RNA–Protein interactions for RNA: ENST00000554350.5

ATXN3-226, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-226ENST00000554350 H3BRM9 83 aa3.81□□□□□ -1.8
ATXN3-226ENST00000554350 H3BVH4 76 aa3.81□□□□□ -1.8
ATXN3-226ENST00000554350 H7C1H1 209 aa3.81□□□□□ -1.8
ATXN3-226ENST00000554350 PRSS1P07477 247 aa3.81□□□□□ -1.8
ATXN3-226ENST00000554350 FOXI2Q6ZQN5 318 aa3.81□□□□□ -1.8
ATXN3-226ENST00000554350 ERASQ7Z444 233 aa3.81□□□□□ -1.8
ATXN3-226ENST00000554350 CSNK1G2-AS1Q8NCQ2 148 aa3.81□□□□□ -1.8
ATXN3-226ENST00000554350 RASL10AQ92737 203 aa3.81□□□□□ -1.8
ATXN3-226ENST00000554350 C9orf85Q96MD7 179 aa3.81□□□□□ -1.8
ATXN3-226ENST00000554350 LINC00467Q9BRT7 94 aa3.81□□□□□ -1.8
ATXN3-226ENST00000554350 MUC21A0A0G2JKD1 596 aa3.8□□□□□ -1.8
ATXN3-226ENST00000554350 TRBV27A0A0K0K1C4 114 aa3.8□□□□□ -1.8
ATXN3-226ENST00000554350 MUC21A0A140T8X8 626 aa3.8□□□□□ -1.8
ATXN3-226ENST00000554350 F8VRH5 84 aa3.8□□□□□ -1.8
ATXN3-226ENST00000554350 K7EP13 123 aa3.8□□□□□ -1.8
ATXN3-226ENST00000554350 VCYO14598 125 aa3.8□□□□□ -1.8
ATXN3-226ENST00000554350 TAX1BP3O14907 124 aa3.8□□□□□ -1.8
ATXN3-226ENST00000554350 MT1HL1P0DM35 61 aa3.8□□□□□ -1.8
ATXN3-226ENST00000554350 RNASE4P34096 147 aaKnown RBP3.8□□□□□ -1.8
ATXN3-226ENST00000554350 CDKN1BP46527 198 aa3.8□□□□□ -1.8
ATXN3-226ENST00000554350 POLR2KP53803 58 aaKnown RBP3.8□□□□□ -1.8
ATXN3-226ENST00000554350 MUC21Q5SSG8 566 aa3.8□□□□□ -1.8
ATXN3-226ENST00000554350 TMEM141Q96I45 108 aa3.8□□□□□ -1.8
ATXN3-226ENST00000554350 TIMM17AQ99595 171 aa3.8□□□□□ -1.8
ATXN3-226ENST00000554350 IGHV1OR15-1A0A075B7D0 117 aa3.79□□□□□ -1.8
ATXN3-226ENST00000554350 IGHV3-16A0A0C4DH30 117 aa3.79□□□□□ -1.8
ATXN3-226ENST00000554350 CBY3A6NI87 242 aa3.79□□□□□ -1.8
ATXN3-226ENST00000554350 H0Y8G0 127 aa3.79□□□□□ -1.8
ATXN3-226ENST00000554350 GNRH2O43555 120 aa3.79□□□□□ -1.8
ATXN3-226ENST00000554350 ZNF688P0C7X2 276 aa3.79□□□□□ -1.8
ATXN3-226ENST00000554350 GATA1P15976 413 aaPredicted RBP3.79□□□□□ -1.8
ATXN3-226ENST00000554350 CRYBA4P53673 196 aa3.79□□□□□ -1.8
ATXN3-226ENST00000554350 RHOHQ15669 191 aa3.79□□□□□ -1.8
ATXN3-226ENST00000554350 SMIM29Q86T20 159 aa3.79□□□□□ -1.8
ATXN3-226ENST00000554350 SCGB3A1Q96QR1 104 aa3.79□□□□□ -1.8
ATXN3-226ENST00000554350 KIR2DL4Q99706 377 aa3.79□□□□□ -1.8
ATXN3-226ENST00000554350 CYSLTR1Q9Y271 337 aa3.79□□□□□ -1.8
ATXN3-226ENST00000554350 A0A0A0MQY5 61 aa3.78□□□□□ -1.8
ATXN3-226ENST00000554350 SMIM9A6NGZ8 99 aa3.78□□□□□ -1.8
ATXN3-226ENST00000554350 IGIPA6NJ69 53 aa3.78□□□□□ -1.8
ATXN3-226ENST00000554350 E9PLD3 99 aa3.78□□□□□ -1.8
ATXN3-226ENST00000554350 F6UB75 175 aa3.78□□□□□ -1.8
ATXN3-226ENST00000554350 CCL25O15444 150 aa3.78□□□□□ -1.8
ATXN3-226ENST00000554350 DEFB130BP0DP73 79 aa3.78□□□□□ -1.8
ATXN3-226ENST00000554350 DEFB130AP0DP74 79 aa3.78□□□□□ -1.8
ATXN3-226ENST00000554350 ZC2HC1BQ5TFG8 222 aa3.78□□□□□ -1.8
ATXN3-226ENST00000554350 AMTNQ6UX39 209 aa3.78□□□□□ -1.8
ATXN3-226ENST00000554350 C2orf66Q6UXQ4 117 aa3.78□□□□□ -1.8
ATXN3-226ENST00000554350 NFE4Q86UQ8 179 aa3.78□□□□□ -1.8
ATXN3-226ENST00000554350 C14orf178Q8N769 122 aaPredicted RBP3.78□□□□□ -1.8
ATXN3-226ENST00000554350 MRPL35Q9NZE8 188 aaKnown RBP3.78□□□□□ -1.8
ATXN3-226ENST00000554350 CHTOPQ9Y3Y2 248 aaKnown RBP3.78□□□□□ -1.8
ATXN3-226ENST00000554350 TIMM8BQ9Y5J9 83 aaPredicted RBP3.78□□□□□ -1.8
ATXN3-226ENST00000554350 FSIP2Q5CZC0 6907 aa3.77□□□□□ -1.81
ATXN3-226ENST00000554350 TRBV25-1A0A075B6N4 114 aa3.77□□□□□ -1.81
ATXN3-226ENST00000554350 TRAV26-2A0A0B4J265 109 aa3.77□□□□□ -1.81
ATXN3-226ENST00000554350 M0QY20 66 aa3.77□□□□□ -1.81
ATXN3-226ENST00000554350 CRYGDP07320 174 aa3.77□□□□□ -1.81
ATXN3-226ENST00000554350 KRTAP5-9P26371 169 aa3.77□□□□□ -1.81
ATXN3-226ENST00000554350 NMUP48645 174 aa3.77□□□□□ -1.81
ATXN3-226ENST00000554350 FXYD7P58549 80 aa3.77□□□□□ -1.81
ATXN3-226ENST00000554350 VAMP3Q15836 100 aa3.77□□□□□ -1.81
ATXN3-226ENST00000554350 ZFP2Q6ZN57 461 aa3.77□□□□□ -1.81
ATXN3-226ENST00000554350 Q6ZQT7 251 aa3.77□□□□□ -1.81
ATXN3-226ENST00000554350 GTF2H5Q6ZYL4 71 aa3.77□□□□□ -1.81
ATXN3-226ENST00000554350 SVIPQ8NHG7 77 aa3.77□□□□□ -1.81
ATXN3-226ENST00000554350 SPXQ9BT56 116 aa3.77□□□□□ -1.81
ATXN3-226ENST00000554350 TRAV12-3A0A0B4J271 114 aa3.76□□□□□ -1.81
ATXN3-226ENST00000554350 MYMXA0A1B0GTQ4 84 aa3.76□□□□□ -1.81
ATXN3-226ENST00000554350 A0A1B0GWB2 263 aa3.76□□□□□ -1.81
ATXN3-226ENST00000554350 A8MWV9 139 aa3.76□□□□□ -1.81
ATXN3-226ENST00000554350 H3BMM0 161 aa3.76□□□□□ -1.81
ATXN3-226ENST00000554350 PSCAO43653 123 aa3.76□□□□□ -1.81
ATXN3-226ENST00000554350 MGPP08493 103 aa3.76□□□□□ -1.81
ATXN3-226ENST00000554350 SMIM13P0DJ93 91 aa3.76□□□□□ -1.81
ATXN3-226ENST00000554350 KRTAP10-4P60372 401 aaPredicted RBP3.76□□□□□ -1.81
ATXN3-226ENST00000554350 RPL37AP61513 92 aaKnown RBP3.76□□□□□ -1.81
ATXN3-226ENST00000554350 PMVKQ15126 192 aa3.76□□□□□ -1.81
ATXN3-226ENST00000554350 PCP2Q8IVA1 136 aa3.76□□□□□ -1.81
ATXN3-226ENST00000554350 CEND1Q8N111 149 aa3.76□□□□□ -1.81
ATXN3-226ENST00000554350 OR4C5Q8NGB2 326 aa3.76□□□□□ -1.81
ATXN3-226ENST00000554350 OR5A1Q8NGJ0 315 aa3.76□□□□□ -1.81
ATXN3-226ENST00000554350 BAALCQ8WXS3 180 aa3.76□□□□□ -1.81
ATXN3-226ENST00000554350 DNAJC30Q96LL9 226 aa3.76□□□□□ -1.81
ATXN3-226ENST00000554350 UPK3BQ9BT76 320 aa3.76□□□□□ -1.81
ATXN3-226ENST00000554350 CHAC1Q9BUX1 264 aa3.76□□□□□ -1.81
ATXN3-226ENST00000554350 CBY1Q9Y3M2 126 aa3.76□□□□□ -1.81
ATXN3-226ENST00000554350 PYGO1Q9Y3Y4 419 aa3.76□□□□□ -1.81
ATXN3-226ENST00000554350 IGKV2D-26A0A0A0MRZ7 120 aa3.75□□□□□ -1.81
ATXN3-226ENST00000554350 A0A0J9YY99 117 aa3.75□□□□□ -1.81
ATXN3-226ENST00000554350 SDHAF1A6NFY7 115 aa3.75□□□□□ -1.81
ATXN3-226ENST00000554350 GAGE10A6NGK3 116 aa3.75□□□□□ -1.81
ATXN3-226ENST00000554350 C11orf86A6NJI1 115 aa3.75□□□□□ -1.81
ATXN3-226ENST00000554350 I3L3M4 83 aa3.75□□□□□ -1.81
ATXN3-226ENST00000554350 J3KRW8 73 aa3.75□□□□□ -1.81
ATXN3-226ENST00000554350 M0R2P5 195 aa3.75□□□□□ -1.81
ATXN3-226ENST00000554350 CIDEAO60543 219 aa3.75□□□□□ -1.81
ATXN3-226ENST00000554350 ATP5G1P05496 136 aa3.75□□□□□ -1.81
ATXN3-226ENST00000554350 DEFB1P60022 68 aa3.75□□□□□ -1.81
ATXN3-226ENST00000554350 HERVK_113P61574 105 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 114.1 ms