RNA–Protein interactions for RNA: ENST00000556827.1

HIF1A-209, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 2

Gene HIF1A, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-209ENST00000556827 FXYD6-FXYD2A0A087WZ82 144 aa2.91□□□□□ -1.94
HIF1A-209ENST00000556827 IGKV2-24A0A0C4DH68 120 aa2.91□□□□□ -1.94
HIF1A-209ENST00000556827 MUC21A0A0G2JKD1 596 aa2.91□□□□□ -1.94
HIF1A-209ENST00000556827 MUC21A0A140T8X8 626 aa2.91□□□□□ -1.94
HIF1A-209ENST00000556827 MAP1LC3B2A6NCE7 125 aa2.91□□□□□ -1.94
HIF1A-209ENST00000556827 NDUFS6O75380 124 aaKnown RBP2.91□□□□□ -1.94
HIF1A-209ENST00000556827 CXCL1P09341 107 aa2.91□□□□□ -1.94
HIF1A-209ENST00000556827 CXCL5P42830 114 aa2.91□□□□□ -1.94
HIF1A-209ENST00000556827 COX6A2Q02221 97 aa2.91□□□□□ -1.94
HIF1A-209ENST00000556827 COTL1Q14019 142 aa2.91□□□□□ -1.94
HIF1A-209ENST00000556827 RPL7L1Q6DKI1 246 aaKnown RBP2.91□□□□□ -1.94
HIF1A-209ENST00000556827 SPINK6Q6UWN8 80 aa2.91□□□□□ -1.94
HIF1A-209ENST00000556827 NTM-AS1Q6ZSK4 140 aa2.91□□□□□ -1.94
HIF1A-209ENST00000556827 CAMK2N1Q7Z7J9 78 aa2.91□□□□□ -1.94
HIF1A-209ENST00000556827 OR10AG1Q8NH19 301 aa2.91□□□□□ -1.94
HIF1A-209ENST00000556827 LYPD6BQ8NI32 183 aa2.91□□□□□ -1.94
HIF1A-209ENST00000556827 SPACA4Q8TDM5 124 aa2.91□□□□□ -1.94
HIF1A-209ENST00000556827 MAP1LC3BQ9GZQ8 125 aa2.91□□□□□ -1.94
HIF1A-209ENST00000556827 PLAC8Q9NZF1 115 aa2.91□□□□□ -1.94
HIF1A-209ENST00000556827 IGKV3OR2-268A0A0C4DH90 116 aa2.9□□□□□ -1.95
HIF1A-209ENST00000556827 A0A0J9YXV3 536 aa2.9□□□□□ -1.95
HIF1A-209ENST00000556827 F2Z2F3 143 aa2.9□□□□□ -1.95
HIF1A-209ENST00000556827 TRGC1P0CF51 173 aa2.9□□□□□ -1.95
HIF1A-209ENST00000556827 NKX2-5P52952 324 aaPredicted RBP2.9□□□□□ -1.95
HIF1A-209ENST00000556827 RPS20P60866 119 aaKnown RBP2.9□□□□□ -1.95
HIF1A-209ENST00000556827 CACNG7P62955 275 aa2.9□□□□□ -1.95
HIF1A-209ENST00000556827 DEFB116Q30KQ4 102 aa2.9□□□□□ -1.95
HIF1A-209ENST00000556827 FER1L6-AS1Q8NA97 138 aa2.9□□□□□ -1.95
HIF1A-209ENST00000556827 SFT2D1Q8WV19 159 aa2.9□□□□□ -1.95
HIF1A-209ENST00000556827 IGKV2-28A0A075B6P5 120 aa2.89□□□□□ -1.95
HIF1A-209ENST00000556827 UMAD1C9J7I0 102 aa2.89□□□□□ -1.95
HIF1A-209ENST00000556827 M0QY20 66 aa2.89□□□□□ -1.95
HIF1A-209ENST00000556827 IGKV2D-28P01615 120 aa2.89□□□□□ -1.95
HIF1A-209ENST00000556827 PRR3P79522 188 aaKnown RBP2.89□□□□□ -1.95
HIF1A-209ENST00000556827 ZNF726P1Q15940 193 aa2.89□□□□□ -1.95
HIF1A-209ENST00000556827 RNASEKQ6P5S7 137 aaKnown RBP2.89□□□□□ -1.95
HIF1A-209ENST00000556827 KRTAP26-1Q6PEX3 210 aa2.89□□□□□ -1.95
HIF1A-209ENST00000556827 RASL11AQ6T310 242 aa2.89□□□□□ -1.95
HIF1A-209ENST00000556827 SMIM15Q7Z3B0 74 aa2.89□□□□□ -1.95
HIF1A-209ENST00000556827 KCNRGQ8N5I3 272 aa2.89□□□□□ -1.95
HIF1A-209ENST00000556827 OR2D3Q8NGH3 330 aa2.89□□□□□ -1.95
HIF1A-209ENST00000556827 BTF3L4Q96K17 158 aa2.89□□□□□ -1.95
HIF1A-209ENST00000556827 NIT2Q9NQR4 276 aa2.89□□□□□ -1.95
HIF1A-209ENST00000556827 BIN3Q9NQY0 253 aa2.89□□□□□ -1.95
HIF1A-209ENST00000556827 ALG5Q9Y673 324 aa2.89□□□□□ -1.95
HIF1A-209ENST00000556827 DNAH5Q8TE73 4624 aa2.89□□□□□ -1.95
HIF1A-209ENST00000556827 IGLV4-60A0A075B6I1 120 aa2.88□□□□□ -1.95
HIF1A-209ENST00000556827 TEX46H3BTG2 121 aa2.88□□□□□ -1.95
HIF1A-209ENST00000556827 IFNA1P01562 189 aa2.88□□□□□ -1.95
HIF1A-209ENST00000556827 EIF5AP63241 154 aaKnown RBP2.88□□□□□ -1.95
HIF1A-209ENST00000556827 IFITM3Q01628 133 aa2.88□□□□□ -1.95
HIF1A-209ENST00000556827 TEX261Q6UWH6 196 aa2.88□□□□□ -1.95
HIF1A-209ENST00000556827 FAM213BQ8TBF2 198 aa2.88□□□□□ -1.95
HIF1A-209ENST00000556827 ISOC2Q96AB3 205 aa2.88□□□□□ -1.95
HIF1A-209ENST00000556827 MYCBP2O75592 4640 aa2.87□□□□□ -1.95
HIF1A-209ENST00000556827 GVQW2A0A096LPI5 108 aaPredicted RBP2.87□□□□□ -1.95
HIF1A-209ENST00000556827 TRAV26-2A0A0B4J265 109 aa2.87□□□□□ -1.95
HIF1A-209ENST00000556827 IGHV1-58A0A0C4DH39 117 aa2.87□□□□□ -1.95
HIF1A-209ENST00000556827 A0A1B0GV50 99 aa2.87□□□□□ -1.95
HIF1A-209ENST00000556827 ARPC5O15511 151 aa2.87□□□□□ -1.95
HIF1A-209ENST00000556827 NCR2O95944 276 aa2.87□□□□□ -1.95
HIF1A-209ENST00000556827 MT-ND6P03923 174 aa2.87□□□□□ -1.95
HIF1A-209ENST00000556827 RPL35P42766 123 aaKnown RBP2.87□□□□□ -1.95
HIF1A-209ENST00000556827 XCL1P47992 114 aa2.87□□□□□ -1.95
HIF1A-209ENST00000556827 SS18Q15532 418 aa2.87□□□□□ -1.95
HIF1A-209ENST00000556827 ZNF664Q8N3J9 261 aa2.87□□□□□ -1.95
HIF1A-209ENST00000556827 CARD19Q96LW7 228 aa2.87□□□□□ -1.95
HIF1A-209ENST00000556827 MANBALQ9NQG1 85 aa2.87□□□□□ -1.95
HIF1A-209ENST00000556827 A0A096LNI7 61 aa2.86□□□□□ -1.95
HIF1A-209ENST00000556827 A0A0U1RQV1 116 aa2.86□□□□□ -1.95
HIF1A-209ENST00000556827 APCSP02743 223 aa2.86□□□□□ -1.95
HIF1A-209ENST00000556827 FGF6P10767 208 aa2.86□□□□□ -1.95
HIF1A-209ENST00000556827 ZNF25P17030 456 aaPredicted RBP2.86□□□□□ -1.95
HIF1A-209ENST00000556827 PMCHP20382 165 aa2.86□□□□□ -1.95
HIF1A-209ENST00000556827 NTF3P20783 257 aa2.86□□□□□ -1.95
HIF1A-209ENST00000556827 GNG4P50150 75 aa2.86□□□□□ -1.95
HIF1A-209ENST00000556827 SYCNQ0VAF6 134 aa2.86□□□□□ -1.95
HIF1A-209ENST00000556827 SMAGPQ0VAQ4 97 aa2.86□□□□□ -1.95
HIF1A-209ENST00000556827 LINC00483Q53H64 154 aa2.86□□□□□ -1.95
HIF1A-209ENST00000556827 Q5BKY6 102 aa2.86□□□□□ -1.95
HIF1A-209ENST00000556827 EIF5AL1Q6IS14 154 aaKnown RBP2.86□□□□□ -1.95
HIF1A-209ENST00000556827 LYZL1Q6UWQ5 148 aa2.86□□□□□ -1.95
HIF1A-209ENST00000556827 LINC00173Q6ZV60 143 aa2.86□□□□□ -1.95
HIF1A-209ENST00000556827 PCP2Q8IVA1 136 aa2.86□□□□□ -1.95
HIF1A-209ENST00000556827 C15orf56Q8N910 161 aa2.86□□□□□ -1.95
HIF1A-209ENST00000556827 OR5A1Q8NGJ0 315 aa2.86□□□□□ -1.95
HIF1A-209ENST00000556827 TSKUQ8WUA8 353 aa2.86□□□□□ -1.95
HIF1A-209ENST00000556827 MBD3L1Q8WWY6 194 aa2.86□□□□□ -1.95
HIF1A-209ENST00000556827 SMIM12Q96EX1 92 aa2.86□□□□□ -1.95
HIF1A-209ENST00000556827 FAM210AQ96ND0 272 aa2.86□□□□□ -1.95
HIF1A-209ENST00000556827 GNG13Q9P2W3 67 aa2.86□□□□□ -1.95
HIF1A-209ENST00000556827 PSORS1C2Q9UIG4 136 aa2.86□□□□□ -1.95
HIF1A-209ENST00000556827 LOC107984640A0A0U1RRK4 108 aa2.85□□□□□ -1.95
HIF1A-209ENST00000556827 KANTRA0A1W2PQU2 76 aa2.85□□□□□ -1.95
HIF1A-209ENST00000556827 C1orf196B1AJZ1 125 aa2.85□□□□□ -1.95
HIF1A-209ENST00000556827 I3L3M4 83 aa2.85□□□□□ -1.95
HIF1A-209ENST00000556827 CCL25O15444 150 aa2.85□□□□□ -1.95
HIF1A-209ENST00000556827 PDE6DO43924 150 aa2.85□□□□□ -1.95
HIF1A-209ENST00000556827 IGLC6P0CF74 106 aa2.85□□□□□ -1.95
HIF1A-209ENST00000556827 CENPWQ5EE01 88 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms