RNA–Protein interactions for RNA: ENST00000556017.1

CHMP4BP1-201, Transcript of charged multivesicular body protein 4B pseudogene 1, humanhuman

BASIC

Gene CHMP4BP1, Length 588 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1-201ENST00000556017 A0A087WZ39 114 aa8.59□□□□□ -1.03
CHMP4BP1-201ENST00000556017 ZNF727A8MUV8 499 aa8.59□□□□□ -1.03
CHMP4BP1-201ENST00000556017 PPP1R17O96001 155 aa8.59□□□□□ -1.03
CHMP4BP1-201ENST00000556017 IGLV1-50A0A075B6I6 118 aa8.58□□□□□ -1.04
CHMP4BP1-201ENST00000556017 F8WDY8 70 aa8.58□□□□□ -1.04
CHMP4BP1-201ENST00000556017 PPP1R2P9O14990 202 aa8.58□□□□□ -1.04
CHMP4BP1-201ENST00000556017 MRPS36P82909 103 aaKnown RBP8.58□□□□□ -1.04
CHMP4BP1-201ENST00000556017 FAM19A5Q7Z5A7 132 aaPredicted RBP8.58□□□□□ -1.04
CHMP4BP1-201ENST00000556017 IMMP2LQ96T52 175 aa8.58□□□□□ -1.04
CHMP4BP1-201ENST00000556017 C20orf78Q9BR46 151 aa8.58□□□□□ -1.04
CHMP4BP1-201ENST00000556017 SMDT1Q9H4I9 107 aa8.58□□□□□ -1.04
CHMP4BP1-201ENST00000556017 NDUFA1O15239 70 aa8.57□□□□□ -1.04
CHMP4BP1-201ENST00000556017 RPL23P62829 140 aaKnown RBP8.57□□□□□ -1.04
CHMP4BP1-201ENST00000556017 SMAGPQ0VAQ4 97 aa8.57□□□□□ -1.04
CHMP4BP1-201ENST00000556017 FAM74A3Q4VXF1 159 aa8.57□□□□□ -1.04
CHMP4BP1-201ENST00000556017 C9orf129Q5T035 196 aaKnown RBP8.57□□□□□ -1.04
CHMP4BP1-201ENST00000556017 SMIM27A0A1W2PRY6 76 aa8.56□□□□□ -1.04
CHMP4BP1-201ENST00000556017 LINC00862A6NCI5 91 aa8.56□□□□□ -1.04
CHMP4BP1-201ENST00000556017 C9JQL5 133 aa8.56□□□□□ -1.04
CHMP4BP1-201ENST00000556017 TNFRSF6BO95407 300 aa8.56□□□□□ -1.04
CHMP4BP1-201ENST00000556017 GAGE2EQ4V326 116 aa8.56□□□□□ -1.04
CHMP4BP1-201ENST00000556017 SMIM2Q9BVW6 85 aa8.56□□□□□ -1.04
CHMP4BP1-201ENST00000556017 EIF5A2Q9GZV4 153 aaKnown RBP8.56□□□□□ -1.04
CHMP4BP1-201ENST00000556017 SPANXA1Q9NS26 97 aa8.56□□□□□ -1.04
CHMP4BP1-201ENST00000556017 GAGE2DQ9UEU5 116 aa8.56□□□□□ -1.04
CHMP4BP1-201ENST00000556017 NAT8BQ9UHF3 227 aa8.56□□□□□ -1.04
CHMP4BP1-201ENST00000556017 TMEM241Q24JQ0 296 aa8.55□□□□□ -1.04
CHMP4BP1-201ENST00000556017 TMEM18Q96B42 140 aa8.55□□□□□ -1.04
CHMP4BP1-201ENST00000556017 M0QXV9 152 aa8.54□□□□□ -1.04
CHMP4BP1-201ENST00000556017 TCAPO15273 167 aa8.54□□□□□ -1.04
CHMP4BP1-201ENST00000556017 NPYP01303 97 aa8.54□□□□□ -1.04
CHMP4BP1-201ENST00000556017 LINC00242Q5T6M2 205 aa8.54□□□□□ -1.04
CHMP4BP1-201ENST00000556017 C2orf82Q6UX34 121 aa8.54□□□□□ -1.04
CHMP4BP1-201ENST00000556017 A0A1B0GXF2 115 aa8.53□□□□□ -1.04
CHMP4BP1-201ENST00000556017 IFITM10A6NMD0 228 aa8.53□□□□□ -1.04
CHMP4BP1-201ENST00000556017 D6R8Y8 96 aa8.53□□□□□ -1.04
CHMP4BP1-201ENST00000556017 CKS2P33552 79 aa8.53□□□□□ -1.04
CHMP4BP1-201ENST00000556017 HBBP68871 147 aa8.52□□□□□ -1.05
CHMP4BP1-201ENST00000556017 IGLV4-3A0A075B6K6 122 aa8.51□□□□□ -1.05
CHMP4BP1-201ENST00000556017 KRTAP9-2Q9BYQ4 174 aa8.51□□□□□ -1.05
CHMP4BP1-201ENST00000556017 TRBV30A0A0K0K1B3 111 aa8.5□□□□□ -1.05
CHMP4BP1-201ENST00000556017 NDUFC2-KCTD14E9PQ53 114 aa8.5□□□□□ -1.05
CHMP4BP1-201ENST00000556017 SRSF3P84103 164 aaKnown RBP8.5□□□□□ -1.05
CHMP4BP1-201ENST00000556017 ADIRFQ15847 76 aa8.5□□□□□ -1.05
CHMP4BP1-201ENST00000556017 PRR4Q16378 134 aa8.5□□□□□ -1.05
CHMP4BP1-201ENST00000556017 LCE2AQ5TA79 106 aaPredicted RBP8.5□□□□□ -1.05
CHMP4BP1-201ENST00000556017 ZC2HC1BQ5TFG8 222 aa8.5□□□□□ -1.05
CHMP4BP1-201ENST00000556017 PYGO1Q9Y3Y4 419 aa8.5□□□□□ -1.05
CHMP4BP1-201ENST00000556017 A0A1B0GW15 77 aa8.49□□□□□ -1.05
CHMP4BP1-201ENST00000556017 MRPL54Q6P161 138 aaKnown RBP8.49□□□□□ -1.05
CHMP4BP1-201ENST00000556017 LINC00173Q6ZV60 143 aa8.49□□□□□ -1.05
CHMP4BP1-201ENST00000556017 A0A087X002 238 aa8.48□□□□□ -1.05
CHMP4BP1-201ENST00000556017 TGIF2-C20orf24A0A0A6YYL0 155 aa8.48□□□□□ -1.05
CHMP4BP1-201ENST00000556017 ZNF861PO60384 105 aa8.48□□□□□ -1.05
CHMP4BP1-201ENST00000556017 RPL13AP40429 203 aaKnown RBP8.48□□□□□ -1.05
CHMP4BP1-201ENST00000556017 UBE2D1P51668 147 aa8.48□□□□□ -1.05
CHMP4BP1-201ENST00000556017 UBE2BP63146 152 aa8.48□□□□□ -1.05
CHMP4BP1-201ENST00000556017 AKAP14Q86UN6 197 aa8.48□□□□□ -1.05
CHMP4BP1-201ENST00000556017 NAT8Q9UHE5 227 aa8.48□□□□□ -1.05
CHMP4BP1-201ENST00000556017 CARHSP1Q9Y2V2 147 aaKnown RBP8.48□□□□□ -1.05
CHMP4BP1-201ENST00000556017 MUC17Q685J3 4493 aa8.46□□□□□ -1.05
CHMP4BP1-201ENST00000556017 PRSS47A8MTI9 375 aa8.46□□□□□ -1.06
CHMP4BP1-201ENST00000556017 LINC01561Q8N1V8 128 aa8.46□□□□□ -1.06
CHMP4BP1-201ENST00000556017 PPBPP02775 128 aa8.45□□□□□ -1.06
CHMP4BP1-201ENST00000556017 IFI27P40305 119 aaPredicted RBP8.45□□□□□ -1.06
CHMP4BP1-201ENST00000556017 TMEM141Q96I45 108 aa8.45□□□□□ -1.06
CHMP4BP1-201ENST00000556017 AMELXQ99217 191 aa8.45□□□□□ -1.06
CHMP4BP1-201ENST00000556017 C22orf24Q9Y442 160 aa8.45□□□□□ -1.06
CHMP4BP1-201ENST00000556017 FAT4Q6V0I7 4981 aa8.45□□□□□ -1.06
CHMP4BP1-201ENST00000556017 TMEM136Q6ZRR5 245 aa8.44□□□□□ -1.06
CHMP4BP1-201ENST00000556017 ORMDL3Q8N138 153 aa8.44□□□□□ -1.06
CHMP4BP1-201ENST00000556017 LINC00469Q8N7U9 141 aa8.44□□□□□ -1.06
CHMP4BP1-201ENST00000556017 hCG_2014768A0A024R1R8 64 aa8.43□□□□□ -1.06
CHMP4BP1-201ENST00000556017 F8W036 122 aa8.43□□□□□ -1.06
CHMP4BP1-201ENST00000556017 TSPAN13O95857 204 aa8.43□□□□□ -1.06
CHMP4BP1-201ENST00000556017 FAM19A3Q7Z5A8 133 aa8.43□□□□□ -1.06
CHMP4BP1-201ENST00000556017 PACRGQ96M98 296 aaPredicted RBP8.43□□□□□ -1.06
CHMP4BP1-201ENST00000556017 PRELID3AQ96N28 172 aa8.43□□□□□ -1.06
CHMP4BP1-201ENST00000556017 XAGE1AQ9HD64 81 aa8.43□□□□□ -1.06
CHMP4BP1-201ENST00000556017 CTDSP1Q9GZU7 261 aa8.42□□□□□ -1.06
CHMP4BP1-201ENST00000556017 IGIPA6NJ69 53 aa8.41□□□□□ -1.06
CHMP4BP1-201ENST00000556017 NUPR1O60356 82 aa8.41□□□□□ -1.06
CHMP4BP1-201ENST00000556017 S100A8P05109 93 aa8.41□□□□□ -1.06
CHMP4BP1-201ENST00000556017 C2orf66Q6UXQ4 117 aa8.41□□□□□ -1.06
CHMP4BP1-201ENST00000556017 TEX43Q6ZNM6 134 aa8.41□□□□□ -1.06
CHMP4BP1-201ENST00000556017 RAB5AP20339 215 aa8.4□□□□□ -1.06
CHMP4BP1-201ENST00000556017 KRTAP13-2Q52LG2 175 aa8.4□□□□□ -1.06
CHMP4BP1-201ENST00000556017 Q8IZM0 81 aa8.4□□□□□ -1.06
CHMP4BP1-201ENST00000556017 LOC389332A0A1B0GUA5 103 aa8.39□□□□□ -1.07
CHMP4BP1-201ENST00000556017 Q6ZN92 141 aa8.39□□□□□ -1.07
CHMP4BP1-201ENST00000556017 ATP5L2Q7Z4Y8 100 aa8.39□□□□□ -1.07
CHMP4BP1-201ENST00000556017 ANAPC11Q9NYG5 84 aa8.39□□□□□ -1.07
CHMP4BP1-201ENST00000556017 TP73-AS1Q9UF72 201 aa8.39□□□□□ -1.07
CHMP4BP1-201ENST00000556017 KRTAP13-1Q8IUC0 172 aa8.38□□□□□ -1.07
CHMP4BP1-201ENST00000556017 Q8N8P6 123 aa8.38□□□□□ -1.07
CHMP4BP1-201ENST00000556017 TOMM7Q9P0U1 55 aa8.38□□□□□ -1.07
CHMP4BP1-201ENST00000556017 CDKN2A-AS1Q9UH64 79 aa8.38□□□□□ -1.07
CHMP4BP1-201ENST00000556017 CYSLTR1Q9Y271 337 aa8.38□□□□□ -1.07
CHMP4BP1-201ENST00000556017 BCE1O60756 84 aa8.37□□□□□ -1.07
CHMP4BP1-201ENST00000556017 C6orf226Q5I0X4 101 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms