC22CQ9BRL7 303 aa2.61□□□□□ -1.99
SCFD1-223ENST00000557076 TCEAL7Q9BRU2 100 aa2.61□□□□□ -1.99
SCFD1-223ENST00000557076 CYTL1Q9NRR1 136 aa2.61□□□□□ -1.99
SCFD1-223ENST00000557076 FLGP20930 4061 aaPredicted RBP2.61□□□□□ -1.99
SCFD1-223ENST00000557076 IGKV2D-26A0A0A0MRZ7 120 aa2.6□□□□□ -1.99
SCFD1-223ENST00000557076 FAM74A7A6NL05 159 aa2.6□□□□□ -1.99
SCFD1-223ENST00000557076 BCE1O60756 84 aa2.6□□□□□ -1.99
SCFD1-223ENST00000557076 MGPP08493 103 aa2.6□□□□□ -1.99
SCFD1-223ENST00000557076 ATP6V0CP27449 155 aa2.6□□□□□ -1.99
SCFD1-223ENST00000557076 UBE2G1P62253 170 aa2.6□□□□□ -1.99
SCFD1-223ENST00000557076 TRIQKQ629K1 86 aa2.6□□□□□ -1.99
SCFD1-223ENST00000557076 MRPL52Q86TS9 123 aaKnown RBP2.6□□□□□ -1.99
SCFD1-223ENST00000557076 OR10D4PQ8NGN7 298 aa2.6□□□□□ -1.99
SCFD1-223ENST00000557076 ACTR3CQ9C0K3 210 aaPredicted RBP2.6□□□□□ -1.99
SCFD1-223ENST00000557076 SMDT1Q9H4I9 107 aa2.6□□□□□ -1.99
SCFD1-223ENST00000557076 TNFSF18Q9UNG2 199 aa2.6□□□□□ -1.99
SCFD1-223ENST00000557076 F2Z2F3 143 aa2.59□□□□□ -1.99
SCFD1-223ENST00000557076 NDUFA1O15239 70 aa2.59□□□□□ -1.99
SCFD1-223ENST00000557076 APCSP02743 223 aa2.59□□□□□ -1.99
SCFD1-223ENST00000557076 DEFA3P59666 94 aa2.59□□□□□ -1.99
SCFD1-223ENST00000557076 SPAG11BQ08648 103 aa2.59□□□□□ -1.99
SCFD1-223ENST00000557076 UNQ6190/PRO20217Q6UXQ8 127 aa2.59□□□□□ -1.99
SCFD1-223ENST00000557076 ERASQ7Z444 233 aa2.59□□□□□ -1.99
SCFD1-223ENST00000557076 C5orf38Q86SI9 138 aa2.59□□□□□ -1.99
SCFD1-223ENST00000557076 AKAP14Q86UN6 197 aa2.59□□□□□ -1.99
SCFD1-223ENST00000557076 LINC00518Q8N0U6 118 aa2.59□□□□□ -1.99
SCFD1-223ENST00000557076 GATD1Q8NB37 220 aa2.59□□□□□ -1.99
SCFD1-223ENST00000557076 KIR2DL4Q99706 377 aa2.59□□□□□ -1.99
SCFD1-223ENST00000557076 PSMG3Q9BT73 122 aaPredicted RBP2.59□□□□□ -1.99
SCFD1-223ENST00000557076 SMIM3Q9BZL3 60 aa2.59□□□□□ -1.99
SCFD1-223ENST00000557076 C22orf24Q9Y442 160 aa2.59□□□□□ -1.99
SCFD1-223ENST00000557076 CSDC2Q9Y534 153 aaKnown RBP2.59□□□□□ -1.99
SCFD1-223ENST00000557076 ALG5Q9Y673 324 aa2.59□□□□□ -1.99
SCFD1-223ENST00000557076 NDUFC2-KCTD14E9PQ53 114 aa2.58□□□□□ -2
SCFD1-223ENST00000557076 KRTAP4-16G5E9R7 235 aaPredicted RBP2.58□□□□□ -2
SCFD1-223ENST00000557076 I3L3M4 83 aa2.58□□□□□ -2
SCFD1-223ENST00000557076 PLA2G10O15496 165 aa2.58□□□□□ -2
SCFD1-223ENST00000557076 SIX6O95475 246 aa2.58□□□□□ -2
SCFD1-223ENST00000557076 MPC2O95563 127 aa2.58□□□□□ -2
SCFD1-223ENST00000557076 TRGC1P0CF51 173 aa2.58□□□□□ -2
SCFD1-223ENST00000557076 IGLC6P0CF74 106 aa2.58□□□□□ -2
SCFD1-223ENST00000557076 PMCHP20382 165 aa2.58□□□□□ -2
SCFD1-223ENST00000557076 UBE2G2P60604 165 aa2.58□□□□□ -2
SCFD1-223ENST00000557076 RAB14P61106 215 aa2.58□□□□□ -2
SCFD1-223ENST00000557076 C9orf129Q5T035 196 aaKnown RBP2.58□□□□□ -2
SCFD1-223ENST00000557076 TEX261Q6UWH6 196 aa2.58□□□□□ -2
SCFD1-223ENST00000557076 BAGE2Q86Y30 109 aa2.58□□□□□ -2
SCFD1-223ENST00000557076 C9orf62Q8N4C0 152 aa2.58□□□□□ -2
SCFD1-223ENST00000557076 PPP1R1CQ8WVI7 109 aa2.58□□□□□ -2
SCFD1-223ENST00000557076 C6orf48Q9UBA6 75 aa2.58□□□□□ -2
SCFD1-223ENST00000557076 TP73-AS1Q9UF72 201 aa2.58□□□□□ -2
SCFD1-223ENST00000557076 MACF1Q9UPN3 7388 aaKnown RBP2.57□□□□□ -2
SCFD1-223ENST00000557076 SYNE2Q8WXH0 6885 aaKnown RBP2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms