RNA–Protein interactions for RNA: ENST00000553981.1

SLIRP-202, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-202ENST00000553981 VPREB1P12018 145 aa1.79□□□□□ -2.12
SLIRP-202ENST00000553981 AKR1C3P42330 323 aa1.79□□□□□ -2.12
SLIRP-202ENST00000553981 SULT1A2P50226 295 aa1.79□□□□□ -2.12
SLIRP-202ENST00000553981 UBE2G1P62253 170 aa1.79□□□□□ -2.12
SLIRP-202ENST00000553981 CACNG7P62955 275 aa1.79□□□□□ -2.12
SLIRP-202ENST00000553981 TMEM97Q5BJF2 176 aa1.79□□□□□ -2.12
SLIRP-202ENST00000553981 C9orf129Q5T035 196 aaKnown RBP1.79□□□□□ -2.12
SLIRP-202ENST00000553981 CST9LP1Q5W188 147 aa1.79□□□□□ -2.12
SLIRP-202ENST00000553981 C5orf38Q86SI9 138 aa1.79□□□□□ -2.12
SLIRP-202ENST00000553981 BAGE2Q86Y30 109 aa1.79□□□□□ -2.12
SLIRP-202ENST00000553981 FER1L6-AS1Q8NA97 138 aa1.79□□□□□ -2.12
SLIRP-202ENST00000553981 MBD3L1Q8WWY6 194 aa1.79□□□□□ -2.12
SLIRP-202ENST00000553981 MAP1LC3BQ9GZQ8 125 aa1.79□□□□□ -2.12
SLIRP-202ENST00000553981 C6orf48Q9UBA6 75 aa1.79□□□□□ -2.12
SLIRP-202ENST00000553981 FLGP20930 4061 aaPredicted RBP1.78□□□□□ -2.12
SLIRP-202ENST00000553981 FSIP2Q5CZC0 6907 aa1.78□□□□□ -2.12
SLIRP-202ENST00000553981 IGLV1-50A0A075B6I6 118 aa1.78□□□□□ -2.12
SLIRP-202ENST00000553981 LOC107984640A0A0U1RRK4 108 aa1.78□□□□□ -2.12
SLIRP-202ENST00000553981 SSNA1O43805 119 aa1.78□□□□□ -2.12
SLIRP-202ENST00000553981 RPL35P42766 123 aaKnown RBP1.78□□□□□ -2.12
SLIRP-202ENST00000553981 POLR2KP53803 58 aaKnown RBP1.78□□□□□ -2.12
SLIRP-202ENST00000553981 MT1HP80294 61 aa1.78□□□□□ -2.12
SLIRP-202ENST00000553981 COTL1Q14019 142 aa1.78□□□□□ -2.12
SLIRP-202ENST00000553981 KIAA0087Q14695 138 aa1.78□□□□□ -2.12
SLIRP-202ENST00000553981 LBHQ53QV2 105 aaPredicted RBP1.78□□□□□ -2.12
SLIRP-202ENST00000553981 CENPWQ5EE01 88 aa1.78□□□□□ -2.12
SLIRP-202ENST00000553981 RNASEKQ6P5S7 137 aaKnown RBP1.78□□□□□ -2.12
SLIRP-202ENST00000553981 CD164L2Q6UWJ8 174 aa1.78□□□□□ -2.12
SLIRP-202ENST00000553981 UNQ6190/PRO20217Q6UXQ8 127 aa1.78□□□□□ -2.12
SLIRP-202ENST00000553981 Q6ZUT4 128 aa1.78□□□□□ -2.12
SLIRP-202ENST00000553981 TMUB2Q71RG4 321 aa1.78□□□□□ -2.12
SLIRP-202ENST00000553981 FAM19A5Q7Z5A7 132 aaPredicted RBP1.78□□□□□ -2.12
SLIRP-202ENST00000553981 OR2D3Q8NGH3 330 aa1.78□□□□□ -2.12
SLIRP-202ENST00000553981 ENKURQ8TC29 256 aa1.78□□□□□ -2.12
SLIRP-202ENST00000553981 C11orf52Q96A22 123 aa1.78□□□□□ -2.12
SLIRP-202ENST00000553981 FAM218AQ96MZ4 157 aa1.78□□□□□ -2.12
SLIRP-202ENST00000553981 AP1S3Q96PC3 154 aa1.78□□□□□ -2.12
SLIRP-202ENST00000553981 TPPP3Q9BW30 176 aa1.78□□□□□ -2.12
SLIRP-202ENST00000553981 TMEM242Q9NWH2 141 aa1.78□□□□□ -2.12
SLIRP-202ENST00000553981 A0A087WZ39 114 aa1.77□□□□□ -2.13
SLIRP-202ENST00000553981 SDHAF1A6NFY7 115 aa1.77□□□□□ -2.13
SLIRP-202ENST00000553981 SMKR1H3BMG3 65 aa1.77□□□□□ -2.13
SLIRP-202ENST00000553981 KRTAP5-8O75690 187 aa1.77□□□□□ -2.13
SLIRP-202ENST00000553981 APOMO95445 188 aa1.77□□□□□ -2.13
SLIRP-202ENST00000553981 MBP02144 154 aa1.77□□□□□ -2.13
SLIRP-202ENST00000553981 CTRLP40313 264 aa1.77□□□□□ -2.13
SLIRP-202ENST00000553981 PKIAP61925 76 aa1.77□□□□□ -2.13
SLIRP-202ENST00000553981 RPL18AQ02543 176 aaKnown RBP1.77□□□□□ -2.13
SLIRP-202ENST00000553981 LINC00242Q5T6M2 205 aa1.77□□□□□ -2.13
SLIRP-202ENST00000553981 Q6ZVH6 145 aa1.77□□□□□ -2.13
SLIRP-202ENST00000553981 C9orf62Q8N4C0 152 aa1.77□□□□□ -2.13
SLIRP-202ENST00000553981 DIRC1Q969H9 104 aa1.77□□□□□ -2.13
SLIRP-202ENST00000553981 CNFNQ9BYD5 112 aa1.77□□□□□ -2.13
SLIRP-202ENST00000553981 MED28Q9H204 178 aa1.77□□□□□ -2.13
SLIRP-202ENST00000553981 UBE2D4Q9Y2X8 147 aa1.77□□□□□ -2.13
SLIRP-202ENST00000553981 SSPOA2VEC9 5147 aa1.76□□□□□ -2.13
SLIRP-202ENST00000553981 FXYD6-FXYD2A0A087WZ82 144 aa1.76□□□□□ -2.13
SLIRP-202ENST00000553981 IGHV3OR16-9A0A0B4J2B5 98 aa1.76□□□□□ -2.13
SLIRP-202ENST00000553981 TRBV6-5A0A0K0K1A5 114 aa1.76□□□□□ -2.13
SLIRP-202ENST00000553981 UBE2L6O14933 153 aa1.76□□□□□ -2.13
SLIRP-202ENST00000553981 ZNF861PO60384 105 aa1.76□□□□□ -2.13
SLIRP-202ENST00000553981 NCR2O95944 276 aa1.76□□□□□ -2.13
SLIRP-202ENST00000553981 TLX1NBP0CAT3 122 aa1.76□□□□□ -2.13
SLIRP-202ENST00000553981 PET100P0DJ07 73 aa1.76□□□□□ -2.13
SLIRP-202ENST00000553981 SMIM17P0DL12 118 aa1.76□□□□□ -2.13
SLIRP-202ENST00000553981 RAB4AP20338 218 aa1.76□□□□□ -2.13
SLIRP-202ENST00000553981 RPL39P62891 51 aaKnown RBP1.76□□□□□ -2.13
SLIRP-202ENST00000553981 SPAG11BQ08648 103 aa1.76□□□□□ -2.13
SLIRP-202ENST00000553981 TPRXLQ17RH7 258 aa1.76□□□□□ -2.13
SLIRP-202ENST00000553981 AKR1C8PQ5T2L2 129 aa1.76□□□□□ -2.13
SLIRP-202ENST00000553981 C2orf82Q6UX34 121 aa1.76□□□□□ -2.13
SLIRP-202ENST00000553981 MRPL52Q86TS9 123 aaKnown RBP1.76□□□□□ -2.13
SLIRP-202ENST00000553981 KRTAP13-1Q8IUC0 172 aa1.76□□□□□ -2.13
SLIRP-202ENST00000553981 C3orf22Q8N5N4 141 aa1.76□□□□□ -2.13
SLIRP-202ENST00000553981 OCC1Q8TAD7 63 aa1.76□□□□□ -2.13
SLIRP-202ENST00000553981 STOML3Q8TAV4 291 aa1.76□□□□□ -2.13
SLIRP-202ENST00000553981 C2orf48Q96LS8 159 aa1.76□□□□□ -2.13
SLIRP-202ENST00000553981 CAMK2N2Q96S95 79 aa1.76□□□□□ -2.13
SLIRP-202ENST00000553981 NKX6-2Q9C056 277 aaPredicted RBP1.76□□□□□ -2.13
SLIRP-202ENST00000553981 LINC00474Q9P2X8 69 aa1.76□□□□□ -2.13
SLIRP-202ENST00000553981 TRAV13-1A0A0B4J241 112 aa1.75□□□□□ -2.13
SLIRP-202ENST00000553981 A0A0U1RQV1 116 aa1.75□□□□□ -2.13
SLIRP-202ENST00000553981 I3L3M4 83 aa1.75□□□□□ -2.13
SLIRP-202ENST00000553981 M0QXV9 152 aa1.75□□□□□ -2.13
SLIRP-202ENST00000553981 ARPC5O15511 151 aa1.75□□□□□ -2.13
SLIRP-202ENST00000553981 SCO1O75880 301 aa1.75□□□□□ -2.13
SLIRP-202ENST00000553981 APCSP02743 223 aa1.75□□□□□ -2.13
SLIRP-202ENST00000553981 GIPP09681 153 aaPredicted RBP1.75□□□□□ -2.13
SLIRP-202ENST00000553981 PMCHP20382 165 aa1.75□□□□□ -2.13
SLIRP-202ENST00000553981 AMMECR1LQ6DCA0 310 aa1.75□□□□□ -2.13
SLIRP-202ENST00000553981 AMN1Q8IY45 258 aa1.75□□□□□ -2.13
SLIRP-202ENST00000553981 KCNRGQ8N5I3 272 aa1.75□□□□□ -2.13
SLIRP-202ENST00000553981 LINC00469Q8N7U9 141 aa1.75□□□□□ -2.13
SLIRP-202ENST00000553981 Q8NDZ9 215 aa1.75□□□□□ -2.13
SLIRP-202ENST00000553981 FAM213BQ8TBF2 198 aa1.75□□□□□ -2.13
SLIRP-202ENST00000553981 SFT2D1Q8WV19 159 aa1.75□□□□□ -2.13
SLIRP-202ENST00000553981 SMDT1Q9H4I9 107 aa1.75□□□□□ -2.13
SLIRP-202ENST00000553981 BATF3Q9NR55 127 aa1.75□□□□□ -2.13
SLIRP-202ENST00000553981 MRPL35Q9NZE8 188 aaKnown RBP1.75□□□□□ -2.13
SLIRP-202ENST00000553981 CARHSP1Q9Y2V2 147 aaKnown RBP1.75□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms