RNA–Protein interactions for RNA: ENST00000556898.5

ATXN3-244, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 990 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-244ENST00000556898 TMEM97Q5BJF2 176 aa3.57□□□□□ -1.84
ATXN3-244ENST00000556898 AMMECR1LQ6DCA0 310 aa3.57□□□□□ -1.84
ATXN3-244ENST00000556898 SH2D6Q7Z4S9 175 aa3.57□□□□□ -1.84
ATXN3-244ENST00000556898 Q8N9P0 234 aaPredicted RBP3.57□□□□□ -1.84
ATXN3-244ENST00000556898 OR10D4PQ8NGN7 298 aa3.57□□□□□ -1.84
ATXN3-244ENST00000556898 BAALCQ8WXS3 180 aa3.57□□□□□ -1.84
ATXN3-244ENST00000556898 IFI27L1Q96BM0 104 aa3.57□□□□□ -1.84
ATXN3-244ENST00000556898 PMCHL2Q9BQD1 86 aa3.57□□□□□ -1.84
ATXN3-244ENST00000556898 TM2D2Q9BX73 214 aa3.57□□□□□ -1.84
ATXN3-244ENST00000556898 KRTAP1-5Q9BYS1 174 aa3.57□□□□□ -1.84
ATXN3-244ENST00000556898 CDC42SE2Q9NRR3 84 aa3.57□□□□□ -1.84
ATXN3-244ENST00000556898 KLK12Q9UKR0 248 aa3.57□□□□□ -1.84
ATXN3-244ENST00000556898 HECTD4Q9Y4D8 3996 aa3.57□□□□□ -1.84
ATXN3-244ENST00000556898 M0R2N4 97 aa3.56□□□□□ -1.84
ATXN3-244ENST00000556898 KRTDAPP60985 99 aa3.56□□□□□ -1.84
ATXN3-244ENST00000556898 DGAT2L7PQ6IED9 249 aa3.56□□□□□ -1.84
ATXN3-244ENST00000556898 ENHOQ6UWT2 76 aa3.56□□□□□ -1.84
ATXN3-244ENST00000556898 ERASQ7Z444 233 aa3.56□□□□□ -1.84
ATXN3-244ENST00000556898 MRPL52Q86TS9 123 aaKnown RBP3.56□□□□□ -1.84
ATXN3-244ENST00000556898 LINC00269Q8N2A0 174 aa3.56□□□□□ -1.84
ATXN3-244ENST00000556898 ZNF664Q8N3J9 261 aa3.56□□□□□ -1.84
ATXN3-244ENST00000556898 OR5A1Q8NGJ0 315 aa3.56□□□□□ -1.84
ATXN3-244ENST00000556898 TMEM18Q96B42 140 aa3.56□□□□□ -1.84
ATXN3-244ENST00000556898 TIMM17AQ99595 171 aa3.56□□□□□ -1.84
ATXN3-244ENST00000556898 UPK3BQ9BT76 320 aa3.56□□□□□ -1.84
ATXN3-244ENST00000556898 Q9H8V8 135 aa3.56□□□□□ -1.84
ATXN3-244ENST00000556898 SPANXA1Q9NS26 97 aa3.56□□□□□ -1.84
ATXN3-244ENST00000556898 DYNC1H1Q14204 4646 aaKnown RBP3.56□□□□□ -1.84
ATXN3-244ENST00000556898 DNAH11Q96DT5 4516 aa3.56□□□□□ -1.84
ATXN3-244ENST00000556898 IGLV10-54A0A075B6I4 117 aa3.55□□□□□ -1.84
ATXN3-244ENST00000556898 A0A087WX48 190 aa3.55□□□□□ -1.84
ATXN3-244ENST00000556898 A0A0J9YXV3 536 aa3.55□□□□□ -1.84
ATXN3-244ENST00000556898 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.55□□□□□ -1.84
ATXN3-244ENST00000556898 H7C423 109 aa3.55□□□□□ -1.84
ATXN3-244ENST00000556898 SIVA1O15304 175 aa3.55□□□□□ -1.84
ATXN3-244ENST00000556898 ATP5LO75964 103 aa3.55□□□□□ -1.84
ATXN3-244ENST00000556898 ANGP03950 147 aaKnown RBP3.55□□□□□ -1.84
ATXN3-244ENST00000556898 PRSS1P07477 247 aa3.55□□□□□ -1.84
ATXN3-244ENST00000556898 DNAH10OSP0CZ25 163 aa3.55□□□□□ -1.84
ATXN3-244ENST00000556898 COX6A2Q02221 97 aa3.55□□□□□ -1.84
ATXN3-244ENST00000556898 LINC01556Q5JQF7 62 aa3.55□□□□□ -1.84
ATXN3-244ENST00000556898 Q6ZN92 141 aa3.55□□□□□ -1.84
ATXN3-244ENST00000556898 UBE2WQ96B02 151 aa3.55□□□□□ -1.84
ATXN3-244ENST00000556898 TMEM141Q96I45 108 aa3.55□□□□□ -1.84
ATXN3-244ENST00000556898 TMEM101Q96IK0 257 aa3.55□□□□□ -1.84
ATXN3-244ENST00000556898 PACRGQ96M98 296 aaPredicted RBP3.55□□□□□ -1.84
ATXN3-244ENST00000556898 AMELXQ99217 191 aa3.55□□□□□ -1.84
ATXN3-244ENST00000556898 TIMM21Q9BVV7 248 aa3.55□□□□□ -1.84
ATXN3-244ENST00000556898 PYGO1Q9Y3Y4 419 aa3.55□□□□□ -1.84
ATXN3-244ENST00000556898 DNAH17Q9UFH2 4485 aa3.54□□□□□ -1.84
ATXN3-244ENST00000556898 IGLV4-69A0A075B6H9 119 aa3.54□□□□□ -1.84
ATXN3-244ENST00000556898 TRAV13-1A0A0B4J241 112 aa3.54□□□□□ -1.84
ATXN3-244ENST00000556898 A0A1B0GUV1 79 aa3.54□□□□□ -1.84
ATXN3-244ENST00000556898 SYS1-DBNDD2H3BUS1 97 aa3.54□□□□□ -1.84
ATXN3-244ENST00000556898 AKR1D1P51857 326 aa3.54□□□□□ -1.84
ATXN3-244ENST00000556898 MRPS36P82909 103 aaKnown RBP3.54□□□□□ -1.84
ATXN3-244ENST00000556898 REG3AQ06141 175 aa3.54□□□□□ -1.84
ATXN3-244ENST00000556898 PMVKQ15126 192 aa3.54□□□□□ -1.84
ATXN3-244ENST00000556898 TEX43Q6ZNM6 134 aa3.54□□□□□ -1.84
ATXN3-244ENST00000556898 ATOH7Q8N100 152 aa3.54□□□□□ -1.84
ATXN3-244ENST00000556898 MAP1LC3CQ9BXW4 147 aa3.54□□□□□ -1.84
ATXN3-244ENST00000556898 VCX2Q9H322 139 aa3.54□□□□□ -1.84
ATXN3-244ENST00000556898 CST9LQ9H4G1 147 aa3.54□□□□□ -1.84
ATXN3-244ENST00000556898 Q9HAA7 133 aa3.54□□□□□ -1.84
ATXN3-244ENST00000556898 MRPL35Q9NZE8 188 aaKnown RBP3.54□□□□□ -1.84
ATXN3-244ENST00000556898 HSPB8Q9UJY1 196 aa3.54□□□□□ -1.84
ATXN3-244ENST00000556898 CHTOPQ9Y3Y2 248 aaKnown RBP3.54□□□□□ -1.84
ATXN3-244ENST00000556898 NBDYA0A0U1RRE5 68 aa3.53□□□□□ -1.84
ATXN3-244ENST00000556898 LINC00959A0A1B0GUT2 108 aa3.53□□□□□ -1.84
ATXN3-244ENST00000556898 C11orf86A6NJI1 115 aa3.53□□□□□ -1.84
ATXN3-244ENST00000556898 RTL8CO15255 209 aa3.53□□□□□ -1.84
ATXN3-244ENST00000556898 CCL25O15444 150 aa3.53□□□□□ -1.84
ATXN3-244ENST00000556898 CDK2AP2O75956 126 aa3.53□□□□□ -1.84
ATXN3-244ENST00000556898 ZNF25P17030 456 aaPredicted RBP3.53□□□□□ -1.84
ATXN3-244ENST00000556898 G0S2P27469 103 aa3.53□□□□□ -1.84
ATXN3-244ENST00000556898 UBE2D1P51668 147 aa3.53□□□□□ -1.84
ATXN3-244ENST00000556898 MAJINQ3KP22 176 aa3.53□□□□□ -1.84
ATXN3-244ENST00000556898 LINC00242Q5T6M2 205 aa3.53□□□□□ -1.84
ATXN3-244ENST00000556898 C10orf25Q5T742 122 aa3.53□□□□□ -1.84
ATXN3-244ENST00000556898 CFAP161Q6P656 301 aa3.53□□□□□ -1.84
ATXN3-244ENST00000556898 CSDC2Q9Y534 153 aaKnown RBP3.53□□□□□ -1.84
ATXN3-244ENST00000556898 TRAV12-1A0A0B4J245 112 aa3.52□□□□□ -1.85
ATXN3-244ENST00000556898 hDV102S1A0JD36 115 aa3.52□□□□□ -1.85
ATXN3-244ENST00000556898 IBA57-AS1B1ANH7 110 aa3.52□□□□□ -1.85
ATXN3-244ENST00000556898 SCGB1D1O95968 90 aa3.52□□□□□ -1.85
ATXN3-244ENST00000556898 CRPP02741 224 aa3.52□□□□□ -1.85
ATXN3-244ENST00000556898 IGLC3P0DOY3 106 aa3.52□□□□□ -1.85
ATXN3-244ENST00000556898 XCL1P47992 114 aa3.52□□□□□ -1.85
ATXN3-244ENST00000556898 PYY3Q5JQD4 70 aa3.52□□□□□ -1.85
ATXN3-244ENST00000556898 LINC01545Q5VT33 79 aa3.52□□□□□ -1.85
ATXN3-244ENST00000556898 KRTAP26-1Q6PEX3 210 aa3.52□□□□□ -1.85
ATXN3-244ENST00000556898 PET117Q6UWS5 81 aa3.52□□□□□ -1.85
ATXN3-244ENST00000556898 C5orf38Q86SI9 138 aa3.52□□□□□ -1.85
ATXN3-244ENST00000556898 MAPKAPK5-AS1Q8N8E1 139 aa3.52□□□□□ -1.85
ATXN3-244ENST00000556898 CHCHD10Q8WYQ3 142 aaPredicted RBP3.52□□□□□ -1.85
ATXN3-244ENST00000556898 CHAC1Q9BUX1 264 aa3.52□□□□□ -1.85
ATXN3-244ENST00000556898 PRR34Q9NV39 138 aa3.52□□□□□ -1.85
ATXN3-244ENST00000556898 FAT2Q9NYQ8 4349 aa3.52□□□□□ -1.85
ATXN3-244ENST00000556898 IGHV3-64A0A075B6Q5 118 aa3.51□□□□□ -1.85
ATXN3-244ENST00000556898 IGKV2D-24A0A075B6R9 120 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 153 ms