RNA–Protein interactions for RNA: ENST00000553693.5

SCFD1-210, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-210ENST00000553693 RNASE10Q5GAN6 216 aaKnown RBP1.35□□□□□ -2.19
SCFD1-210ENST00000553693 SAMD13Q5VXD3 122 aa1.35□□□□□ -2.19
SCFD1-210ENST00000553693 ARPINQ7Z6K5 226 aa1.35□□□□□ -2.19
SCFD1-210ENST00000553693 FAM223AQ8IWN6 122 aa1.35□□□□□ -2.19
SCFD1-210ENST00000553693 OR2T35Q8NGX2 323 aa1.35□□□□□ -2.19
SCFD1-210ENST00000553693 TMEM254Q8TBM7 123 aa1.35□□□□□ -2.19
SCFD1-210ENST00000553693 PLEKHB2Q96CS7 222 aa1.35□□□□□ -2.19
SCFD1-210ENST00000553693 MRPL32Q9BYC8 188 aaKnown RBP1.35□□□□□ -2.19
SCFD1-210ENST00000553693 BATF3Q9NR55 127 aa1.35□□□□□ -2.19
SCFD1-210ENST00000553693 A0A1B0GW64 132 aa1.34□□□□□ -2.19
SCFD1-210ENST00000553693 MCRIP1C9JLW8 97 aa1.34□□□□□ -2.19
SCFD1-210ENST00000553693 E7EUB6 86 aa1.34□□□□□ -2.19
SCFD1-210ENST00000553693 EDF1O60869 148 aaKnown RBP1.34□□□□□ -2.19
SCFD1-210ENST00000553693 SULT1C4O75897 302 aa1.34□□□□□ -2.19
SCFD1-210ENST00000553693 HMGN1P05114 100 aa1.34□□□□□ -2.19
SCFD1-210ENST00000553693 COX4I1P13073 169 aa1.34□□□□□ -2.19
SCFD1-210ENST00000553693 HTN3P15516 51 aa1.34□□□□□ -2.19
SCFD1-210ENST00000553693 ASIPP42127 132 aa1.34□□□□□ -2.19
SCFD1-210ENST00000553693 DEFB131AP59861 70 aa1.34□□□□□ -2.19
SCFD1-210ENST00000553693 MPV17LQ2QL34 196 aa1.34□□□□□ -2.19
SCFD1-210ENST00000553693 C10orf55Q5SWW7 151 aa1.34□□□□□ -2.19
SCFD1-210ENST00000553693 TMEM244Q5VVB8 128 aa1.34□□□□□ -2.19
SCFD1-210ENST00000553693 SOSTDC1Q6X4U4 206 aa1.34□□□□□ -2.19
SCFD1-210ENST00000553693 IDO2Q6ZQW0 420 aa1.34□□□□□ -2.19
SCFD1-210ENST00000553693 FP248Q71RG6 208 aaPredicted RBP1.34□□□□□ -2.19
SCFD1-210ENST00000553693 EXOC3-AS1Q8N2X6 119 aa1.34□□□□□ -2.19
SCFD1-210ENST00000553693 TTC9CQ8N5M4 171 aa1.34□□□□□ -2.19
SCFD1-210ENST00000553693 OR5D14Q8NGL3 314 aa1.34□□□□□ -2.19
SCFD1-210ENST00000553693 NAA38Q9BRA0 125 aaKnown RBP1.34□□□□□ -2.19
SCFD1-210ENST00000553693 GNG8Q9UK08 70 aa1.34□□□□□ -2.19
SCFD1-210ENST00000553693 JPT1Q9UK76 154 aa1.34□□□□□ -2.19
SCFD1-210ENST00000553693 SNURFQ9Y675 71 aa1.34□□□□□ -2.19
SCFD1-210ENST00000553693 FAT4Q6V0I7 4981 aa1.34□□□□□ -2.2
SCFD1-210ENST00000553693 TRBV7-1A0A0A6YYK4 115 aa1.33□□□□□ -2.2
SCFD1-210ENST00000553693 TRAV3A0A0B4J244 114 aa1.33□□□□□ -2.2
SCFD1-210ENST00000553693 TRBV6-5A0A0K0K1A5 114 aa1.33□□□□□ -2.2
SCFD1-210ENST00000553693 C17orf112F2Z3M2 114 aa1.33□□□□□ -2.2
SCFD1-210ENST00000553693 MRPS14O60783 128 aaKnown RBP1.33□□□□□ -2.2
SCFD1-210ENST00000553693 HIST1H2BKO60814 126 aa1.33□□□□□ -2.2
SCFD1-210ENST00000553693 HIST1H2BJP06899 126 aa1.33□□□□□ -2.2
SCFD1-210ENST00000553693 OR10J4P0C629 311 aa1.33□□□□□ -2.2
SCFD1-210ENST00000553693 SPART-AS1P0CW21 52 aa1.33□□□□□ -2.2
SCFD1-210ENST00000553693 ZNF846Q147U1 533 aa1.33□□□□□ -2.2
SCFD1-210ENST00000553693 HMGN3Q15651 99 aa1.33□□□□□ -2.2
SCFD1-210ENST00000553693 Q1T7F1 81 aa1.33□□□□□ -2.2
SCFD1-210ENST00000553693 KLK9Q2XQG4 91 aa1.33□□□□□ -2.2
SCFD1-210ENST00000553693 TMEM128Q5BJH2 165 aa1.33□□□□□ -2.2
SCFD1-210ENST00000553693 C2orf82Q6UX34 121 aa1.33□□□□□ -2.2
SCFD1-210ENST00000553693 Q6ZRN7 208 aaPredicted RBP1.33□□□□□ -2.2
SCFD1-210ENST00000553693 C15orf53Q8NAA6 179 aa1.33□□□□□ -2.2
SCFD1-210ENST00000553693 ZNF431Q8TF32 576 aaPredicted RBP1.33□□□□□ -2.2
SCFD1-210ENST00000553693 DEFB104AQ8WTQ1 72 aa1.33□□□□□ -2.2
SCFD1-210ENST00000553693 SFT2D1Q8WV19 159 aa1.33□□□□□ -2.2
SCFD1-210ENST00000553693 RHPN1-AS1Q9BWJ2 59 aa1.33□□□□□ -2.2
SCFD1-210ENST00000553693 BANF2Q9H503 90 aa1.33□□□□□ -2.2
SCFD1-210ENST00000553693 TMEM14BQ9NUH8 114 aa1.33□□□□□ -2.2
SCFD1-210ENST00000553693 SPANXCQ9NY87 97 aa1.33□□□□□ -2.2
SCFD1-210ENST00000553693 SMPXQ9UHP9 88 aa1.33□□□□□ -2.2
SCFD1-210ENST00000553693 KLK9Q9UKQ9 250 aa1.33□□□□□ -2.2
SCFD1-210ENST00000553693 PKHD1L1Q86WI1 4243 aa1.32□□□□□ -2.2
SCFD1-210ENST00000553693 TRAV5A0A0B4J249 113 aa1.32□□□□□ -2.2
SCFD1-210ENST00000553693 OR2T8A6NH00 312 aa1.32□□□□□ -2.2
SCFD1-210ENST00000553693 J3QLW9 94 aa1.32□□□□□ -2.2
SCFD1-210ENST00000553693 M0R378 163 aa1.32□□□□□ -2.2
SCFD1-210ENST00000553693 NDUFA4O00483 81 aa1.32□□□□□ -2.2
SCFD1-210ENST00000553693 LYRM1O43325 122 aa1.32□□□□□ -2.2
SCFD1-210ENST00000553693 HIST1H1BP16401 226 aaKnown RBP1.32□□□□□ -2.2
SCFD1-210ENST00000553693 ZNF93P35789 620 aaPredicted RBP1.32□□□□□ -2.2
SCFD1-210ENST00000553693 CCL18P55774 89 aa1.32□□□□□ -2.2
SCFD1-210ENST00000553693 KRTAP10-4P60372 401 aaPredicted RBP1.32□□□□□ -2.2
SCFD1-210ENST00000553693 RAB4BP61018 213 aa1.32□□□□□ -2.2
SCFD1-210ENST00000553693 SNRPGP62308 76 aaKnown RBP1.32□□□□□ -2.2
SCFD1-210ENST00000553693 TPRXLQ17RH7 258 aa1.32□□□□□ -2.2
SCFD1-210ENST00000553693 VMA21Q3ZAQ7 101 aa1.32□□□□□ -2.2
SCFD1-210ENST00000553693 TMEM78Q5T7P6 136 aa1.32□□□□□ -2.2
SCFD1-210ENST00000553693 C12orf73Q69YU5 71 aa1.32□□□□□ -2.2
SCFD1-210ENST00000553693 GLIPR1L1Q6UWM5 242 aa1.32□□□□□ -2.2
SCFD1-210ENST00000553693 TOMM20LQ6UXN7 152 aa1.32□□□□□ -2.2
SCFD1-210ENST00000553693 S100A13Q99584 98 aa1.32□□□□□ -2.2
SCFD1-210ENST00000553693 TMEM138Q9NPI0 162 aa1.32□□□□□ -2.2
SCFD1-210ENST00000553693 ABRACLQ9P1F3 81 aa1.32□□□□□ -2.2
SCFD1-210ENST00000553693 DNAH8Q96JB1 4490 aa1.31□□□□□ -2.2
SCFD1-210ENST00000553693 FSIP2Q5CZC0 6907 aa1.31□□□□□ -2.2
SCFD1-210ENST00000553693 A0A087WTM6 91 aa1.31□□□□□ -2.2
SCFD1-210ENST00000553693 A0A1W2PRE2 83 aa1.31□□□□□ -2.2
SCFD1-210ENST00000553693 GNGT2O14610 69 aa1.31□□□□□ -2.2
SCFD1-210ENST00000553693 HYPMO75409 117 aa1.31□□□□□ -2.2
SCFD1-210ENST00000553693 MT-ND6P03923 174 aa1.31□□□□□ -2.2
SCFD1-210ENST00000553693 SAA1P0DJI8 122 aaPredicted RBP1.31□□□□□ -2.2
SCFD1-210ENST00000553693 MT1HL1P0DM35 61 aa1.31□□□□□ -2.2
SCFD1-210ENST00000553693 BCL2P10415 239 aa1.31□□□□□ -2.2
SCFD1-210ENST00000553693 FABP2P12104 132 aa1.31□□□□□ -2.2
SCFD1-210ENST00000553693 RNASE4P34096 147 aaKnown RBP1.31□□□□□ -2.2
SCFD1-210ENST00000553693 RPL35P42766 123 aaKnown RBP1.31□□□□□ -2.2
SCFD1-210ENST00000553693 RAB5CP51148 216 aa1.31□□□□□ -2.2
SCFD1-210ENST00000553693 GTF2A1P52655 376 aaPredicted RBP1.31□□□□□ -2.2
SCFD1-210ENST00000553693 KRTAP12-1P59990 96 aa1.31□□□□□ -2.2
SCFD1-210ENST00000553693 LSM3P62310 102 aaKnown RBP1.31□□□□□ -2.2
SCFD1-210ENST00000553693 HBBP68871 147 aa1.31□□□□□ -2.2
SCFD1-210ENST00000553693 XAF1Q6GPH4 301 aa1.31□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 97.4 ms