RNA–Protein interactions for RNA: ENST00000554995.1

PSEN1-211, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 592 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-211ENST00000554995 RYR3Q15413 4870 aa1.99□□□□□ -2.09
PSEN1-211ENST00000554995 IQCF6A8MYZ5 107 aa1.99□□□□□ -2.09
PSEN1-211ENST00000554995 UMAD1C9J7I0 102 aa1.99□□□□□ -2.09
PSEN1-211ENST00000554995 H3BSH0 61 aa1.99□□□□□ -2.09
PSEN1-211ENST00000554995 GEMIN2O14893 280 aaKnown RBP1.99□□□□□ -2.09
PSEN1-211ENST00000554995 CFDP00746 253 aaPredicted RBP1.99□□□□□ -2.09
PSEN1-211ENST00000554995 PPYP01298 95 aa1.99□□□□□ -2.09
PSEN1-211ENST00000554995 RPL35P42766 123 aaKnown RBP1.99□□□□□ -2.09
PSEN1-211ENST00000554995 PLGLB1Q02325 96 aa1.99□□□□□ -2.09
PSEN1-211ENST00000554995 SMCO1Q147U7 214 aa1.99□□□□□ -2.09
PSEN1-211ENST00000554995 HMGN3Q15651 99 aa1.99□□□□□ -2.09
PSEN1-211ENST00000554995 C1orf134Q5TEV5 83 aa1.99□□□□□ -2.09
PSEN1-211ENST00000554995 C6orf201Q7Z4U5 140 aa1.99□□□□□ -2.09
PSEN1-211ENST00000554995 ARL11Q969Q4 196 aa1.99□□□□□ -2.09
PSEN1-211ENST00000554995 PDCD10Q9BUL8 212 aa1.99□□□□□ -2.09
PSEN1-211ENST00000554995 BANF2Q9H503 90 aa1.99□□□□□ -2.09
PSEN1-211ENST00000554995 NAA60Q9H7X0 242 aa1.99□□□□□ -2.09
PSEN1-211ENST00000554995 COA4Q9NYJ1 87 aa1.99□□□□□ -2.09
PSEN1-211ENST00000554995 KLK9Q9UKQ9 250 aa1.99□□□□□ -2.09
PSEN1-211ENST00000554995 ARFGEF3Q5TH69 2177 aa1.99□□□□□ -2.09
PSEN1-211ENST00000554995 NSD1Q96L73 2696 aaPredicted RBP1.98□□□□□ -2.09
PSEN1-211ENST00000554995 BORCS7-ASMTA0A0B4J1R7 106 aa1.98□□□□□ -2.09
PSEN1-211ENST00000554995 A0A1B0GW64 132 aa1.98□□□□□ -2.09
PSEN1-211ENST00000554995 E7EUB6 86 aa1.98□□□□□ -2.09
PSEN1-211ENST00000554995 SIX6O95475 246 aa1.98□□□□□ -2.09
PSEN1-211ENST00000554995 PIGYQ3MUY2 71 aa1.98□□□□□ -2.09
PSEN1-211ENST00000554995 NMSQ5H8A3 153 aa1.98□□□□□ -2.09
PSEN1-211ENST00000554995 ALKAL2Q6UX46 152 aa1.98□□□□□ -2.09
PSEN1-211ENST00000554995 HRCT1Q6UXD1 115 aa1.98□□□□□ -2.09
PSEN1-211ENST00000554995 SLC25A26Q70HW3 274 aa1.98□□□□□ -2.09
PSEN1-211ENST00000554995 Q8N814 137 aa1.98□□□□□ -2.09
PSEN1-211ENST00000554995 ST6GALNAC3Q8NDV1 305 aa1.98□□□□□ -2.09
PSEN1-211ENST00000554995 LSM10Q969L4 123 aaKnown RBP1.98□□□□□ -2.09
PSEN1-211ENST00000554995 SEC11CQ9BY50 192 aa1.98□□□□□ -2.09
PSEN1-211ENST00000554995 SNURFQ9Y675 71 aa1.98□□□□□ -2.09
PSEN1-211ENST00000554995 KMT2CQ8NEZ4 4911 aaKnown RBP1.98□□□□□ -2.09
PSEN1-211ENST00000554995 C3orf85A0A1B0GTC6 90 aa1.97□□□□□ -2.09
PSEN1-211ENST00000554995 TMEM30CPA0ZSE6 113 aa1.97□□□□□ -2.09
PSEN1-211ENST00000554995 IGKV2-29A2NJV5 120 aaPredicted RBP1.97□□□□□ -2.09
PSEN1-211ENST00000554995 TMEM218A2RU14 115 aa1.97□□□□□ -2.09
PSEN1-211ENST00000554995 PITX3O75364 302 aa1.97□□□□□ -2.09
PSEN1-211ENST00000554995 RPL7P18124 248 aaKnown RBP1.97□□□□□ -2.09
PSEN1-211ENST00000554995 SMIM21Q3B7S5 101 aa1.97□□□□□ -2.09
PSEN1-211ENST00000554995 KRTAP21-2Q3LI59 83 aa1.97□□□□□ -2.09
PSEN1-211ENST00000554995 HAGHLQ6PII5 290 aaPredicted RBP1.97□□□□□ -2.09
PSEN1-211ENST00000554995 Q6ZS92 163 aa1.97□□□□□ -2.09
PSEN1-211ENST00000554995 SVBPQ8N300 66 aa1.97□□□□□ -2.09
PSEN1-211ENST00000554995 C4orf3Q8WVX3 66 aa1.97□□□□□ -2.09
PSEN1-211ENST00000554995 TAF9BQ9HBM6 251 aa1.97□□□□□ -2.09
PSEN1-211ENST00000554995 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.96□□□□□ -2.1
PSEN1-211ENST00000554995 TRAV10A0A0B4J240 114 aa1.96□□□□□ -2.1
PSEN1-211ENST00000554995 FABP2P12104 132 aa1.96□□□□□ -2.1
PSEN1-211ENST00000554995 S100A10P60903 97 aa1.96□□□□□ -2.1
PSEN1-211ENST00000554995 SERF2P84101 59 aa1.96□□□□□ -2.1
PSEN1-211ENST00000554995 CATR1Q13166 79 aa1.96□□□□□ -2.1
PSEN1-211ENST00000554995 OR2T2Q6IF00 324 aa1.96□□□□□ -2.1
PSEN1-211ENST00000554995 ZNF436-AS1Q8NC38 126 aaPredicted RBP1.96□□□□□ -2.1
PSEN1-211ENST00000554995 FDCSPQ8NFU4 85 aa1.96□□□□□ -2.1
PSEN1-211ENST00000554995 RAB37Q96AX2 223 aa1.96□□□□□ -2.1
PSEN1-211ENST00000554995 MUCL1Q96DR8 90 aa1.96□□□□□ -2.1
PSEN1-211ENST00000554995 CIB3Q96Q77 187 aaPredicted RBP1.96□□□□□ -2.1
PSEN1-211ENST00000554995 TP53RKQ96S44 253 aa1.96□□□□□ -2.1
PSEN1-211ENST00000554995 SMR3AQ99954 134 aa1.96□□□□□ -2.1
PSEN1-211ENST00000554995 PSMG3Q9BT73 122 aaPredicted RBP1.96□□□□□ -2.1
PSEN1-211ENST00000554995 BIRC6Q9NR09 4857 aa1.96□□□□□ -2.1
PSEN1-211ENST00000554995 HMCN1Q96RW7 5635 aa1.96□□□□□ -2.1
PSEN1-211ENST00000554995 WNK2Q9Y3S1 2297 aa1.96□□□□□ -2.1
PSEN1-211ENST00000554995 CR1P17927 2039 aa1.95□□□□□ -2.1
PSEN1-211ENST00000554995 IGKV3-7A0A075B6H7 116 aa1.95□□□□□ -2.1
PSEN1-211ENST00000554995 IGKV2-40A0A087WW87 121 aaPredicted RBP1.95□□□□□ -2.1
PSEN1-211ENST00000554995 A0A087WWC5 75 aa1.95□□□□□ -2.1
PSEN1-211ENST00000554995 YPEL1O60688 119 aa1.95□□□□□ -2.1
PSEN1-211ENST00000554995 OR2H2O95918 312 aa1.95□□□□□ -2.1
PSEN1-211ENST00000554995 IGKV2D-40P01614 121 aaPredicted RBP1.95□□□□□ -2.1
PSEN1-211ENST00000554995 SCTP09683 121 aa1.95□□□□□ -2.1
PSEN1-211ENST00000554995 FXYD4P59646 89 aa1.95□□□□□ -2.1
PSEN1-211ENST00000554995 PEA15Q15121 130 aa1.95□□□□□ -2.1
PSEN1-211ENST00000554995 DEFB109BQ30KR1 87 aa1.95□□□□□ -2.1
PSEN1-211ENST00000554995 RPL7L1Q6DKI1 246 aaKnown RBP1.95□□□□□ -2.1
PSEN1-211ENST00000554995 C2orf82Q6UX34 121 aa1.95□□□□□ -2.1
PSEN1-211ENST00000554995 ZNF818PQ6ZRF7 136 aa1.95□□□□□ -2.1
PSEN1-211ENST00000554995 FAM216BQ8N7L0 139 aa1.95□□□□□ -2.1
PSEN1-211ENST00000554995 MAFIPQ8WZ33 124 aa1.95□□□□□ -2.1
PSEN1-211ENST00000554995 LINC00052Q96N35 136 aa1.95□□□□□ -2.1
PSEN1-211ENST00000554995 GGACTQ9BVM4 153 aa1.95□□□□□ -2.1
PSEN1-211ENST00000554995 SLC35B3Q9H1N7 401 aa1.95□□□□□ -2.1
PSEN1-211ENST00000554995 GSKIPQ9P0R6 139 aa1.95□□□□□ -2.1
PSEN1-211ENST00000554995 JPT1Q9UK76 154 aa1.95□□□□□ -2.1
PSEN1-211ENST00000554995 TRAPPC2LQ9UL33 140 aa1.95□□□□□ -2.1
PSEN1-211ENST00000554995 ANK2Q01484 3957 aa1.95□□□□□ -2.1
PSEN1-211ENST00000554995 AKAP6Q13023 2319 aa1.94□□□□□ -2.1
PSEN1-211ENST00000554995 A0A087WSZ3 146 aa1.94□□□□□ -2.1
PSEN1-211ENST00000554995 A0A087WX48 190 aa1.94□□□□□ -2.1
PSEN1-211ENST00000554995 OR2T8A6NH00 312 aa1.94□□□□□ -2.1
PSEN1-211ENST00000554995 NDUFA2O43678 99 aa1.94□□□□□ -2.1
PSEN1-211ENST00000554995 ERC2-IT1O76042 136 aa1.94□□□□□ -2.1
PSEN1-211ENST00000554995 APOC3P02656 99 aa1.94□□□□□ -2.1
PSEN1-211ENST00000554995 RBP4P02753 201 aa1.94□□□□□ -2.1
PSEN1-211ENST00000554995 MT-ND6P03923 174 aa1.94□□□□□ -2.1
PSEN1-211ENST00000554995 COX6B1P14854 86 aa1.94□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms