RNA–Protein interactions for RNA: ENST00000553999.5

HIF1A-206, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 4

Gene HIF1A, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-206ENST00000553999 COMMD7Q86VX2 200 aa13□□□□□ -0.33
HIF1A-206ENST00000553999 C7orf33Q8WU49 177 aa13□□□□□ -0.33
HIF1A-206ENST00000553999 ORAOV1Q8WV07 137 aa13□□□□□ -0.33
HIF1A-206ENST00000553999 CTDSP1Q9GZU7 261 aa13□□□□□ -0.33
HIF1A-206ENST00000553999 IGLV4-3A0A075B6K6 122 aa12.98□□□□□ -0.33
HIF1A-206ENST00000553999 APOMO95445 188 aa12.98□□□□□ -0.33
HIF1A-206ENST00000553999 MRPS36P82909 103 aaKnown RBP12.98□□□□□ -0.33
HIF1A-206ENST00000553999 RPL18AQ02543 176 aaKnown RBP12.98□□□□□ -0.33
HIF1A-206ENST00000553999 UQCC3Q6UW78 93 aa12.98□□□□□ -0.33
HIF1A-206ENST00000553999 Q8N8P6 123 aa12.97□□□□□ -0.33
HIF1A-206ENST00000553999 LAMTOR2Q9Y2Q5 125 aa12.97□□□□□ -0.33
HIF1A-206ENST00000553999 C2orf66Q6UXQ4 117 aa12.96□□□□□ -0.33
HIF1A-206ENST00000553999 TGIF2-C20orf24A0A0A6YYL0 155 aa12.95□□□□□ -0.34
HIF1A-206ENST00000553999 LOC107984640A0A0U1RRK4 108 aa12.95□□□□□ -0.34
HIF1A-206ENST00000553999 PTTG1IPP53801 180 aa12.95□□□□□ -0.34
HIF1A-206ENST00000553999 TMEM141Q96I45 108 aa12.95□□□□□ -0.34
HIF1A-206ENST00000553999 IMMP2LQ96T52 175 aa12.95□□□□□ -0.34
HIF1A-206ENST00000553999 CYSLTR1Q9Y271 337 aa12.95□□□□□ -0.34
HIF1A-206ENST00000553999 IGHV3OR16-9A0A0B4J2B5 98 aa12.94□□□□□ -0.34
HIF1A-206ENST00000553999 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.93□□□□□ -0.34
HIF1A-206ENST00000553999 TEX43Q6ZNM6 134 aa12.93□□□□□ -0.34
HIF1A-206ENST00000553999 C2orf48Q96LS8 159 aa12.93□□□□□ -0.34
HIF1A-206ENST00000553999 PKIGQ9Y2B9 76 aa12.93□□□□□ -0.34
HIF1A-206ENST00000553999 PRSS47A8MTI9 375 aa12.92□□□□□ -0.34
HIF1A-206ENST00000553999 OXTP01178 125 aa12.92□□□□□ -0.34
HIF1A-206ENST00000553999 PRR3P79522 188 aaKnown RBP12.92□□□□□ -0.34
HIF1A-206ENST00000553999 LINC00242Q5T6M2 205 aa12.92□□□□□ -0.34
HIF1A-206ENST00000553999 C10orf25Q5T742 122 aa12.92□□□□□ -0.34
HIF1A-206ENST00000553999 OR10D4PQ8NGN7 298 aa12.92□□□□□ -0.34
HIF1A-206ENST00000553999 LINC00474Q9P2X8 69 aa12.92□□□□□ -0.34
HIF1A-206ENST00000553999 LRP1Q07954 4544 aaKnown RBP12.92□□□□□ -0.34
HIF1A-206ENST00000553999 SEC11CQ9BY50 192 aa12.91□□□□□ -0.34
HIF1A-206ENST00000553999 PYGO1Q9Y3Y4 419 aa12.91□□□□□ -0.34
HIF1A-206ENST00000553999 S100PP25815 95 aa12.9□□□□□ -0.34
HIF1A-206ENST00000553999 ORMDL2Q53FV1 153 aa12.9□□□□□ -0.34
HIF1A-206ENST00000553999 UNQ6190/PRO20217Q6UXQ8 127 aa12.9□□□□□ -0.34
HIF1A-206ENST00000553999 Q6ZN92 141 aa12.9□□□□□ -0.34
HIF1A-206ENST00000553999 LINC00173Q6ZV60 143 aa12.9□□□□□ -0.34
HIF1A-206ENST00000553999 C2orf88Q9BSF0 95 aa12.9□□□□□ -0.34
HIF1A-206ENST00000553999 PKHD1L1Q86WI1 4243 aa12.9□□□□□ -0.34
HIF1A-206ENST00000553999 A0A1W2PNN7 141 aa12.89□□□□□ -0.35
HIF1A-206ENST00000553999 NXT2Q9NPJ8 142 aaKnown RBP12.89□□□□□ -0.35
HIF1A-206ENST00000553999 NDUFA1O15239 70 aa12.88□□□□□ -0.35
HIF1A-206ENST00000553999 UBE2D1P51668 147 aa12.88□□□□□ -0.35
HIF1A-206ENST00000553999 RPS10P5Q9NQ39 176 aa12.88□□□□□ -0.35
HIF1A-206ENST00000553999 C2orf82Q6UX34 121 aa12.87□□□□□ -0.35
HIF1A-206ENST00000553999 VCX2Q9H322 139 aa12.87□□□□□ -0.35
HIF1A-206ENST00000553999 A0A087WZ39 114 aa12.86□□□□□ -0.35
HIF1A-206ENST00000553999 C9orf116Q5BN46 136 aaPredicted RBP12.86□□□□□ -0.35
HIF1A-206ENST00000553999 C6orf48Q9UBA6 75 aa12.86□□□□□ -0.35
HIF1A-206ENST00000553999 GAGE2EQ4V326 116 aa12.85□□□□□ -0.35
HIF1A-206ENST00000553999 TOMM7Q9P0U1 55 aa12.85□□□□□ -0.35
HIF1A-206ENST00000553999 GAGE2DQ9UEU5 116 aa12.85□□□□□ -0.35
HIF1A-206ENST00000553999 FAT3Q8TDW7 4589 aa12.84□□□□□ -0.35
HIF1A-206ENST00000553999 TRAV9-1A0A075B6T8 112 aa12.84□□□□□ -0.35
HIF1A-206ENST00000553999 IGIPA6NJ69 53 aa12.84□□□□□ -0.35
HIF1A-206ENST00000553999 PHF5AQ7RTV0 110 aaKnown RBP12.84□□□□□ -0.35
HIF1A-206ENST00000553999 MRPL35Q9NZE8 188 aaKnown RBP12.84□□□□□ -0.35
HIF1A-206ENST00000553999 FAM168BA1KXE4 195 aa12.83□□□□□ -0.36
HIF1A-206ENST00000553999 AMELXQ99217 191 aa12.83□□□□□ -0.36
HIF1A-206ENST00000553999 FABP9Q0Z7S8 132 aa12.82□□□□□ -0.36
HIF1A-206ENST00000553999 KIAA0087Q14695 138 aa12.82□□□□□ -0.36
HIF1A-206ENST00000553999 FAM19A5Q7Z5A7 132 aaPredicted RBP12.82□□□□□ -0.36
HIF1A-206ENST00000553999 MRPL18Q9H0U6 180 aaKnown RBP12.82□□□□□ -0.36
HIF1A-206ENST00000553999 Q6ZRP5 223 aa12.81□□□□□ -0.36
HIF1A-206ENST00000553999 TOMM6Q96B49 74 aa12.81□□□□□ -0.36
HIF1A-206ENST00000553999 SCGB3A1Q96QR1 104 aa12.81□□□□□ -0.36
HIF1A-206ENST00000553999 ALKBH7Q9BT30 221 aaPredicted RBP12.81□□□□□ -0.36
HIF1A-206ENST00000553999 GNB1LQ9BYB4 327 aa12.81□□□□□ -0.36
HIF1A-206ENST00000553999 MT1HL1P0DM35 61 aa12.8□□□□□ -0.36
HIF1A-206ENST00000553999 RNF151Q2KHN1 245 aa12.8□□□□□ -0.36
HIF1A-206ENST00000553999 K7EMI3 77 aa12.79□□□□□ -0.36
HIF1A-206ENST00000553999 PRSS2P07478 247 aa12.79□□□□□ -0.36
HIF1A-206ENST00000553999 RHEBQ15382 184 aa12.79□□□□□ -0.36
HIF1A-206ENST00000553999 CARHSP1Q9Y2V2 147 aaKnown RBP12.79□□□□□ -0.36
HIF1A-206ENST00000553999 C10orf91Q5T1B1 145 aa12.78□□□□□ -0.36
HIF1A-206ENST00000553999 GEMIN7Q9H840 131 aaKnown RBP12.78□□□□□ -0.36
HIF1A-206ENST00000553999 CDKN2A-AS1Q9UH64 79 aa12.78□□□□□ -0.36
HIF1A-206ENST00000553999 APOC3P02656 99 aa12.77□□□□□ -0.37
HIF1A-206ENST00000553999 MT-ND6P03923 174 aa12.77□□□□□ -0.37
HIF1A-206ENST00000553999 ODF1Q14990 250 aa12.77□□□□□ -0.37
HIF1A-206ENST00000553999 FA2HQ7L5A8 372 aa12.77□□□□□ -0.37
HIF1A-206ENST00000553999 PACRGQ96M98 296 aaPredicted RBP12.77□□□□□ -0.37
HIF1A-206ENST00000553999 TIMM17AQ99595 171 aa12.77□□□□□ -0.37
HIF1A-206ENST00000553999 F8WDY8 70 aa12.76□□□□□ -0.37
HIF1A-206ENST00000553999 SMCO4Q9NRQ5 59 aa12.76□□□□□ -0.37
HIF1A-206ENST00000553999 PSORS1C2Q9UIG4 136 aa12.76□□□□□ -0.37
HIF1A-206ENST00000553999 CKS1BP61024 79 aa12.75□□□□□ -0.37
HIF1A-206ENST00000553999 PAPPA-AS1Q5QFB9 102 aa12.75□□□□□ -0.37
HIF1A-206ENST00000553999 LINC00469Q8N7U9 141 aa12.75□□□□□ -0.37
HIF1A-206ENST00000553999 G0S2P27469 103 aa12.74□□□□□ -0.37
HIF1A-206ENST00000553999 HERVK_113P63121 156 aa12.74□□□□□ -0.37
HIF1A-206ENST00000553999 C6orf226Q5I0X4 101 aa12.74□□□□□ -0.37
HIF1A-206ENST00000553999 C1orf137Q5JT78 98 aa12.74□□□□□ -0.37
HIF1A-206ENST00000553999 ERASQ7Z444 233 aa12.74□□□□□ -0.37
HIF1A-206ENST00000553999 NPSP0C0P6 89 aa12.73□□□□□ -0.37
HIF1A-206ENST00000553999 COX19Q49B96 90 aa12.73□□□□□ -0.37
HIF1A-206ENST00000553999 SERTAD4-AS1Q5TG53 156 aa12.73□□□□□ -0.37
HIF1A-206ENST00000553999 KRTAP11-1Q8IUC1 163 aa12.73□□□□□ -0.37
HIF1A-206ENST00000553999 TRBV30A0A0K0K1B3 111 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 150.8 ms