RNA–Protein interactions for RNA: ENST00000554079.1

SIX4-202, Transcript of SIX homeobox 4, humanhuman

TSL 1 (best)

Gene SIX4, Length 2,003 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-202ENST00000554079 Q6ZQT0 140 aa6.73□□□□□ -1.33
SIX4-202ENST00000554079 FAM215AQ9Y5M1 114 aa6.73□□□□□ -1.33
SIX4-202ENST00000554079 K7EQG2 157 aa6.72□□□□□ -1.33
SIX4-202ENST00000554079 DAD1P61803 113 aa6.72□□□□□ -1.33
SIX4-202ENST00000554079 CXCL6P80162 114 aa6.72□□□□□ -1.33
SIX4-202ENST00000554079 BSPH1Q075Z2 132 aa6.72□□□□□ -1.33
SIX4-202ENST00000554079 NREPQ16612 68 aa6.72□□□□□ -1.33
SIX4-202ENST00000554079 Q6ZVQ6 151 aa6.72□□□□□ -1.33
SIX4-202ENST00000554079 Q8N3U1 123 aa6.72□□□□□ -1.33
SIX4-202ENST00000554079 E7EQL1 145 aa6.72□□□□□ -1.33
SIX4-202ENST00000554079 Q1T7F1 81 aa6.72□□□□□ -1.33
SIX4-202ENST00000554079 ZFHX4Q86UP3 3567 aa6.72□□□□□ -1.33
SIX4-202ENST00000554079 PKDREJQ9NTG1 2253 aa6.72□□□□□ -1.33
SIX4-202ENST00000554079 LYNX1G3V0Z9 82 aa6.71□□□□□ -1.33
SIX4-202ENST00000554079 TMEM256-PLSCR3K7ERE1 68 aa6.71□□□□□ -1.33
SIX4-202ENST00000554079 M0R2N4 97 aa6.71□□□□□ -1.33
SIX4-202ENST00000554079 NDUFA4O00483 81 aa6.71□□□□□ -1.33
SIX4-202ENST00000554079 PRYO14603 147 aa6.71□□□□□ -1.33
SIX4-202ENST00000554079 LYNX1P0DP58 116 aa6.71□□□□□ -1.33
SIX4-202ENST00000554079 FUSP35637 526 aaKnown RBP eCLIP6.71□□□□□ -1.33
SIX4-202ENST00000554079 C19orf54Q5BKX5 351 aa6.71□□□□□ -1.33
SIX4-202ENST00000554079 Q6ZSN1 163 aa6.71□□□□□ -1.33
SIX4-202ENST00000554079 ROS1P08922 2347 aa6.71□□□□□ -1.34
SIX4-202ENST00000554079 AKAP13Q12802 2813 aa6.71□□□□□ -1.34
SIX4-202ENST00000554079 IGKV3-7A0A075B6H7 116 aa6.71□□□□□ -1.34
SIX4-202ENST00000554079 Q6ZRP5 223 aa6.71□□□□□ -1.34
SIX4-202ENST00000554079 Q8N814 137 aa6.71□□□□□ -1.34
SIX4-202ENST00000554079 LOC110117498A0A087WWA1 95 aa6.7□□□□□ -1.34
SIX4-202ENST00000554079 A0A096LNT2 108 aa6.7□□□□□ -1.34
SIX4-202ENST00000554079 BBC3Q96PG8 261 aaPredicted RBP6.7□□□□□ -1.34
SIX4-202ENST00000554079 hDV103S1A0JD37 113 aa6.69□□□□□ -1.34
SIX4-202ENST00000554079 HAMPP81172 84 aa6.69□□□□□ -1.34
SIX4-202ENST00000554079 DYNLRB2Q8TF09 96 aa6.69□□□□□ -1.34
SIX4-202ENST00000554079 CEP295Q9C0D2 2601 aa6.69□□□□□ -1.34
SIX4-202ENST00000554079 DGAT2L7PQ6IED9 249 aa6.69□□□□□ -1.34
SIX4-202ENST00000554079 MRPL55Q7Z7F7 128 aaKnown RBP6.69□□□□□ -1.34
SIX4-202ENST00000554079 TRBV10-1A0A0K0K1A3 114 aa6.68□□□□□ -1.34
SIX4-202ENST00000554079 TRBV6-4A0A1B0GX49 114 aa6.68□□□□□ -1.34
SIX4-202ENST00000554079 LINC01560Q8TB33 94 aa6.68□□□□□ -1.34
SIX4-202ENST00000554079 C11orf68Q9H3H3 251 aaKnown RBP6.68□□□□□ -1.34
SIX4-202ENST00000554079 RBM12B-AS1Q9P1G2 102 aa6.68□□□□□ -1.34
SIX4-202ENST00000554079 ACACBO00763 2458 aa6.68□□□□□ -1.34
SIX4-202ENST00000554079 CHD8Q9HCK8 2581 aa6.67□□□□□ -1.34
SIX4-202ENST00000554079 MINOS1-NBL1R4GNA1 71 aa6.67□□□□□ -1.34
SIX4-202ENST00000554079 LAMA5O15230 3695 aa6.67□□□□□ -1.34
SIX4-202ENST00000554079 NANOS2P60321 138 aaKnown RBP6.67□□□□□ -1.34
SIX4-202ENST00000554079 ZNF843Q8N446 348 aa6.67□□□□□ -1.34
SIX4-202ENST00000554079 FDCSPQ8NFU4 85 aa6.67□□□□□ -1.34
SIX4-202ENST00000554079 COX7B2Q8TF08 81 aa6.67□□□□□ -1.34
SIX4-202ENST00000554079 RHPN1-AS1Q9BWJ2 59 aa6.67□□□□□ -1.34
SIX4-202ENST00000554079 DOPEY2Q9Y3R5 2298 aa6.67□□□□□ -1.34
SIX4-202ENST00000554079 LINC00158P58513 81 aa6.66□□□□□ -1.34
SIX4-202ENST00000554079 TPRP12270 2363 aaKnown RBP6.66□□□□□ -1.34
SIX4-202ENST00000554079 SPINK13Q1W4C9 94 aa6.66□□□□□ -1.34
SIX4-202ENST00000554079 C4orf48Q5BLP8 95 aa6.66□□□□□ -1.34
SIX4-202ENST00000554079 BPY2O14599 106 aa6.65□□□□□ -1.35
SIX4-202ENST00000554079 IGKV3-20P01619 116 aa6.65□□□□□ -1.35
SIX4-202ENST00000554079 RP1L1Q8IWN7 2480 aaPredicted RBP6.64□□□□□ -1.35
SIX4-202ENST00000554079 K7EQD1 137 aa6.64□□□□□ -1.35
SIX4-202ENST00000554079 IGHV3-53P01767 116 aa6.64□□□□□ -1.35
SIX4-202ENST00000554079 KTN1-AS1Q86SY8 53 aa6.64□□□□□ -1.35
SIX4-202ENST00000554079 OCR1Q9BZK8 76 aa6.64□□□□□ -1.35
SIX4-202ENST00000554079 PCNX1Q96RV3 2341 aa6.64□□□□□ -1.35
SIX4-202ENST00000554079 MAP1BP46821 2468 aaKnown RBP6.64□□□□□ -1.35
SIX4-202ENST00000554079 ACACAQ13085 2346 aa6.64□□□□□ -1.35
SIX4-202ENST00000554079 C9orf66Q5T8R8 295 aa6.64□□□□□ -1.35
SIX4-202ENST00000554079 NTM-AS1Q6ZSK4 140 aa6.64□□□□□ -1.35
SIX4-202ENST00000554079 IGF2RP11717 2491 aa6.63□□□□□ -1.35
SIX4-202ENST00000554079 SCXQ7RTU7 201 aa6.63□□□□□ -1.35
SIX4-202ENST00000554079 CDC42SE2Q9NRR3 84 aa6.63□□□□□ -1.35
SIX4-202ENST00000554079 GNLYP22749 145 aa6.62□□□□□ -1.35
SIX4-202ENST00000554079 C5orf56Q8N8D9 126 aa6.62□□□□□ -1.35
SIX4-202ENST00000554079 LINC00588Q9Y4M8 146 aa6.62□□□□□ -1.35
SIX4-202ENST00000554079 APC2O95996 2303 aa6.62□□□□□ -1.35
SIX4-202ENST00000554079 TRAV22A0A0B4J277 110 aa6.62□□□□□ -1.35
SIX4-202ENST00000554079 A8MU10 97 aa6.62□□□□□ -1.35
SIX4-202ENST00000554079 PSPHP1O15172 72 aa6.62□□□□□ -1.35
SIX4-202ENST00000554079 CD164L2Q6UWJ8 174 aa6.62□□□□□ -1.35
SIX4-202ENST00000554079 STHQ8IWL8 128 aa6.62□□□□□ -1.35
SIX4-202ENST00000554079 ANKRD11Q6UB99 2663 aaPredicted RBP6.62□□□□□ -1.35
SIX4-202ENST00000554079 LINC01356Q8N9X3 169 aa6.61□□□□□ -1.35
SIX4-202ENST00000554079 HIGD2AQ9BW72 106 aa6.61□□□□□ -1.35
SIX4-202ENST00000554079 USP24Q9UPU5 2620 aa6.61□□□□□ -1.35
SIX4-202ENST00000554079 LRCOL1A6NCL2 159 aa6.6□□□□□ -1.35
SIX4-202ENST00000554079 RNASE1P07998 156 aaKnown RBP6.6□□□□□ -1.35
SIX4-202ENST00000554079 IGFL3Q6UXB1 125 aa6.6□□□□□ -1.35
SIX4-202ENST00000554079 C1orf64Q8NEQ6 169 aa6.6□□□□□ -1.35
SIX4-202ENST00000554079 TOMM7Q9P0U1 55 aa6.6□□□□□ -1.35
SIX4-202ENST00000554079 EPG5Q9HCE0 2579 aa6.6□□□□□ -1.35
SIX4-202ENST00000554079 CACNA1BQ00975 2339 aa6.6□□□□□ -1.35
SIX4-202ENST00000554079 SPTBN1Q01082 2364 aaKnown RBP6.6□□□□□ -1.35
SIX4-202ENST00000554079 KMT2BQ9UMN6 2715 aaPredicted RBP6.6□□□□□ -1.35
SIX4-202ENST00000554079 IGHV3-11P01762 117 aa6.59□□□□□ -1.35
SIX4-202ENST00000554079 ADORA2A-AS1P86434 159 aa6.59□□□□□ -1.35
SIX4-202ENST00000554079 SYCNQ0VAF6 134 aa6.59□□□□□ -1.35
SIX4-202ENST00000554079 C11orf44Q8N8P7 122 aa6.59□□□□□ -1.35
SIX4-202ENST00000554079 C11orf45Q8TAV5 145 aa6.59□□□□□ -1.35
SIX4-202ENST00000554079 M0R378 163 aa6.59□□□□□ -1.36
SIX4-202ENST00000554079 LOC400499M0QZD8 3231 aa6.58□□□□□ -1.36
SIX4-202ENST00000554079 IGKV4-1P06312 121 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms