RNA–Protein interactions for RNA: ENST00000554423.1

IFT43-208, Transcript of intraflagellar transport 43, humanhuman

TSL 3

Gene IFT43, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-208ENST00000554423 ST20-AS1Q8NBB2 130 aa1.07□□□□□ -2.24
IFT43-208ENST00000554423 OR9G4Q8NGQ1 327 aa1.07□□□□□ -2.24
IFT43-208ENST00000554423 ORAOV1Q8WV07 137 aa1.07□□□□□ -2.24
IFT43-208ENST00000554423 C4orf3Q8WVX3 66 aa1.07□□□□□ -2.24
IFT43-208ENST00000554423 TOMM6Q96B49 74 aa1.07□□□□□ -2.24
IFT43-208ENST00000554423 PLEKHB2Q96CS7 222 aa1.07□□□□□ -2.24
IFT43-208ENST00000554423 FAM19A4Q96LR4 140 aa1.07□□□□□ -2.24
IFT43-208ENST00000554423 TIMM17AQ99595 171 aa1.07□□□□□ -2.24
IFT43-208ENST00000554423 MRPL16Q9NX20 251 aaKnown RBP1.07□□□□□ -2.24
IFT43-208ENST00000554423 NHP2Q9NX24 153 aaKnown RBP1.07□□□□□ -2.24
IFT43-208ENST00000554423 CYSLTR1Q9Y271 337 aa1.07□□□□□ -2.24
IFT43-208ENST00000554423 HLA-DRB4X5D2U9 266 aa1.07□□□□□ -2.24
IFT43-208ENST00000554423 CSMD2Q7Z408 3487 aa1.06□□□□□ -2.24
IFT43-208ENST00000554423 ABCA2Q9BZC7 2435 aa1.06□□□□□ -2.24
IFT43-208ENST00000554423 ANKHD1Q8IWZ3 2542 aaKnown RBP1.06□□□□□ -2.24
IFT43-208ENST00000554423 NCOR2Q9Y618 2525 aa1.06□□□□□ -2.24
IFT43-208ENST00000554423 TRBV25-1A0A075B6N4 114 aa1.06□□□□□ -2.24
IFT43-208ENST00000554423 TRGV1A0A0A0MS02 117 aa1.06□□□□□ -2.24
IFT43-208ENST00000554423 TRAV2A0A0B4J234 112 aa1.06□□□□□ -2.24
IFT43-208ENST00000554423 TRAV12-1A0A0B4J245 112 aa1.06□□□□□ -2.24
IFT43-208ENST00000554423 IGKV3OR2-268A0A0C4DH90 116 aa1.06□□□□□ -2.24
IFT43-208ENST00000554423 A0A0J9YXV3 536 aa1.06□□□□□ -2.24
IFT43-208ENST00000554423 MYMXA0A1B0GTQ4 84 aa1.06□□□□□ -2.24
IFT43-208ENST00000554423 C11orf86A6NJI1 115 aa1.06□□□□□ -2.24
IFT43-208ENST00000554423 ZNF815PA8K554 130 aa1.06□□□□□ -2.24
IFT43-208ENST00000554423 H3BMM0 161 aa1.06□□□□□ -2.24
IFT43-208ENST00000554423 H3BRM9 83 aa1.06□□□□□ -2.24
IFT43-208ENST00000554423 H7C2G1 150 aa1.06□□□□□ -2.24
IFT43-208ENST00000554423 I3L3M4 83 aa1.06□□□□□ -2.24
IFT43-208ENST00000554423 J3QKU1 62 aa1.06□□□□□ -2.24
IFT43-208ENST00000554423 M0QY20 66 aa1.06□□□□□ -2.24
IFT43-208ENST00000554423 M0R2P5 195 aa1.06□□□□□ -2.24
IFT43-208ENST00000554423 APOMO95445 188 aa1.06□□□□□ -2.24
IFT43-208ENST00000554423 PPP1R17O96001 155 aa1.06□□□□□ -2.24
IFT43-208ENST00000554423 CRYGDP07320 174 aa1.06□□□□□ -2.24
IFT43-208ENST00000554423 SPINK8P0C7L1 97 aa1.06□□□□□ -2.24
IFT43-208ENST00000554423 P0C880 135 aa1.06□□□□□ -2.24
IFT43-208ENST00000554423 SMIM13P0DJ93 91 aa1.06□□□□□ -2.24
IFT43-208ENST00000554423 LGALS3P17931 250 aaKnown RBP1.06□□□□□ -2.24
IFT43-208ENST00000554423 PLNP26678 52 aa1.06□□□□□ -2.24
IFT43-208ENST00000554423 TSPEAR-AS2P59090 65 aa1.06□□□□□ -2.24
IFT43-208ENST00000554423 NPC2P61916 151 aa1.06□□□□□ -2.24
IFT43-208ENST00000554423 DEFB114Q30KQ6 69 aa1.06□□□□□ -2.24
IFT43-208ENST00000554423 SAMD13Q5VXD3 122 aa1.06□□□□□ -2.24
IFT43-208ENST00000554423 SFTA2Q6UW10 78 aa1.06□□□□□ -2.24
IFT43-208ENST00000554423 AMTNQ6UX39 209 aa1.06□□□□□ -2.24
IFT43-208ENST00000554423 SCGB1D4Q6XE38 83 aa1.06□□□□□ -2.24
IFT43-208ENST00000554423 Q6ZUT4 128 aa1.06□□□□□ -2.24
IFT43-208ENST00000554423 DEFB125Q8N687 156 aa1.06□□□□□ -2.24
IFT43-208ENST00000554423 OR11H2Q8NH07 326 aa1.06□□□□□ -2.24
IFT43-208ENST00000554423 ZNRF2Q8NHG8 242 aa1.06□□□□□ -2.24
IFT43-208ENST00000554423 ODF3Q96PU9 254 aa1.06□□□□□ -2.24
IFT43-208ENST00000554423 C20orf78Q9BR46 151 aa1.06□□□□□ -2.24
IFT43-208ENST00000554423 PRADC1Q9BSG0 188 aa1.06□□□□□ -2.24
IFT43-208ENST00000554423 HHLA3Q9XRX5 114 aa1.06□□□□□ -2.24
IFT43-208ENST00000554423 CBY1Q9Y3M2 126 aa1.06□□□□□ -2.24
IFT43-208ENST00000554423 TSSC4Q9Y5U2 329 aaPredicted RBP1.06□□□□□ -2.24
IFT43-208ENST00000554423 SPCS1Q9Y6A9 102 aa1.06□□□□□ -2.24
IFT43-208ENST00000554423 ABCA1O95477 2261 aa1.06□□□□□ -2.24
IFT43-208ENST00000554423 CEP295Q9C0D2 2601 aa1.06□□□□□ -2.24
IFT43-208ENST00000554423 TLN1Q9Y490 2541 aaKnown RBP1.06□□□□□ -2.24
IFT43-208ENST00000554423 MED13LQ71F56 2210 aa1.05□□□□□ -2.24
IFT43-208ENST00000554423 NBASA2RRP1 2371 aa1.05□□□□□ -2.24
IFT43-208ENST00000554423 CR1P17927 2039 aa1.05□□□□□ -2.24
IFT43-208ENST00000554423 MAP1BP46821 2468 aaKnown RBP1.05□□□□□ -2.24
IFT43-208ENST00000554423 TRBV7-3A0A075B6L6 115 aa1.05□□□□□ -2.24
IFT43-208ENST00000554423 TRGV2A0A075B6R0 118 aa1.05□□□□□ -2.24
IFT43-208ENST00000554423 A0A096LPF7 62 aa1.05□□□□□ -2.24
IFT43-208ENST00000554423 TRAV8-3A0A0A6YYJ7 113 aa1.05□□□□□ -2.24
IFT43-208ENST00000554423 LOC107984156A0A0G2JMH3 177 aa1.05□□□□□ -2.24
IFT43-208ENST00000554423 TRBV6-5A0A0K0K1A5 114 aa1.05□□□□□ -2.24
IFT43-208ENST00000554423 A0A1W2PPM0 123 aa1.05□□□□□ -2.24
IFT43-208ENST00000554423 LINC01549A6NIU2 74 aa1.05□□□□□ -2.24
IFT43-208ENST00000554423 IGIPA6NJ69 53 aa1.05□□□□□ -2.24
IFT43-208ENST00000554423 A8MWV9 139 aa1.05□□□□□ -2.24
IFT43-208ENST00000554423 IGLL5B9A064 214 aa1.05□□□□□ -2.24
IFT43-208ENST00000554423 K7EP34 96 aa1.05□□□□□ -2.24
IFT43-208ENST00000554423 DEFB4AO15263 64 aa1.05□□□□□ -2.24
IFT43-208ENST00000554423 SIVA1O15304 175 aa1.05□□□□□ -2.24
IFT43-208ENST00000554423 IGLV6-57P01721 117 aa1.05□□□□□ -2.24
IFT43-208ENST00000554423 SCGB1C2P0DMR2 95 aa1.05□□□□□ -2.24
IFT43-208ENST00000554423 LINC00694P0DN24 101 aa1.05□□□□□ -2.24
IFT43-208ENST00000554423 FABP2P12104 132 aa1.05□□□□□ -2.24
IFT43-208ENST00000554423 ZNF22P17026 224 aaPredicted RBP1.05□□□□□ -2.24
IFT43-208ENST00000554423 PSMB2P49721 201 aa1.05□□□□□ -2.24
IFT43-208ENST00000554423 POLR2KP53803 58 aaKnown RBP1.05□□□□□ -2.24
IFT43-208ENST00000554423 SEC11AP67812 179 aa1.05□□□□□ -2.24
IFT43-208ENST00000554423 COTL1Q14019 142 aa1.05□□□□□ -2.24
IFT43-208ENST00000554423 PMVKQ15126 192 aa1.05□□□□□ -2.24
IFT43-208ENST00000554423 RHOHQ15669 191 aa1.05□□□□□ -2.24
IFT43-208ENST00000554423 C12orf74Q32Q52 190 aa1.05□□□□□ -2.24
IFT43-208ENST00000554423 CFAP126Q5VTH2 177 aa1.05□□□□□ -2.24
IFT43-208ENST00000554423 CLPSL2Q6UWE3 100 aa1.05□□□□□ -2.24
IFT43-208ENST00000554423 Q6ZTI0 123 aa1.05□□□□□ -2.24
IFT43-208ENST00000554423 GTF2H5Q6ZYL4 71 aa1.05□□□□□ -2.24
IFT43-208ENST00000554423 MUSTN1Q8IVN3 82 aa1.05□□□□□ -2.24
IFT43-208ENST00000554423 ARL17AQ8IVW1 177 aa1.05□□□□□ -2.24
IFT43-208ENST00000554423 C1orf158Q8N1D5 194 aa1.05□□□□□ -2.24
IFT43-208ENST00000554423 Q8N2B8 174 aa1.05□□□□□ -2.24
IFT43-208ENST00000554423 C11orf72Q8NBR9 251 aa1.05□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms