RNA–Protein interactions for RNA: ENST00000555905.5

TMEM260-208, Transcript of transmembrane protein 260, humanhuman

TSL 5

Gene TMEM260, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-208ENST00000555905 GEMIN7Q9H840 131 aaKnown RBP7.44□□□□□ -1.22
TMEM260-208ENST00000555905 MRPL35Q9NZE8 188 aaKnown RBP7.44□□□□□ -1.22
TMEM260-208ENST00000555905 IGLV10-54A0A075B6I4 117 aa7.43□□□□□ -1.22
TMEM260-208ENST00000555905 A0A0J9YXV3 536 aa7.43□□□□□ -1.22
TMEM260-208ENST00000555905 LOC105371267A0A1B0GV96 52 aa7.43□□□□□ -1.22
TMEM260-208ENST00000555905 TINCRA0A1B0GVN0 87 aa7.43□□□□□ -1.22
TMEM260-208ENST00000555905 IGLC3P0DOY3 106 aa7.43□□□□□ -1.22
TMEM260-208ENST00000555905 HERVK_113P63121 156 aa7.43□□□□□ -1.22
TMEM260-208ENST00000555905 CHCHD10Q8WYQ3 142 aaPredicted RBP7.43□□□□□ -1.22
TMEM260-208ENST00000555905 RMI2Q96E14 147 aa7.43□□□□□ -1.22
TMEM260-208ENST00000555905 LYSTQ99698 3801 aa7.43□□□□□ -1.22
TMEM260-208ENST00000555905 Q9HAA7 133 aa7.43□□□□□ -1.22
TMEM260-208ENST00000555905 IGLV4-69A0A075B6H9 119 aa7.42□□□□□ -1.22
TMEM260-208ENST00000555905 IGKCP01834 107 aa7.42□□□□□ -1.22
TMEM260-208ENST00000555905 XCL1P47992 114 aa7.42□□□□□ -1.22
TMEM260-208ENST00000555905 LINC00242Q5T6M2 205 aa7.42□□□□□ -1.22
TMEM260-208ENST00000555905 FAM19A3Q7Z5A8 133 aa7.42□□□□□ -1.22
TMEM260-208ENST00000555905 NFE4Q86UQ8 179 aa7.42□□□□□ -1.22
TMEM260-208ENST00000555905 CHAC1Q9BUX1 264 aa7.42□□□□□ -1.22
TMEM260-208ENST00000555905 C1orf43Q9BWL3 253 aa7.42□□□□□ -1.22
TMEM260-208ENST00000555905 VPS13DQ5THJ4 4388 aa7.42□□□□□ -1.22
TMEM260-208ENST00000555905 IGKV2D-24A0A075B6R9 120 aa7.41□□□□□ -1.22
TMEM260-208ENST00000555905 C11orf86A6NJI1 115 aa7.41□□□□□ -1.22
TMEM260-208ENST00000555905 JOSD1Q15040 202 aaPredicted RBP7.41□□□□□ -1.22
TMEM260-208ENST00000555905 CD164L2Q6UWJ8 174 aa7.41□□□□□ -1.22
TMEM260-208ENST00000555905 LINC00469Q8N7U9 141 aa7.41□□□□□ -1.22
TMEM260-208ENST00000555905 KRTAP1-5Q9BYS1 174 aa7.41□□□□□ -1.22
TMEM260-208ENST00000555905 ALMS1Q8TCU4 4167 aa7.4□□□□□ -1.22
TMEM260-208ENST00000555905 DNAH1Q9P2D7 4330 aa7.4□□□□□ -1.22
TMEM260-208ENST00000555905 H3BRM9 83 aa7.4□□□□□ -1.22
TMEM260-208ENST00000555905 M0R2N4 97 aa7.4□□□□□ -1.22
TMEM260-208ENST00000555905 COX6A2Q02221 97 aa7.4□□□□□ -1.22
TMEM260-208ENST00000555905 TMEM170BQ5T4T1 132 aa7.4□□□□□ -1.22
TMEM260-208ENST00000555905 TM2D2Q9BX73 214 aa7.4□□□□□ -1.22
TMEM260-208ENST00000555905 COX11Q9Y6N1 276 aa7.4□□□□□ -1.22
TMEM260-208ENST00000555905 GAGE12HA6NDE8 117 aa7.39□□□□□ -1.23
TMEM260-208ENST00000555905 COX7A2LO14548 114 aa7.39□□□□□ -1.23
TMEM260-208ENST00000555905 ATOH7Q8N100 152 aa7.39□□□□□ -1.23
TMEM260-208ENST00000555905 IGLV5-45A0A087WSX0 123 aa7.38□□□□□ -1.23
TMEM260-208ENST00000555905 IGHV3OR16-9A0A0B4J2B5 98 aa7.38□□□□□ -1.23
TMEM260-208ENST00000555905 ZNF22P17026 224 aaPredicted RBP7.38□□□□□ -1.23
TMEM260-208ENST00000555905 FOXI1Q12951 378 aa7.38□□□□□ -1.23
TMEM260-208ENST00000555905 CDPF1Q6NVV7 123 aa7.38□□□□□ -1.23
TMEM260-208ENST00000555905 Q6ZR54 194 aa7.38□□□□□ -1.23
TMEM260-208ENST00000555905 CDKN2A-AS1Q9UH64 79 aa7.38□□□□□ -1.23
TMEM260-208ENST00000555905 A0A087WZ39 114 aa7.37□□□□□ -1.23
TMEM260-208ENST00000555905 LCE6AA0A183 80 aa7.37□□□□□ -1.23
TMEM260-208ENST00000555905 HSBP1L1C9JCN9 74 aa7.37□□□□□ -1.23
TMEM260-208ENST00000555905 MALP21145 153 aa7.37□□□□□ -1.23
TMEM260-208ENST00000555905 HERVK_113P61574 105 aa7.37□□□□□ -1.23
TMEM260-208ENST00000555905 PYY3Q5JQD4 70 aa7.37□□□□□ -1.23
TMEM260-208ENST00000555905 C5orf38Q86SI9 138 aa7.37□□□□□ -1.23
TMEM260-208ENST00000555905 PSCAO43653 123 aa7.36□□□□□ -1.23
TMEM260-208ENST00000555905 LINC01561Q8N1V8 128 aa7.36□□□□□ -1.23
TMEM260-208ENST00000555905 TMEM223A0PJW6 202 aa7.35□□□□□ -1.23
TMEM260-208ENST00000555905 APOMO95445 188 aa7.35□□□□□ -1.23
TMEM260-208ENST00000555905 SPINK8P0C7L1 97 aa7.35□□□□□ -1.23
TMEM260-208ENST00000555905 SMIM6P0DI80 62 aa7.35□□□□□ -1.23
TMEM260-208ENST00000555905 C1orf134Q5TEV5 83 aa7.35□□□□□ -1.23
TMEM260-208ENST00000555905 KRTAP26-1Q6PEX3 210 aa7.35□□□□□ -1.23
TMEM260-208ENST00000555905 C6orf223Q8N319 242 aa7.35□□□□□ -1.23
TMEM260-208ENST00000555905 STPG4Q8N801 248 aa7.35□□□□□ -1.23
TMEM260-208ENST00000555905 hDV102S1A0JD36 115 aa7.34□□□□□ -1.23
TMEM260-208ENST00000555905 CFAP161Q6P656 301 aa7.34□□□□□ -1.23
TMEM260-208ENST00000555905 VAMP8Q9BV40 100 aa7.34□□□□□ -1.23
TMEM260-208ENST00000555905 DNAH6Q9C0G6 4158 aa7.34□□□□□ -1.23
TMEM260-208ENST00000555905 IGHV3-64A0A075B6Q5 118 aa7.33□□□□□ -1.24
TMEM260-208ENST00000555905 IGHV1-58A0A0C4DH39 117 aa7.33□□□□□ -1.24
TMEM260-208ENST00000555905 SMIM1B2RUZ4 78 aa7.33□□□□□ -1.24
TMEM260-208ENST00000555905 S100A12P80511 92 aa7.33□□□□□ -1.24
TMEM260-208ENST00000555905 E9PLD3 99 aa7.32□□□□□ -1.24
TMEM260-208ENST00000555905 MAJINQ3KP22 176 aa7.32□□□□□ -1.24
TMEM260-208ENST00000555905 ORAOV1Q8WV07 137 aa7.32□□□□□ -1.24
TMEM260-208ENST00000555905 PLEKHB2Q96CS7 222 aa7.32□□□□□ -1.24
TMEM260-208ENST00000555905 IGLV5-39A0A0G2JS06 123 aa7.31□□□□□ -1.24
TMEM260-208ENST00000555905 LEPROTO15243 131 aa7.31□□□□□ -1.24
TMEM260-208ENST00000555905 PRSS2P07478 247 aa7.31□□□□□ -1.24
TMEM260-208ENST00000555905 Q6ZRN7 208 aaPredicted RBP7.31□□□□□ -1.24
TMEM260-208ENST00000555905 TOMM7Q9P0U1 55 aa7.31□□□□□ -1.24
TMEM260-208ENST00000555905 PAM16Q9Y3D7 125 aa7.31□□□□□ -1.24
TMEM260-208ENST00000555905 USP17L23D6RBM5 183 aa7.3□□□□□ -1.24
TMEM260-208ENST00000555905 LGALS3P17931 250 aaKnown RBP7.3□□□□□ -1.24
TMEM260-208ENST00000555905 NMUP48645 174 aa7.3□□□□□ -1.24
TMEM260-208ENST00000555905 SPATA45Q537H7 98 aa7.3□□□□□ -1.24
TMEM260-208ENST00000555905 ANKRD39Q53RE8 183 aa7.3□□□□□ -1.24
TMEM260-208ENST00000555905 MAPKAPK5-AS1Q8N8E1 139 aa7.3□□□□□ -1.24
TMEM260-208ENST00000555905 COX7B2Q8TF08 81 aa7.3□□□□□ -1.24
TMEM260-208ENST00000555905 KMT2AQ03164 3969 aa7.29□□□□□ -1.24
TMEM260-208ENST00000555905 J3QQQ9 107 aa7.29□□□□□ -1.24
TMEM260-208ENST00000555905 ZNF561-AS1K7EIQ3 104 aa7.29□□□□□ -1.24
TMEM260-208ENST00000555905 SPAG11BQ08648 103 aa7.29□□□□□ -1.24
TMEM260-208ENST00000555905 C14orf177Q52M58 125 aa7.29□□□□□ -1.24
TMEM260-208ENST00000555905 C6orf226Q5I0X4 101 aa7.29□□□□□ -1.24
TMEM260-208ENST00000555905 Q8IZM0 81 aa7.29□□□□□ -1.24
TMEM260-208ENST00000555905 C15orf56Q8N910 161 aa7.29□□□□□ -1.24
TMEM260-208ENST00000555905 GVQW2A0A096LPI5 108 aaPredicted RBP7.28□□□□□ -1.24
TMEM260-208ENST00000555905 IGKV2D-26A0A0A0MRZ7 120 aa7.28□□□□□ -1.24
TMEM260-208ENST00000555905 LECT2O14960 151 aa7.28□□□□□ -1.24
TMEM260-208ENST00000555905 CKS1BP61024 79 aa7.28□□□□□ -1.24
TMEM260-208ENST00000555905 HIGD2BQ4VC39 106 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms