RNA–Protein interactions for RNA: ENST00000556009.5

NPC2-208, Transcript of NPC intracellular cholesterol transporter 2, humanhuman

TSL 5

Gene NPC2, Length 699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC2-208ENST00000556009 MAJINQ3KP22 176 aa11.13□□□□□ -0.63
NPC2-208ENST00000556009 Q8N8P6 123 aa11.13□□□□□ -0.63
NPC2-208ENST00000556009 OR5A1Q8NGJ0 315 aa11.13□□□□□ -0.63
NPC2-208ENST00000556009 LRP2P98164 4655 aa11.12□□□□□ -0.63
NPC2-208ENST00000556009 TCAPO15273 167 aa11.12□□□□□ -0.63
NPC2-208ENST00000556009 IFI27P40305 119 aaPredicted RBP11.11□□□□□ -0.63
NPC2-208ENST00000556009 STPG4Q8N801 248 aa11.11□□□□□ -0.63
NPC2-208ENST00000556009 NXT2Q9NPJ8 142 aaKnown RBP11.11□□□□□ -0.63
NPC2-208ENST00000556009 LINC00474Q9P2X8 69 aa11.11□□□□□ -0.63
NPC2-208ENST00000556009 IGKV2-24A0A0C4DH68 120 aa11.1□□□□□ -0.63
NPC2-208ENST00000556009 ESDP10768 282 aa11.1□□□□□ -0.63
NPC2-208ENST00000556009 C18orf32Q8TCD1 76 aa11.1□□□□□ -0.63
NPC2-208ENST00000556009 TMEM101Q96IK0 257 aa11.1□□□□□ -0.63
NPC2-208ENST00000556009 LINC01600Q96MT4 127 aa11.1□□□□□ -0.63
NPC2-208ENST00000556009 PKIGQ9Y2B9 76 aa11.1□□□□□ -0.63
NPC2-208ENST00000556009 LINC00959A0A1B0GUT2 108 aa11.09□□□□□ -0.63
NPC2-208ENST00000556009 PRR3P79522 188 aaKnown RBP11.09□□□□□ -0.63
NPC2-208ENST00000556009 A0A096LNI7 61 aa11.08□□□□□ -0.64
NPC2-208ENST00000556009 IGHV1-58A0A0C4DH39 117 aa11.08□□□□□ -0.64
NPC2-208ENST00000556009 XCL1P47992 114 aa11.07□□□□□ -0.64
NPC2-208ENST00000556009 MRPL52Q86TS9 123 aaKnown RBP11.07□□□□□ -0.64
NPC2-208ENST00000556009 CDC42SE2Q9NRR3 84 aa11.07□□□□□ -0.64
NPC2-208ENST00000556009 K7EMI3 77 aa11.06□□□□□ -0.64
NPC2-208ENST00000556009 CCL25O15444 150 aa11.06□□□□□ -0.64
NPC2-208ENST00000556009 FA2HQ7L5A8 372 aa11.06□□□□□ -0.64
NPC2-208ENST00000556009 ODF1Q14990 250 aa11.05□□□□□ -0.64
NPC2-208ENST00000556009 ORMDL2Q53FV1 153 aa11.05□□□□□ -0.64
NPC2-208ENST00000556009 CD164L2Q6UWJ8 174 aa11.05□□□□□ -0.64
NPC2-208ENST00000556009 RNF213Q63HN8 5207 aa11.04□□□□□ -0.64
NPC2-208ENST00000556009 LINC01546A6NGU7 62 aa11.04□□□□□ -0.64
NPC2-208ENST00000556009 SS18Q15532 418 aa11.04□□□□□ -0.64
NPC2-208ENST00000556009 SPINK6Q6UWN8 80 aa11.04□□□□□ -0.64
NPC2-208ENST00000556009 TMEM18Q96B42 140 aa11.04□□□□□ -0.64
NPC2-208ENST00000556009 CARD19Q96LW7 228 aa11.04□□□□□ -0.64
NPC2-208ENST00000556009 LINC00614P0C842 121 aa11.03□□□□□ -0.64
NPC2-208ENST00000556009 RAB5BP61020 215 aa11.03□□□□□ -0.64
NPC2-208ENST00000556009 RPL39P62891 51 aaKnown RBP11.03□□□□□ -0.64
NPC2-208ENST00000556009 ZNF664Q8N3J9 261 aa11.03□□□□□ -0.64
NPC2-208ENST00000556009 URB1-AS1Q96HZ7 61 aa11.03□□□□□ -0.64
NPC2-208ENST00000556009 A0A0J9YXV3 536 aa11.02□□□□□ -0.65
NPC2-208ENST00000556009 SYCNQ0VAF6 134 aa11.02□□□□□ -0.65
NPC2-208ENST00000556009 SRSF9Q13242 221 aaKnown RBP eCLIP11.02□□□□□ -0.65
NPC2-208ENST00000556009 BAGE3Q86Y29 109 aa11.02□□□□□ -0.65
NPC2-208ENST00000556009 LINC00526Q96FQ7 95 aa11.02□□□□□ -0.65
NPC2-208ENST00000556009 ZNF561-AS1K7EIQ3 104 aa11.01□□□□□ -0.65
NPC2-208ENST00000556009 KRTAP10-8P60410 259 aa11.01□□□□□ -0.65
NPC2-208ENST00000556009 SMAGPQ0VAQ4 97 aa11.01□□□□□ -0.65
NPC2-208ENST00000556009 CYSLTR1Q9Y271 337 aa11.01□□□□□ -0.65
NPC2-208ENST00000556009 UBE2D4Q9Y2X8 147 aa11.01□□□□□ -0.65
NPC2-208ENST00000556009 C1orf196B1AJZ1 125 aa11□□□□□ -0.65
NPC2-208ENST00000556009 HIST1H2BKO60814 126 aa11□□□□□ -0.65
NPC2-208ENST00000556009 HIST1H2BJP06899 126 aa11□□□□□ -0.65
NPC2-208ENST00000556009 HIST1H2BOP23527 126 aa11□□□□□ -0.65
NPC2-208ENST00000556009 HIST1H2BBP33778 126 aa11□□□□□ -0.65
NPC2-208ENST00000556009 HIST1H2BDP58876 126 aa11□□□□□ -0.65
NPC2-208ENST00000556009 HIST1H2BCP62807 126 aa11□□□□□ -0.65
NPC2-208ENST00000556009 HIST2H2BEQ16778 126 aa11□□□□□ -0.65
NPC2-208ENST00000556009 HIST2H2BFQ5QNW6 126 aaPredicted RBP11□□□□□ -0.65
NPC2-208ENST00000556009 REG3GQ6UW15 175 aa11□□□□□ -0.65
NPC2-208ENST00000556009 C2orf66Q6UXQ4 117 aa11□□□□□ -0.65
NPC2-208ENST00000556009 Q6ZRP5 223 aa11□□□□□ -0.65
NPC2-208ENST00000556009 HIST1H2BHQ93079 126 aa11□□□□□ -0.65
NPC2-208ENST00000556009 HIST1H2BNQ99877 126 aa11□□□□□ -0.65
NPC2-208ENST00000556009 HIST1H2BMQ99879 126 aa11□□□□□ -0.65
NPC2-208ENST00000556009 TIMM21Q9BVV7 248 aa11□□□□□ -0.65
NPC2-208ENST00000556009 CSDC2Q9Y534 153 aaKnown RBP11□□□□□ -0.65
NPC2-208ENST00000556009 G0S2P27469 103 aa10.99□□□□□ -0.65
NPC2-208ENST00000556009 CHCHD1Q96BP2 118 aaKnown RBP10.99□□□□□ -0.65
NPC2-208ENST00000556009 PTTG1IPP53801 180 aa10.98□□□□□ -0.65
NPC2-208ENST00000556009 TOMM6Q96B49 74 aa10.98□□□□□ -0.65
NPC2-208ENST00000556009 SPANXA1Q9NS26 97 aa10.98□□□□□ -0.65
NPC2-208ENST00000556009 LOC107984640A0A0U1RRK4 108 aa10.97□□□□□ -0.65
NPC2-208ENST00000556009 PMCHL1Q16048 86 aa10.97□□□□□ -0.65
NPC2-208ENST00000556009 IGLV4-69A0A075B6H9 119 aa10.96□□□□□ -0.65
NPC2-208ENST00000556009 COX7A2LO14548 114 aa10.96□□□□□ -0.65
NPC2-208ENST00000556009 SERF1AO75920 110 aa10.96□□□□□ -0.65
NPC2-208ENST00000556009 LINC00310P59036 64 aa10.96□□□□□ -0.65
NPC2-208ENST00000556009 Q6ZUT4 128 aa10.96□□□□□ -0.65
NPC2-208ENST00000556009 PYGO1Q9Y3Y4 419 aa10.96□□□□□ -0.65
NPC2-208ENST00000556009 A0A096LNJ9 63 aa10.95□□□□□ -0.66
NPC2-208ENST00000556009 MALP21145 153 aa10.95□□□□□ -0.66
NPC2-208ENST00000556009 OPRPNQ99935 248 aaPredicted RBP10.95□□□□□ -0.66
NPC2-208ENST00000556009 LINC01549A6NIU2 74 aa10.94□□□□□ -0.66
NPC2-208ENST00000556009 IGIPA6NJ69 53 aa10.94□□□□□ -0.66
NPC2-208ENST00000556009 HSBP1O75506 76 aa10.94□□□□□ -0.66
NPC2-208ENST00000556009 HBDP02042 147 aa10.94□□□□□ -0.66
NPC2-208ENST00000556009 MRPS36P82909 103 aaKnown RBP10.94□□□□□ -0.66
NPC2-208ENST00000556009 RNASE13Q5GAN3 156 aaKnown RBP10.94□□□□□ -0.66
NPC2-208ENST00000556009 FAM104AQ969W3 186 aa10.94□□□□□ -0.66
NPC2-208ENST00000556009 C2orf48Q96LS8 159 aa10.94□□□□□ -0.66
NPC2-208ENST00000556009 SCGB3A1Q96QR1 104 aa10.94□□□□□ -0.66
NPC2-208ENST00000556009 IGLV4-3A0A075B6K6 122 aa10.93□□□□□ -0.66
NPC2-208ENST00000556009 NUPR1O60356 82 aa10.93□□□□□ -0.66
NPC2-208ENST00000556009 GAGE2BQ13066 116 aa10.93□□□□□ -0.66
NPC2-208ENST00000556009 A0A1W2PNN7 141 aa10.92□□□□□ -0.66
NPC2-208ENST00000556009 APOMO95445 188 aa10.92□□□□□ -0.66
NPC2-208ENST00000556009 ERASQ7Z444 233 aa10.92□□□□□ -0.66
NPC2-208ENST00000556009 FAM19A2Q8N3H0 131 aa10.92□□□□□ -0.66
NPC2-208ENST00000556009 TMEM141Q96I45 108 aa10.92□□□□□ -0.66
NPC2-208ENST00000556009 CAMK2N2Q96S95 79 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms