RNA–Protein interactions for RNA: ENST00000556498.1

TDP1-215, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 597 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-215ENST00000556498 A0A087WYN8 130 aa4.1□□□□□ -1.75
TDP1-215ENST00000556498 IGLV5-52A0A0A0MRZ9 124 aa4.1□□□□□ -1.75
TDP1-215ENST00000556498 IGKV2-29A2NJV5 120 aaPredicted RBP4.1□□□□□ -1.75
TDP1-215ENST00000556498 CGB3P0DN86 165 aa4.1□□□□□ -1.75
TDP1-215ENST00000556498 CGB7P0DN87 165 aa4.1□□□□□ -1.75
TDP1-215ENST00000556498 Q8NAQ8 132 aa4.1□□□□□ -1.75
TDP1-215ENST00000556498 MYO7BQ6PIF6 2116 aa4.1□□□□□ -1.75
TDP1-215ENST00000556498 MPDZO75970 2070 aa4.09□□□□□ -1.75
TDP1-215ENST00000556498 IGHV7-4-1A0A0J9YVY3 117 aa4.09□□□□□ -1.75
TDP1-215ENST00000556498 NDUFA4O00483 81 aa4.09□□□□□ -1.75
TDP1-215ENST00000556498 EGFEM1PQ0D2K5 195 aa4.09□□□□□ -1.75
TDP1-215ENST00000556498 PRR4Q16378 134 aa4.09□□□□□ -1.75
TDP1-215ENST00000556498 C9orf129Q5T035 196 aaKnown RBP4.09□□□□□ -1.75
TDP1-215ENST00000556498 NTM-AS1Q6ZSK4 140 aa4.09□□□□□ -1.75
TDP1-215ENST00000556498 GAFA1Q96PS6 74 aa4.09□□□□□ -1.75
TDP1-215ENST00000556498 ZNF580Q9UK33 172 aa4.09□□□□□ -1.75
TDP1-215ENST00000556498 HTTP42858 3142 aa4.09□□□□□ -1.75
TDP1-215ENST00000556498 IGLV10-54A0A075B6I4 117 aa4.08□□□□□ -1.76
TDP1-215ENST00000556498 TRGV2A0A075B6R0 118 aa4.08□□□□□ -1.76
TDP1-215ENST00000556498 A0A1W2PNM2 257 aa4.08□□□□□ -1.76
TDP1-215ENST00000556498 H0Y9P7 68 aa4.08□□□□□ -1.76
TDP1-215ENST00000556498 H3BRN7 92 aa4.08□□□□□ -1.76
TDP1-215ENST00000556498 IGHV3-53P01767 116 aa4.08□□□□□ -1.76
TDP1-215ENST00000556498 IGKV3-11P04433 115 aa4.08□□□□□ -1.76
TDP1-215ENST00000556498 SPTBP11277 2137 aa4.08□□□□□ -1.76
TDP1-215ENST00000556498 LUZP6Q538Z0 58 aa4.08□□□□□ -1.76
TDP1-215ENST00000556498 REG3GQ6UW15 175 aa4.08□□□□□ -1.76
TDP1-215ENST00000556498 SMIM11BQ8TCY0 68 aa4.08□□□□□ -1.76
TDP1-215ENST00000556498 DSCAML1Q8TD84 2053 aa4.08□□□□□ -1.76
TDP1-215ENST00000556498 COX14Q96I36 57 aa4.08□□□□□ -1.76
TDP1-215ENST00000556498 CHCHD7Q9BUK0 85 aa4.08□□□□□ -1.76
TDP1-215ENST00000556498 C8orf17Q9NRJ1 99 aa4.08□□□□□ -1.76
TDP1-215ENST00000556498 IGHV3-15A0A0B4J1V0 119 aa4.07□□□□□ -1.76
TDP1-215ENST00000556498 CMC4P56277 68 aaPredicted RBP4.07□□□□□ -1.76
TDP1-215ENST00000556498 DEFB134Q4QY38 66 aa4.07□□□□□ -1.76
TDP1-215ENST00000556498 CSAG1Q6PB30 78 aa4.07□□□□□ -1.76
TDP1-215ENST00000556498 LYPD2Q6UXB3 125 aa4.07□□□□□ -1.76
TDP1-215ENST00000556498 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.07□□□□□ -1.76
TDP1-215ENST00000556498 INTS1Q8N201 2190 aaKnown RBP4.07□□□□□ -1.76
TDP1-215ENST00000556498 DSCAMO60469 2012 aa4.07□□□□□ -1.76
TDP1-215ENST00000556498 MED13Q9UHV7 2174 aa4.06□□□□□ -1.76
TDP1-215ENST00000556498 IGLV1-50A0A075B6I6 118 aa4.06□□□□□ -1.76
TDP1-215ENST00000556498 IGLV4-3A0A075B6K6 122 aa4.06□□□□□ -1.76
TDP1-215ENST00000556498 IGLV1-47P01700 117 aa4.06□□□□□ -1.76
TDP1-215ENST00000556498 CLPSP04118 112 aa4.06□□□□□ -1.76
TDP1-215ENST00000556498 IGKV4-1P06312 121 aa4.06□□□□□ -1.76
TDP1-215ENST00000556498 IGHV1-8P0DP01 117 aa4.06□□□□□ -1.76
TDP1-215ENST00000556498 KCNQ1DNQ9H478 68 aa4.06□□□□□ -1.76
TDP1-215ENST00000556498 NOTCH4Q99466 2003 aa4.05□□□□□ -1.76
TDP1-215ENST00000556498 IGLV5-37A0A075B6J1 123 aa4.05□□□□□ -1.76
TDP1-215ENST00000556498 IGHV3-64A0A075B6Q5 118 aa4.05□□□□□ -1.76
TDP1-215ENST00000556498 IGHV1-3A0A0C4DH29 117 aa4.05□□□□□ -1.76
TDP1-215ENST00000556498 CLPSL1A2RUU4 121 aa4.05□□□□□ -1.76
TDP1-215ENST00000556498 KRTAP4-16G5E9R7 235 aaPredicted RBP4.05□□□□□ -1.76
TDP1-215ENST00000556498 NNATQ16517 81 aa4.05□□□□□ -1.76
TDP1-215ENST00000556498 CEP192Q8TEP8 1941 aa4.05□□□□□ -1.76
TDP1-215ENST00000556498 ADAMTS9Q9P2N4 1935 aa4.05□□□□□ -1.76
TDP1-215ENST00000556498 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.04□□□□□ -1.76
TDP1-215ENST00000556498 IGHV3-64DA0A0J9YX35 117 aa4.04□□□□□ -1.76
TDP1-215ENST00000556498 SPTY2D1-AS1A0A0U1RR47 76 aa4.04□□□□□ -1.76
TDP1-215ENST00000556498 A8MWP4 228 aa4.04□□□□□ -1.76
TDP1-215ENST00000556498 IGKV3-15P01624 115 aa4.04□□□□□ -1.76
TDP1-215ENST00000556498 IGLV1-44P01699 117 aa4.04□□□□□ -1.76
TDP1-215ENST00000556498 MGPP08493 103 aa4.04□□□□□ -1.76
TDP1-215ENST00000556498 HIGD2BQ4VC39 106 aa4.04□□□□□ -1.76
TDP1-215ENST00000556498 C1orf137Q5JT78 98 aa4.04□□□□□ -1.76
TDP1-215ENST00000556498 Q6ZR54 194 aa4.04□□□□□ -1.76
TDP1-215ENST00000556498 Q6ZTI0 123 aa4.04□□□□□ -1.76
TDP1-215ENST00000556498 CAMK2N1Q7Z7J9 78 aa4.04□□□□□ -1.76
TDP1-215ENST00000556498 TMEM167AQ8TBQ9 72 aa4.04□□□□□ -1.76
TDP1-215ENST00000556498 FAM215AQ9Y5M1 114 aa4.04□□□□□ -1.76
TDP1-215ENST00000556498 TNRC6BQ9UPQ9 1833 aaKnown RBP4.04□□□□□ -1.76
TDP1-215ENST00000556498 HEATR5BQ9P2D3 2071 aa4.03□□□□□ -1.76
TDP1-215ENST00000556498 LYZP61626 148 aa4.03□□□□□ -1.76
TDP1-215ENST00000556498 SPATA8Q6RVD6 105 aa4.03□□□□□ -1.76
TDP1-215ENST00000556498 ADM2Q7Z4H4 148 aa4.03□□□□□ -1.76
TDP1-215ENST00000556498 TTTY12Q9BZ98 90 aa4.03□□□□□ -1.76
TDP1-215ENST00000556498 BPTFQ12830 3046 aa4.03□□□□□ -1.77
TDP1-215ENST00000556498 FER1L5A0AVI2 2057 aa4.02□□□□□ -1.77
TDP1-215ENST00000556498 PRRC2BQ5JSZ5 2229 aaKnown RBP4.02□□□□□ -1.77
TDP1-215ENST00000556498 TRGV4A0A0C4DH28 118 aa4.02□□□□□ -1.77
TDP1-215ENST00000556498 IGHV3-66A0A0C4DH42 116 aa4.02□□□□□ -1.77
TDP1-215ENST00000556498 UQCR11O14957 56 aa4.02□□□□□ -1.77
TDP1-215ENST00000556498 IGLV2-23P01705 113 aa4.02□□□□□ -1.77
TDP1-215ENST00000556498 RPL39P62891 51 aaKnown RBP4.02□□□□□ -1.77
TDP1-215ENST00000556498 RPL39LQ96EH5 51 aaKnown RBP4.02□□□□□ -1.77
TDP1-215ENST00000556498 DMAC1Q96GE9 116 aa4.02□□□□□ -1.77
TDP1-215ENST00000556498 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.01□□□□□ -1.77
TDP1-215ENST00000556498 IGKV1-17P01599 117 aa4.01□□□□□ -1.77
TDP1-215ENST00000556498 COX7BP24311 80 aa4.01□□□□□ -1.77
TDP1-215ENST00000556498 SPINK7P58062 85 aa4.01□□□□□ -1.77
TDP1-215ENST00000556498 DEFB112Q30KQ8 113 aa4.01□□□□□ -1.77
TDP1-215ENST00000556498 SMIM29Q86T20 159 aa4.01□□□□□ -1.77
TDP1-215ENST00000556498 COA5Q86WW8 74 aa4.01□□□□□ -1.77
TDP1-215ENST00000556498 IGLV4-60A0A075B6I1 120 aa4□□□□□ -1.77
TDP1-215ENST00000556498 IGLV7-46A0A075B6I9 117 aa4□□□□□ -1.77
TDP1-215ENST00000556498 CYSRT1A8MQ03 144 aa4□□□□□ -1.77
TDP1-215ENST00000556498 IGHV1-46P01743 117 aa4□□□□□ -1.77
TDP1-215ENST00000556498 KRTAP25-1Q3LHN0 102 aa4□□□□□ -1.77
TDP1-215ENST00000556498 C20orf166-AS1Q96NR2 134 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms