RNA–Protein interactions for RNA: ENST00000556285.1

TGFB3-204, Transcript of transforming growth factor beta 3, humanhuman

TSL 1 (best) BASIC

Gene TGFB3, Length 1,280 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-204ENST00000556285 PPP1R17O96001 155 aa8.14□□□□□ -1.11
TGFB3-204ENST00000556285 SRSF3P84103 164 aaKnown RBP8.14□□□□□ -1.11
TGFB3-204ENST00000556285 SPAG11BQ08648 103 aa8.14□□□□□ -1.11
TGFB3-204ENST00000556285 C2orf48Q96LS8 159 aa8.14□□□□□ -1.11
TGFB3-204ENST00000556285 TIMM21Q9BVV7 248 aa8.14□□□□□ -1.11
TGFB3-204ENST00000556285 SMIM27A0A1W2PRY6 76 aa8.13□□□□□ -1.11
TGFB3-204ENST00000556285 ADIRFQ15847 76 aa8.13□□□□□ -1.11
TGFB3-204ENST00000556285 FAM74A3Q4VXF1 159 aa8.13□□□□□ -1.11
TGFB3-204ENST00000556285 LCE2AQ5TA79 106 aaPredicted RBP8.13□□□□□ -1.11
TGFB3-204ENST00000556285 KRTAP11-1Q8IUC1 163 aa8.13□□□□□ -1.11
TGFB3-204ENST00000556285 PPP1R2P9O14990 202 aa8.12□□□□□ -1.11
TGFB3-204ENST00000556285 TNFRSF6BO95407 300 aa8.12□□□□□ -1.11
TGFB3-204ENST00000556285 MT-ND6P03923 174 aa8.12□□□□□ -1.11
TGFB3-204ENST00000556285 C10orf25Q5T742 122 aa8.12□□□□□ -1.11
TGFB3-204ENST00000556285 C20orf78Q9BR46 151 aa8.12□□□□□ -1.11
TGFB3-204ENST00000556285 TRBV24-1A0A075B6N3 115 aa8.11□□□□□ -1.11
TGFB3-204ENST00000556285 IGHV3OR16-9A0A0B4J2B5 98 aa8.11□□□□□ -1.11
TGFB3-204ENST00000556285 FAM168BA1KXE4 195 aa8.11□□□□□ -1.11
TGFB3-204ENST00000556285 TCAPO15273 167 aa8.11□□□□□ -1.11
TGFB3-204ENST00000556285 CKS2P33552 79 aa8.11□□□□□ -1.11
TGFB3-204ENST00000556285 SMAGPQ0VAQ4 97 aa8.11□□□□□ -1.11
TGFB3-204ENST00000556285 C1orf137Q5JT78 98 aa8.11□□□□□ -1.11
TGFB3-204ENST00000556285 ORAOV1Q8WV07 137 aa8.11□□□□□ -1.11
TGFB3-204ENST00000556285 SMIM2Q9BVW6 85 aa8.11□□□□□ -1.11
TGFB3-204ENST00000556285 LINC00862A6NCI5 91 aa8.1□□□□□ -1.11
TGFB3-204ENST00000556285 D6R8Y8 96 aa8.1□□□□□ -1.11
TGFB3-204ENST00000556285 NPYP01303 97 aa8.1□□□□□ -1.11
TGFB3-204ENST00000556285 RPL32P62910 135 aaKnown RBP8.1□□□□□ -1.11
TGFB3-204ENST00000556285 RNF151Q2KHN1 245 aa8.1□□□□□ -1.11
TGFB3-204ENST00000556285 MRPL54Q6P161 138 aaKnown RBP8.1□□□□□ -1.11
TGFB3-204ENST00000556285 OR10D4PQ8NGN7 298 aa8.1□□□□□ -1.11
TGFB3-204ENST00000556285 TMEM18Q96B42 140 aa8.1□□□□□ -1.11
TGFB3-204ENST00000556285 NAT8Q9UHE5 227 aa8.1□□□□□ -1.11
TGFB3-204ENST00000556285 UNQ6190/PRO20217Q6UXQ8 127 aa8.09□□□□□ -1.11
TGFB3-204ENST00000556285 MRPL35Q9NZE8 188 aaKnown RBP8.09□□□□□ -1.11
TGFB3-204ENST00000556285 A0A1B0GVG6 124 aa8.08□□□□□ -1.12
TGFB3-204ENST00000556285 A0A1B0GXF2 115 aa8.08□□□□□ -1.12
TGFB3-204ENST00000556285 KRTAP7-1Q8IUC3 87 aa8.08□□□□□ -1.12
TGFB3-204ENST00000556285 SPANXA1Q9NS26 97 aa8.08□□□□□ -1.12
TGFB3-204ENST00000556285 C6orf48Q9UBA6 75 aa8.08□□□□□ -1.12
TGFB3-204ENST00000556285 A0A1B0GW15 77 aa8.07□□□□□ -1.12
TGFB3-204ENST00000556285 IFITM10A6NMD0 228 aa8.07□□□□□ -1.12
TGFB3-204ENST00000556285 MRPS36P82909 103 aaKnown RBP8.07□□□□□ -1.12
TGFB3-204ENST00000556285 PRR26Q8N8Z3 221 aa8.07□□□□□ -1.12
TGFB3-204ENST00000556285 NDUFA1O15239 70 aa8.06□□□□□ -1.12
TGFB3-204ENST00000556285 IGLV7-43P04211 117 aa8.06□□□□□ -1.12
TGFB3-204ENST00000556285 HBBP68871 147 aa8.06□□□□□ -1.12
TGFB3-204ENST00000556285 KIAA0087Q14695 138 aa8.06□□□□□ -1.12
TGFB3-204ENST00000556285 FAM19A5Q7Z5A7 132 aaPredicted RBP8.06□□□□□ -1.12
TGFB3-204ENST00000556285 A0A087WZ39 114 aa8.05□□□□□ -1.12
TGFB3-204ENST00000556285 GAGE2EQ4V326 116 aa8.05□□□□□ -1.12
TGFB3-204ENST00000556285 IMMP2LQ96T52 175 aa8.05□□□□□ -1.12
TGFB3-204ENST00000556285 GAGE2DQ9UEU5 116 aa8.05□□□□□ -1.12
TGFB3-204ENST00000556285 F8W036 122 aa8.04□□□□□ -1.12
TGFB3-204ENST00000556285 TLX1NBP0CAT3 122 aa8.04□□□□□ -1.12
TGFB3-204ENST00000556285 PEA15Q15121 130 aa8.04□□□□□ -1.12
TGFB3-204ENST00000556285 LINC00242Q5T6M2 205 aa8.04□□□□□ -1.12
TGFB3-204ENST00000556285 C2orf82Q6UX34 121 aa8.04□□□□□ -1.12
TGFB3-204ENST00000556285 IGLV4-3A0A075B6K6 122 aa8.03□□□□□ -1.12
TGFB3-204ENST00000556285 F8WDY8 70 aa8.03□□□□□ -1.12
TGFB3-204ENST00000556285 ZC2HC1BQ5TFG8 222 aa8.03□□□□□ -1.12
TGFB3-204ENST00000556285 DIRC1Q969H9 104 aa8.03□□□□□ -1.12
TGFB3-204ENST00000556285 SMDT1Q9H4I9 107 aa8.03□□□□□ -1.12
TGFB3-204ENST00000556285 TGIF2-C20orf24A0A0A6YYL0 155 aa8.02□□□□□ -1.13
TGFB3-204ENST00000556285 H0Y9J4 135 aa8.02□□□□□ -1.13
TGFB3-204ENST00000556285 PPBPP02775 128 aa8.02□□□□□ -1.13
TGFB3-204ENST00000556285 S100A8P05109 93 aa8.02□□□□□ -1.13
TGFB3-204ENST00000556285 TMEM136Q6ZRR5 245 aa8.02□□□□□ -1.13
TGFB3-204ENST00000556285 ORMDL3Q8N138 153 aa8.02□□□□□ -1.13
TGFB3-204ENST00000556285 PRELID3AQ96N28 172 aa8.02□□□□□ -1.13
TGFB3-204ENST00000556285 MUC2Q02817 5179 aa8.01□□□□□ -1.13
TGFB3-204ENST00000556285 LOC389332A0A1B0GUA5 103 aa8.01□□□□□ -1.13
TGFB3-204ENST00000556285 PYGO1Q9Y3Y4 419 aa8.01□□□□□ -1.13
TGFB3-204ENST00000556285 M0QXV9 152 aa8□□□□□ -1.13
TGFB3-204ENST00000556285 KRTAP1-4P0C5Y4 121 aa8□□□□□ -1.13
TGFB3-204ENST00000556285 RAB5AP20339 215 aa8□□□□□ -1.13
TGFB3-204ENST00000556285 IFI27P40305 119 aaPredicted RBP8□□□□□ -1.13
TGFB3-204ENST00000556285 C9orf129Q5T035 196 aaKnown RBP8□□□□□ -1.13
TGFB3-204ENST00000556285 UBE2D1P51668 147 aa7.99□□□□□ -1.13
TGFB3-204ENST00000556285 LINC00173Q6ZV60 143 aa7.99□□□□□ -1.13
TGFB3-204ENST00000556285 TMEM141Q96I45 108 aa7.99□□□□□ -1.13
TGFB3-204ENST00000556285 TRBV30A0A0K0K1B3 111 aa7.97□□□□□ -1.13
TGFB3-204ENST00000556285 PRSS47A8MTI9 375 aa7.97□□□□□ -1.13
TGFB3-204ENST00000556285 NDUFC2-KCTD14E9PQ53 114 aa7.97□□□□□ -1.13
TGFB3-204ENST00000556285 UBE2BP63146 152 aa7.97□□□□□ -1.13
TGFB3-204ENST00000556285 TEX43Q6ZNM6 134 aa7.97□□□□□ -1.13
TGFB3-204ENST00000556285 ATP5L2Q7Z4Y8 100 aa7.97□□□□□ -1.13
TGFB3-204ENST00000556285 LORP23490 312 aaPredicted RBP7.96□□□□□ -1.14
TGFB3-204ENST00000556285 C2orf66Q6UXQ4 117 aa7.96□□□□□ -1.14
TGFB3-204ENST00000556285 LINC00469Q8N7U9 141 aa7.96□□□□□ -1.14
TGFB3-204ENST00000556285 IGLV1-50A0A075B6I6 118 aa7.95□□□□□ -1.14
TGFB3-204ENST00000556285 Q8N8P6 123 aa7.95□□□□□ -1.14
TGFB3-204ENST00000556285 PACRGQ96M98 296 aaPredicted RBP7.95□□□□□ -1.14
TGFB3-204ENST00000556285 AMELXQ99217 191 aa7.95□□□□□ -1.14
TGFB3-204ENST00000556285 MAP1LC3AQ9H492 121 aa7.95□□□□□ -1.14
TGFB3-204ENST00000556285 TOMM7Q9P0U1 55 aa7.95□□□□□ -1.14
TGFB3-204ENST00000556285 LINC01561Q8N1V8 128 aa7.94□□□□□ -1.14
TGFB3-204ENST00000556285 CYSLTR1Q9Y271 337 aa7.94□□□□□ -1.14
TGFB3-204ENST00000556285 IGIPA6NJ69 53 aa7.93□□□□□ -1.14
TGFB3-204ENST00000556285 C2orf88Q9BSF0 95 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms