RNA–Protein interactions for RNA: ENST00000555178.5

TDP1-211, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 2,200 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-211ENST00000555178 NFE4Q86UQ8 179 aa7.23□□□□□ -1.25
TDP1-211ENST00000555178 LINC00518Q8N0U6 118 aa7.23□□□□□ -1.25
TDP1-211ENST00000555178 IGHV3-64A0A075B6Q5 118 aa7.23□□□□□ -1.25
TDP1-211ENST00000555178 CCL25O15444 150 aa7.23□□□□□ -1.25
TDP1-211ENST00000555178 PLNP26678 52 aa7.23□□□□□ -1.25
TDP1-211ENST00000555178 ANKRD39Q53RE8 183 aa7.23□□□□□ -1.25
TDP1-211ENST00000555178 TMEM170BQ5T4T1 132 aa7.23□□□□□ -1.25
TDP1-211ENST00000555178 TP73-AS1Q9UF72 201 aa7.23□□□□□ -1.25
TDP1-211ENST00000555178 CDKN2A-AS1Q9UH64 79 aa7.23□□□□□ -1.25
TDP1-211ENST00000555178 FRAS1Q86XX4 4008 aa7.22□□□□□ -1.25
TDP1-211ENST00000555178 TINCRA0A1B0GVN0 87 aa7.22□□□□□ -1.25
TDP1-211ENST00000555178 LINC00469Q8N7U9 141 aa7.22□□□□□ -1.25
TDP1-211ENST00000555178 Q9HAA7 133 aa7.22□□□□□ -1.25
TDP1-211ENST00000555178 CRPP02741 224 aa7.21□□□□□ -1.25
TDP1-211ENST00000555178 CHCHD10Q8WYQ3 142 aaPredicted RBP7.21□□□□□ -1.25
TDP1-211ENST00000555178 GEMIN7Q9H840 131 aaKnown RBP7.21□□□□□ -1.25
TDP1-211ENST00000555178 IGKV2D-26A0A0A0MRZ7 120 aa7.21□□□□□ -1.26
TDP1-211ENST00000555178 SPINK8P0C7L1 97 aa7.21□□□□□ -1.26
TDP1-211ENST00000555178 VAMP8Q9BV40 100 aa7.21□□□□□ -1.26
TDP1-211ENST00000555178 TRAV9-2A0A087WT02 112 aa7.2□□□□□ -1.26
TDP1-211ENST00000555178 TRAV8-3A0A0A6YYJ7 113 aa7.2□□□□□ -1.26
TDP1-211ENST00000555178 FAM19A3Q7Z5A8 133 aa7.2□□□□□ -1.26
TDP1-211ENST00000555178 C5orf38Q86SI9 138 aa7.2□□□□□ -1.26
TDP1-211ENST00000555178 TTTY13Q9BZ97 58 aa7.2□□□□□ -1.26
TDP1-211ENST00000555178 RYR2Q92736 4967 aa7.2□□□□□ -1.26
TDP1-211ENST00000555178 IGHV3OR16-9A0A0B4J2B5 98 aa7.2□□□□□ -1.26
TDP1-211ENST00000555178 SS18Q15532 418 aa7.2□□□□□ -1.26
TDP1-211ENST00000555178 SPATA45Q537H7 98 aa7.2□□□□□ -1.26
TDP1-211ENST00000555178 IGLV5-45A0A087WSX0 123 aa7.19□□□□□ -1.26
TDP1-211ENST00000555178 NBDYA0A0U1RRE5 68 aa7.19□□□□□ -1.26
TDP1-211ENST00000555178 HERVK_113P63121 156 aa7.19□□□□□ -1.26
TDP1-211ENST00000555178 TMEM223A0PJW6 202 aa7.19□□□□□ -1.26
TDP1-211ENST00000555178 GAGE12HA6NDE8 117 aa7.19□□□□□ -1.26
TDP1-211ENST00000555178 IBA57-AS1B1ANH7 110 aa7.19□□□□□ -1.26
TDP1-211ENST00000555178 TSPEAR-AS2P59090 65 aa7.19□□□□□ -1.26
TDP1-211ENST00000555178 FOXI1Q12951 378 aa7.18□□□□□ -1.26
TDP1-211ENST00000555178 KRTAP26-1Q6PEX3 210 aa7.18□□□□□ -1.26
TDP1-211ENST00000555178 Q6ZR54 194 aa7.18□□□□□ -1.26
TDP1-211ENST00000555178 MAPKAPK5-AS1Q8N8E1 139 aa7.18□□□□□ -1.26
TDP1-211ENST00000555178 PRO1933Q9H354 126 aa7.18□□□□□ -1.26
TDP1-211ENST00000555178 IGKV2D-24A0A075B6R9 120 aa7.17□□□□□ -1.26
TDP1-211ENST00000555178 NMUP48645 174 aa7.17□□□□□ -1.26
TDP1-211ENST00000555178 MIAQ16674 131 aa7.17□□□□□ -1.26
TDP1-211ENST00000555178 LCE6AA0A183 80 aa7.17□□□□□ -1.26
TDP1-211ENST00000555178 SMIM1B2RUZ4 78 aa7.17□□□□□ -1.26
TDP1-211ENST00000555178 CD164L2Q6UWJ8 174 aa7.17□□□□□ -1.26
TDP1-211ENST00000555178 RYR3Q15413 4870 aa7.16□□□□□ -1.26
TDP1-211ENST00000555178 HSBP1L1C9JCN9 74 aa7.16□□□□□ -1.26
TDP1-211ENST00000555178 SEC11AP67812 179 aa7.16□□□□□ -1.26
TDP1-211ENST00000555178 S100A12P80511 92 aa7.16□□□□□ -1.26
TDP1-211ENST00000555178 PCP2Q8IVA1 136 aa7.16□□□□□ -1.26
TDP1-211ENST00000555178 C14orf144Q96I85 54 aa7.16□□□□□ -1.26
TDP1-211ENST00000555178 C10orf126Q8N4M7 172 aa7.16□□□□□ -1.26
TDP1-211ENST00000555178 C1orf43Q9BWL3 253 aa7.16□□□□□ -1.26
TDP1-211ENST00000555178 A0A087WZ39 114 aa7.15□□□□□ -1.26
TDP1-211ENST00000555178 E9PLD3 99 aa7.15□□□□□ -1.26
TDP1-211ENST00000555178 TRAV8-4A0A0B4J246 113 aa7.15□□□□□ -1.27
TDP1-211ENST00000555178 H3BRM9 83 aa7.15□□□□□ -1.27
TDP1-211ENST00000555178 COX7A2LO14548 114 aa7.15□□□□□ -1.27
TDP1-211ENST00000555178 IGHV1-58A0A0C4DH39 117 aa7.14□□□□□ -1.27
TDP1-211ENST00000555178 WFDC2Q14508 124 aa7.14□□□□□ -1.27
TDP1-211ENST00000555178 Q6ZRN7 208 aaPredicted RBP7.14□□□□□ -1.27
TDP1-211ENST00000555178 LINC00526Q96FQ7 95 aa7.14□□□□□ -1.27
TDP1-211ENST00000555178 DNAH17Q9UFH2 4485 aa7.13□□□□□ -1.27
TDP1-211ENST00000555178 IGLV5-39A0A0G2JS06 123 aa7.13□□□□□ -1.27
TDP1-211ENST00000555178 HERVK_113P61574 105 aa7.13□□□□□ -1.27
TDP1-211ENST00000555178 TOMM7Q9P0U1 55 aa7.13□□□□□ -1.27
TDP1-211ENST00000555178 LECT2O14960 151 aa7.13□□□□□ -1.27
TDP1-211ENST00000555178 FAT2Q9NYQ8 4349 aa7.12□□□□□ -1.27
TDP1-211ENST00000555178 J3QQQ9 107 aa7.12□□□□□ -1.27
TDP1-211ENST00000555178 MALP21145 153 aa7.12□□□□□ -1.27
TDP1-211ENST00000555178 LEPROTO15243 131 aa7.12□□□□□ -1.27
TDP1-211ENST00000555178 ORAOV1Q8WV07 137 aa7.12□□□□□ -1.27
TDP1-211ENST00000555178 HECTD4Q9Y4D8 3996 aa7.12□□□□□ -1.27
TDP1-211ENST00000555178 HIGD2BQ4VC39 106 aa7.11□□□□□ -1.27
TDP1-211ENST00000555178 TTC32Q5I0X7 151 aa7.11□□□□□ -1.27
TDP1-211ENST00000555178 C15orf56Q8N910 161 aa7.11□□□□□ -1.27
TDP1-211ENST00000555178 RTL8CO15255 209 aa7.11□□□□□ -1.27
TDP1-211ENST00000555178 COX8AP10176 69 aa7.11□□□□□ -1.27
TDP1-211ENST00000555178 FUSP35637 526 aaKnown RBP eCLIP7.11□□□□□ -1.27
TDP1-211ENST00000555178 C6orf223Q8N319 242 aa7.11□□□□□ -1.27
TDP1-211ENST00000555178 K7EP13 123 aa7.1□□□□□ -1.27
TDP1-211ENST00000555178 LGALS3P17931 250 aaKnown RBP7.1□□□□□ -1.27
TDP1-211ENST00000555178 C2orf82Q6UX34 121 aa7.1□□□□□ -1.27
TDP1-211ENST00000555178 COX7B2Q8TF08 81 aa7.1□□□□□ -1.27
TDP1-211ENST00000555178 PLEKHB2Q96CS7 222 aa7.1□□□□□ -1.27
TDP1-211ENST00000555178 PKD1P98161 4303 aa7.1□□□□□ -1.27
TDP1-211ENST00000555178 ZNF815PA8K554 130 aa7.09□□□□□ -1.27
TDP1-211ENST00000555178 KIAA0087Q14695 138 aa7.09□□□□□ -1.27
TDP1-211ENST00000555178 ZNF625Q96I27 306 aaPredicted RBP7.09□□□□□ -1.27
TDP1-211ENST00000555178 PCP4L1A6NKN8 68 aa7.09□□□□□ -1.27
TDP1-211ENST00000555178 BOD1L2Q8IYS8 172 aa7.09□□□□□ -1.27
TDP1-211ENST00000555178 NDUFA12Q9UI09 145 aa7.09□□□□□ -1.27
TDP1-211ENST00000555178 DNAH11Q96DT5 4516 aa7.09□□□□□ -1.27
TDP1-211ENST00000555178 SPAG11BQ08648 103 aa7.08□□□□□ -1.28
TDP1-211ENST00000555178 MYMXA0A1B0GTQ4 84 aa7.08□□□□□ -1.28
TDP1-211ENST00000555178 USP17L23D6RBM5 183 aa7.08□□□□□ -1.28
TDP1-211ENST00000555178 SLC25A34Q6PIV7 304 aa7.08□□□□□ -1.28
TDP1-211ENST00000555178 RMI2Q96E14 147 aa7.08□□□□□ -1.28
TDP1-211ENST00000555178 LRCOL1A6NCL2 159 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms