RNA–Protein interactions for RNA: ENST00000554685.2

SHOX2-206, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 439 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-206ENST00000554685 STARD9Q9P2P6 4700 aa9.69□□□□□ -0.86
SHOX2-206ENST00000554685 C11orf86A6NJI1 115 aa9.69□□□□□ -0.86
SHOX2-206ENST00000554685 H3BRM9 83 aa9.69□□□□□ -0.86
SHOX2-206ENST00000554685 LINC00476Q8WZB0 136 aa9.69□□□□□ -0.86
SHOX2-206ENST00000554685 C1orf43Q9BWL3 253 aa9.69□□□□□ -0.86
SHOX2-206ENST00000554685 NBDYA0A0U1RRE5 68 aa9.68□□□□□ -0.86
SHOX2-206ENST00000554685 HSBP1L1C9JCN9 74 aa9.68□□□□□ -0.86
SHOX2-206ENST00000554685 LY6G6CO95867 125 aa9.68□□□□□ -0.86
SHOX2-206ENST00000554685 HERVK_113P61574 105 aa9.68□□□□□ -0.86
SHOX2-206ENST00000554685 TNP2Q05952 138 aa9.68□□□□□ -0.86
SHOX2-206ENST00000554685 TMEM170BQ5T4T1 132 aa9.68□□□□□ -0.86
SHOX2-206ENST00000554685 CD164L2Q6UWJ8 174 aa9.68□□□□□ -0.86
SHOX2-206ENST00000554685 LINC00469Q8N7U9 141 aa9.68□□□□□ -0.86
SHOX2-206ENST00000554685 CHCHD10Q8WYQ3 142 aaPredicted RBP9.68□□□□□ -0.86
SHOX2-206ENST00000554685 COX11Q9Y6N1 276 aa9.68□□□□□ -0.86
SHOX2-206ENST00000554685 IGLV5-45A0A087WSX0 123 aa9.67□□□□□ -0.86
SHOX2-206ENST00000554685 ZNF22P17026 224 aaPredicted RBP9.67□□□□□ -0.86
SHOX2-206ENST00000554685 XCL1P47992 114 aa9.67□□□□□ -0.86
SHOX2-206ENST00000554685 CSMD3Q7Z407 3707 aa9.67□□□□□ -0.86
SHOX2-206ENST00000554685 IGLV10-54A0A075B6I4 117 aa9.66□□□□□ -0.86
SHOX2-206ENST00000554685 IGKV2D-24A0A075B6R9 120 aa9.65□□□□□ -0.86
SHOX2-206ENST00000554685 IGHV3OR16-9A0A0B4J2B5 98 aa9.65□□□□□ -0.86
SHOX2-206ENST00000554685 S100A12P80511 92 aa9.65□□□□□ -0.86
SHOX2-206ENST00000554685 ATOH7Q8N100 152 aa9.65□□□□□ -0.86
SHOX2-206ENST00000554685 LINC01561Q8N1V8 128 aa9.65□□□□□ -0.86
SHOX2-206ENST00000554685 TM2D2Q9BX73 214 aa9.65□□□□□ -0.86
SHOX2-206ENST00000554685 Q9HAA7 133 aa9.65□□□□□ -0.86
SHOX2-206ENST00000554685 CDKN2A-AS1Q9UH64 79 aa9.65□□□□□ -0.86
SHOX2-206ENST00000554685 GAGE12HA6NDE8 117 aa9.64□□□□□ -0.87
SHOX2-206ENST00000554685 COX7A2LO14548 114 aa9.64□□□□□ -0.87
SHOX2-206ENST00000554685 COX6A2Q02221 97 aa9.64□□□□□ -0.87
SHOX2-206ENST00000554685 VAMP8Q9BV40 100 aa9.64□□□□□ -0.87
SHOX2-206ENST00000554685 PLECQ15149 4684 aaKnown RBP9.64□□□□□ -0.87
SHOX2-206ENST00000554685 A0A087WZ39 114 aa9.63□□□□□ -0.87
SHOX2-206ENST00000554685 FOXI1Q12951 378 aa9.63□□□□□ -0.87
SHOX2-206ENST00000554685 TMEM223A0PJW6 202 aa9.62□□□□□ -0.87
SHOX2-206ENST00000554685 APOMO95445 188 aa9.62□□□□□ -0.87
SHOX2-206ENST00000554685 MALP21145 153 aa9.62□□□□□ -0.87
SHOX2-206ENST00000554685 KRTAP1-5Q9BYS1 174 aa9.62□□□□□ -0.87
SHOX2-206ENST00000554685 TENM2Q9NT68 2774 aa9.61□□□□□ -0.87
SHOX2-206ENST00000554685 hDV102S1A0JD36 115 aa9.61□□□□□ -0.87
SHOX2-206ENST00000554685 LORP23490 312 aaPredicted RBP9.61□□□□□ -0.87
SHOX2-206ENST00000554685 C5orf38Q86SI9 138 aa9.61□□□□□ -0.87
SHOX2-206ENST00000554685 E9PLD3 99 aa9.6□□□□□ -0.87
SHOX2-206ENST00000554685 KRTAP26-1Q6PEX3 210 aa9.6□□□□□ -0.87
SHOX2-206ENST00000554685 STPG4Q8N801 248 aa9.6□□□□□ -0.87
SHOX2-206ENST00000554685 PLEKHB2Q96CS7 222 aa9.6□□□□□ -0.87
SHOX2-206ENST00000554685 IGHV1-58A0A0C4DH39 117 aa9.59□□□□□ -0.87
SHOX2-206ENST00000554685 SMIM1B2RUZ4 78 aa9.59□□□□□ -0.87
SHOX2-206ENST00000554685 SPINK8P0C7L1 97 aa9.59□□□□□ -0.87
SHOX2-206ENST00000554685 CFAP161Q6P656 301 aa9.59□□□□□ -0.87
SHOX2-206ENST00000554685 Q6ZR54 194 aa9.59□□□□□ -0.87
SHOX2-206ENST00000554685 PAM16Q9Y3D7 125 aa9.59□□□□□ -0.87
SHOX2-206ENST00000554685 IGLV5-39A0A0G2JS06 123 aa9.58□□□□□ -0.88
SHOX2-206ENST00000554685 M0R2N4 97 aa9.58□□□□□ -0.88
SHOX2-206ENST00000554685 LEPROTO15243 131 aa9.58□□□□□ -0.88
SHOX2-206ENST00000554685 PSCAO43653 123 aa9.58□□□□□ -0.88
SHOX2-206ENST00000554685 SPATA45Q537H7 98 aa9.58□□□□□ -0.88
SHOX2-206ENST00000554685 C12orf57Q99622 126 aa9.58□□□□□ -0.88
SHOX2-206ENST00000554685 IGHV3-64A0A075B6Q5 118 aa9.57□□□□□ -0.88
SHOX2-206ENST00000554685 ANKRD39Q53RE8 183 aa9.57□□□□□ -0.88
SHOX2-206ENST00000554685 CDPF1Q6NVV7 123 aa9.57□□□□□ -0.88
SHOX2-206ENST00000554685 LINC00518Q8N0U6 118 aa9.57□□□□□ -0.88
SHOX2-206ENST00000554685 C6orf223Q8N319 242 aa9.57□□□□□ -0.88
SHOX2-206ENST00000554685 LCE6AA0A183 80 aa9.56□□□□□ -0.88
SHOX2-206ENST00000554685 PRSS2P07478 247 aa9.56□□□□□ -0.88
SHOX2-206ENST00000554685 LGALS3P17931 250 aaKnown RBP9.56□□□□□ -0.88
SHOX2-206ENST00000554685 MAJINQ3KP22 176 aa9.56□□□□□ -0.88
SHOX2-206ENST00000554685 ORAOV1Q8WV07 137 aa9.56□□□□□ -0.88
SHOX2-206ENST00000554685 J3QQQ9 107 aa9.55□□□□□ -0.88
SHOX2-206ENST00000554685 NMUP48645 174 aa9.55□□□□□ -0.88
SHOX2-206ENST00000554685 SFTA2Q6UW10 78 aa9.55□□□□□ -0.88
SHOX2-206ENST00000554685 Q8IZM0 81 aa9.55□□□□□ -0.88
SHOX2-206ENST00000554685 VPS13DQ5THJ4 4388 aa9.54□□□□□ -0.88
SHOX2-206ENST00000554685 ALMS1Q8TCU4 4167 aa9.54□□□□□ -0.88
SHOX2-206ENST00000554685 C1orf134Q5TEV5 83 aa9.54□□□□□ -0.88
SHOX2-206ENST00000554685 COX7B2Q8TF08 81 aa9.54□□□□□ -0.88
SHOX2-206ENST00000554685 TOMM7Q9P0U1 55 aa9.54□□□□□ -0.88
SHOX2-206ENST00000554685 CXCL5P42830 114 aa9.53□□□□□ -0.88
SHOX2-206ENST00000554685 SPAG11BQ08648 103 aa9.53□□□□□ -0.88
SHOX2-206ENST00000554685 C14orf177Q52M58 125 aa9.53□□□□□ -0.88
SHOX2-206ENST00000554685 IGKV2D-26A0A0A0MRZ7 120 aa9.52□□□□□ -0.89
SHOX2-206ENST00000554685 F8WDY8 70 aa9.52□□□□□ -0.89
SHOX2-206ENST00000554685 ZNF561-AS1K7EIQ3 104 aa9.52□□□□□ -0.89
SHOX2-206ENST00000554685 C6orf226Q5I0X4 101 aa9.52□□□□□ -0.89
SHOX2-206ENST00000554685 GVQW2A0A096LPI5 108 aaPredicted RBP9.51□□□□□ -0.89
SHOX2-206ENST00000554685 MYMXA0A1B0GTQ4 84 aa9.51□□□□□ -0.89
SHOX2-206ENST00000554685 USP17L23D6RBM5 183 aa9.51□□□□□ -0.89
SHOX2-206ENST00000554685 COX8AP10176 69 aa9.51□□□□□ -0.89
SHOX2-206ENST00000554685 Q6ZRN7 208 aaPredicted RBP9.51□□□□□ -0.89
SHOX2-206ENST00000554685 C15orf56Q8N910 161 aa9.51□□□□□ -0.89
SHOX2-206ENST00000554685 NDUFA12Q9UI09 145 aa9.51□□□□□ -0.89
SHOX2-206ENST00000554685 ZNF815PA8K554 130 aa9.5□□□□□ -0.89
SHOX2-206ENST00000554685 TSPEAR-AS2P59090 65 aa9.5□□□□□ -0.89
SHOX2-206ENST00000554685 CKS1BP61024 79 aa9.5□□□□□ -0.89
SHOX2-206ENST00000554685 HERV-K104P63124 156 aa9.5□□□□□ -0.89
SHOX2-206ENST00000554685 MAPKAPK5-AS1Q8N8E1 139 aa9.5□□□□□ -0.89
SHOX2-206ENST00000554685 LYSTQ99698 3801 aa9.5□□□□□ -0.89
SHOX2-206ENST00000554685 NDUFA1O15239 70 aa9.49□□□□□ -0.89
SHOX2-206ENST00000554685 DLEU1O43261 78 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms