RNA–Protein interactions for RNA: ENST00000556737.1

SHMT2-224, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-224ENST00000556737 Q6ZN92 141 aa6.74□□□□□ -1.33
SHMT2-224ENST00000556737 LINC00173Q6ZV60 143 aa6.74□□□□□ -1.33
SHMT2-224ENST00000556737 LINC00269Q8N2A0 174 aa6.74□□□□□ -1.33
SHMT2-224ENST00000556737 C20orf203Q8NBC4 194 aa6.74□□□□□ -1.33
SHMT2-224ENST00000556737 TOMM6Q96B49 74 aa6.74□□□□□ -1.33
SHMT2-224ENST00000556737 IFI27L1Q96BM0 104 aa6.74□□□□□ -1.33
SHMT2-224ENST00000556737 PKHD1L1Q86WI1 4243 aa6.73□□□□□ -1.33
SHMT2-224ENST00000556737 LOC105371267A0A1B0GV96 52 aa6.73□□□□□ -1.33
SHMT2-224ENST00000556737 LINC01549A6NIU2 74 aa6.73□□□□□ -1.33
SHMT2-224ENST00000556737 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.73□□□□□ -1.33
SHMT2-224ENST00000556737 PRSS1P07477 247 aa6.73□□□□□ -1.33
SHMT2-224ENST00000556737 TMEM101Q96IK0 257 aa6.73□□□□□ -1.33
SHMT2-224ENST00000556737 A0A1B0GUV1 79 aa6.72□□□□□ -1.33
SHMT2-224ENST00000556737 C20orf202A1L168 122 aa6.72□□□□□ -1.33
SHMT2-224ENST00000556737 USP17L23D6RBM5 183 aa6.72□□□□□ -1.33
SHMT2-224ENST00000556737 SCGB1D1O95968 90 aa6.72□□□□□ -1.33
SHMT2-224ENST00000556737 REG3AQ06141 175 aa6.72□□□□□ -1.33
SHMT2-224ENST00000556737 SRRM2Q9UQ35 2752 aaKnown RBP6.72□□□□□ -1.33
SHMT2-224ENST00000556737 C3orf79P0CE67 100 aa6.71□□□□□ -1.34
SHMT2-224ENST00000556737 FGF6P10767 208 aa6.71□□□□□ -1.34
SHMT2-224ENST00000556737 ERASQ7Z444 233 aa6.71□□□□□ -1.34
SHMT2-224ENST00000556737 OR5A1Q8NGJ0 315 aa6.71□□□□□ -1.34
SHMT2-224ENST00000556737 TMEM141Q96I45 108 aa6.71□□□□□ -1.34
SHMT2-224ENST00000556737 SPANXA1Q9NS26 97 aa6.71□□□□□ -1.34
SHMT2-224ENST00000556737 IGLV10-54A0A075B6I4 117 aa6.7□□□□□ -1.34
SHMT2-224ENST00000556737 SYS1-DBNDD2H3BUS1 97 aa6.7□□□□□ -1.34
SHMT2-224ENST00000556737 INAFM2P0DMQ5 153 aa6.7□□□□□ -1.34
SHMT2-224ENST00000556737 C14orf177Q52M58 125 aa6.7□□□□□ -1.34
SHMT2-224ENST00000556737 RNASE13Q5GAN3 156 aaKnown RBP6.7□□□□□ -1.34
SHMT2-224ENST00000556737 PAPPA-AS1Q5QFB9 102 aa6.7□□□□□ -1.34
SHMT2-224ENST00000556737 SCXQ7RTU7 201 aa6.7□□□□□ -1.34
SHMT2-224ENST00000556737 TIMM17AQ99595 171 aa6.7□□□□□ -1.34
SHMT2-224ENST00000556737 OPRPNQ99935 248 aaPredicted RBP6.7□□□□□ -1.34
SHMT2-224ENST00000556737 UBE2D4Q9Y2X8 147 aa6.7□□□□□ -1.34
SHMT2-224ENST00000556737 IGKV3OR2-268A0A0C4DH90 116 aa6.69□□□□□ -1.34
SHMT2-224ENST00000556737 H7C423 109 aa6.69□□□□□ -1.34
SHMT2-224ENST00000556737 TEX43Q6ZNM6 134 aa6.69□□□□□ -1.34
SHMT2-224ENST00000556737 Q6ZUT4 128 aa6.69□□□□□ -1.34
SHMT2-224ENST00000556737 VCX2Q9H322 139 aa6.69□□□□□ -1.34
SHMT2-224ENST00000556737 IGLV4-3A0A075B6K6 122 aa6.68□□□□□ -1.34
SHMT2-224ENST00000556737 TRAV8-4A0A0B4J246 113 aa6.68□□□□□ -1.34
SHMT2-224ENST00000556737 IGIPA6NJ69 53 aa6.68□□□□□ -1.34
SHMT2-224ENST00000556737 ZC2HC1BQ5TFG8 222 aa6.68□□□□□ -1.34
SHMT2-224ENST00000556737 PET117Q6UWS5 81 aa6.68□□□□□ -1.34
SHMT2-224ENST00000556737 PMCHL2Q9BQD1 86 aa6.68□□□□□ -1.34
SHMT2-224ENST00000556737 C2orf88Q9BSF0 95 aa6.68□□□□□ -1.34
SHMT2-224ENST00000556737 TIMM21Q9BVV7 248 aa6.68□□□□□ -1.34
SHMT2-224ENST00000556737 PYGO1Q9Y3Y4 419 aa6.68□□□□□ -1.34
SHMT2-224ENST00000556737 FAM229AH3BQW9 127 aa6.67□□□□□ -1.34
SHMT2-224ENST00000556737 ZNF25P17030 456 aaPredicted RBP6.67□□□□□ -1.34
SHMT2-224ENST00000556737 PMVKQ15126 192 aa6.67□□□□□ -1.34
SHMT2-224ENST00000556737 MRPL52Q86TS9 123 aaKnown RBP6.67□□□□□ -1.34
SHMT2-224ENST00000556737 LINC00528Q8N1L1 170 aa6.67□□□□□ -1.34
SHMT2-224ENST00000556737 ZNF664Q8N3J9 261 aa6.67□□□□□ -1.34
SHMT2-224ENST00000556737 CHAC1Q9BUX1 264 aa6.67□□□□□ -1.34
SHMT2-224ENST00000556737 CHTOPQ9Y3Y2 248 aaKnown RBP6.67□□□□□ -1.34
SHMT2-224ENST00000556737 KRTAP10-4P60372 401 aaPredicted RBP6.66□□□□□ -1.34
SHMT2-224ENST00000556737 ATOH7Q8N100 152 aa6.66□□□□□ -1.34
SHMT2-224ENST00000556737 C15orf56Q8N910 161 aa6.66□□□□□ -1.34
SHMT2-224ENST00000556737 CIRBP-AS1Q8TBR5 109 aa6.66□□□□□ -1.34
SHMT2-224ENST00000556737 FAT3Q8TDW7 4589 aa6.65□□□□□ -1.34
SHMT2-224ENST00000556737 TRAV13-1A0A0B4J241 112 aa6.65□□□□□ -1.34
SHMT2-224ENST00000556737 TRAV12-1A0A0B4J245 112 aa6.65□□□□□ -1.34
SHMT2-224ENST00000556737 NPSP0C0P6 89 aa6.65□□□□□ -1.34
SHMT2-224ENST00000556737 CNBPP62633 177 aaKnown RBP6.65□□□□□ -1.34
SHMT2-224ENST00000556737 MRPS36P82909 103 aaKnown RBP6.65□□□□□ -1.34
SHMT2-224ENST00000556737 JOSD1Q15040 202 aaPredicted RBP6.65□□□□□ -1.34
SHMT2-224ENST00000556737 C9orf163Q8N9P6 203 aa6.65□□□□□ -1.34
SHMT2-224ENST00000556737 CST9LQ9H4G1 147 aa6.65□□□□□ -1.34
SHMT2-224ENST00000556737 CSDC2Q9Y534 153 aaKnown RBP6.65□□□□□ -1.34
SHMT2-224ENST00000556737 FLG2Q5D862 2391 aaPredicted RBP6.65□□□□□ -1.35
SHMT2-224ENST00000556737 GAGE12HA6NDE8 117 aa6.64□□□□□ -1.35
SHMT2-224ENST00000556737 PANO1I0J062 215 aa6.64□□□□□ -1.35
SHMT2-224ENST00000556737 DPM2O94777 84 aa6.64□□□□□ -1.35
SHMT2-224ENST00000556737 IGKCP01834 107 aa6.64□□□□□ -1.35
SHMT2-224ENST00000556737 SLPIP03973 132 aa6.64□□□□□ -1.35
SHMT2-224ENST00000556737 SMIM6P0DI80 62 aa6.64□□□□□ -1.35
SHMT2-224ENST00000556737 ODF1Q14990 250 aa6.64□□□□□ -1.35
SHMT2-224ENST00000556737 PYY3Q5JQD4 70 aa6.64□□□□□ -1.35
SHMT2-224ENST00000556737 LINC01545Q5VT33 79 aa6.64□□□□□ -1.35
SHMT2-224ENST00000556737 CDC42SE2Q9NRR3 84 aa6.64□□□□□ -1.35
SHMT2-224ENST00000556737 MRPL35Q9NZE8 188 aaKnown RBP6.64□□□□□ -1.35
SHMT2-224ENST00000556737 hDV102S1A0JD36 115 aa6.63□□□□□ -1.35
SHMT2-224ENST00000556737 HSBP1L1C9JCN9 74 aa6.63□□□□□ -1.35
SHMT2-224ENST00000556737 F8VRH5 84 aa6.63□□□□□ -1.35
SHMT2-224ENST00000556737 S100A12P80511 92 aa6.63□□□□□ -1.35
SHMT2-224ENST00000556737 SDIM1Q6ZPB5 146 aa6.63□□□□□ -1.35
SHMT2-224ENST00000556737 CHCHD10Q8WYQ3 142 aaPredicted RBP6.63□□□□□ -1.35
SHMT2-224ENST00000556737 AMELXQ99217 191 aa6.63□□□□□ -1.35
SHMT2-224ENST00000556737 GEMIN7Q9H840 131 aaKnown RBP6.63□□□□□ -1.35
SHMT2-224ENST00000556737 DMBT1Q9UGM3 2413 aaPredicted RBP6.63□□□□□ -1.35
SHMT2-224ENST00000556737 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.63□□□□□ -1.35
SHMT2-224ENST00000556737 LRP1Q07954 4544 aaKnown RBP6.62□□□□□ -1.35
SHMT2-224ENST00000556737 A0A0J9YXV3 536 aa6.62□□□□□ -1.35
SHMT2-224ENST00000556737 PLA2G1BP04054 148 aaKnown RBP6.62□□□□□ -1.35
SHMT2-224ENST00000556737 PLNP26678 52 aa6.62□□□□□ -1.35
SHMT2-224ENST00000556737 FOXI1Q12951 378 aa6.62□□□□□ -1.35
SHMT2-224ENST00000556737 CIRBPQ14011 172 aaKnown RBP6.62□□□□□ -1.35
SHMT2-224ENST00000556737 SS18Q15532 418 aa6.62□□□□□ -1.35
SHMT2-224ENST00000556737 TMEM170BQ5T4T1 132 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 92.3 ms