RNA–Protein interactions for RNA: ENST00000553527.1

TDP1-205, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-205ENST00000553527 HIST1H2BCP62807 126 aa15.33■□□□□ 0.04
TDP1-205ENST00000553527 HIST2H2BEQ16778 126 aa15.33■□□□□ 0.04
TDP1-205ENST00000553527 HIST2H2BFQ5QNW6 126 aaPredicted RBP15.33■□□□□ 0.04
TDP1-205ENST00000553527 ERASQ7Z444 233 aa15.33■□□□□ 0.04
TDP1-205ENST00000553527 CHCHD10Q8WYQ3 142 aaPredicted RBP15.33■□□□□ 0.04
TDP1-205ENST00000553527 HIST1H2BHQ93079 126 aa15.33■□□□□ 0.04
TDP1-205ENST00000553527 HIST1H2BNQ99877 126 aa15.33■□□□□ 0.04
TDP1-205ENST00000553527 HIST1H2BMQ99879 126 aa15.33■□□□□ 0.04
TDP1-205ENST00000553527 A0A096LNJ9 63 aa15.32■□□□□ 0.04
TDP1-205ENST00000553527 TRAV13-1A0A0B4J241 112 aa15.32■□□□□ 0.04
TDP1-205ENST00000553527 hDV102S1A0JD36 115 aa15.32■□□□□ 0.04
TDP1-205ENST00000553527 HSBP1O75506 76 aa15.32■□□□□ 0.04
TDP1-205ENST00000553527 TEX43Q6ZNM6 134 aa15.32■□□□□ 0.04
TDP1-205ENST00000553527 Q6ZSA8 131 aa15.32■□□□□ 0.04
TDP1-205ENST00000553527 DNAH8Q96JB1 4490 aa15.31■□□□□ 0.04
TDP1-205ENST00000553527 FAM229AH3BQW9 127 aa15.31■□□□□ 0.04
TDP1-205ENST00000553527 SERF1AO75920 110 aa15.31■□□□□ 0.04
TDP1-205ENST00000553527 PAPPA-AS1Q5QFB9 102 aa15.31■□□□□ 0.04
TDP1-205ENST00000553527 C2orf88Q9BSF0 95 aa15.31■□□□□ 0.04
TDP1-205ENST00000553527 FAT1Q14517 4588 aa15.31■□□□□ 0.04
TDP1-205ENST00000553527 C1orf196B1AJZ1 125 aa15.3■□□□□ 0.04
TDP1-205ENST00000553527 CCL25O15444 150 aa15.3■□□□□ 0.04
TDP1-205ENST00000553527 XCL1P47992 114 aa15.3■□□□□ 0.04
TDP1-205ENST00000553527 VCX2Q9H322 139 aa15.3■□□□□ 0.04
TDP1-205ENST00000553527 LINC00310P59036 64 aa15.28■□□□□ 0.04
TDP1-205ENST00000553527 SCXQ7RTU7 201 aa15.28■□□□□ 0.04
TDP1-205ENST00000553527 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP15.27■□□□□ 0.04
TDP1-205ENST00000553527 PDZD11Q5EBL8 140 aa15.27■□□□□ 0.04
TDP1-205ENST00000553527 ZC2HC1BQ5TFG8 222 aa15.27■□□□□ 0.04
TDP1-205ENST00000553527 AMELXQ99217 191 aa15.27■□□□□ 0.04
TDP1-205ENST00000553527 LINC00173Q6ZV60 143 aa15.26■□□□□ 0.03
TDP1-205ENST00000553527 C9orf163Q8N9P6 203 aa15.26■□□□□ 0.03
TDP1-205ENST00000553527 INAFM2P0DMQ5 153 aa15.25■□□□□ 0.03
TDP1-205ENST00000553527 FOXI1Q12951 378 aa15.25■□□□□ 0.03
TDP1-205ENST00000553527 CD164L2Q6UWJ8 174 aa15.25■□□□□ 0.03
TDP1-205ENST00000553527 FAM19A2Q8N3H0 131 aa15.25■□□□□ 0.03
TDP1-205ENST00000553527 CHAC1Q9BUX1 264 aa15.25■□□□□ 0.03
TDP1-205ENST00000553527 ATP5LO75964 103 aa15.24■□□□□ 0.03
TDP1-205ENST00000553527 HIGD2BQ4VC39 106 aa15.24■□□□□ 0.03
TDP1-205ENST00000553527 CFAP161Q6P656 301 aa15.24■□□□□ 0.03
TDP1-205ENST00000553527 UBE2D1P51668 147 aa15.23■□□□□ 0.03
TDP1-205ENST00000553527 C15orf56Q8N910 161 aa15.23■□□□□ 0.03
TDP1-205ENST00000553527 NUPR1O60356 82 aa15.22■□□□□ 0.03
TDP1-205ENST00000553527 SLPIP03973 132 aa15.22■□□□□ 0.03
TDP1-205ENST00000553527 LINC00528Q8N1L1 170 aa15.22■□□□□ 0.03
TDP1-205ENST00000553527 CIRBP-AS1Q8TBR5 109 aa15.22■□□□□ 0.03
TDP1-205ENST00000553527 PMVKQ15126 192 aa15.2■□□□□ 0.02
TDP1-205ENST00000553527 TRAV16A0A0A6YYK6 109 aaPredicted RBP15.19■□□□□ 0.02
TDP1-205ENST00000553527 COX7A2LO14548 114 aa15.19■□□□□ 0.02
TDP1-205ENST00000553527 NDUFA6P56556 154 aa15.19■□□□□ 0.02
TDP1-205ENST00000553527 CNBPP62633 177 aaKnown RBP15.19■□□□□ 0.02
TDP1-205ENST00000553527 LINC00242Q5T6M2 205 aa15.19■□□□□ 0.02
TDP1-205ENST00000553527 SDIM1Q6ZPB5 146 aa15.18■□□□□ 0.02
TDP1-205ENST00000553527 CST9LQ9H4G1 147 aa15.18■□□□□ 0.02
TDP1-205ENST00000553527 SRRM2Q9UQ35 2752 aaKnown RBP15.17■□□□□ 0.02
TDP1-205ENST00000553527 LEPROTL1O95214 131 aa15.17■□□□□ 0.02
TDP1-205ENST00000553527 MALP21145 153 aa15.17■□□□□ 0.02
TDP1-205ENST00000553527 IFI27L1Q96BM0 104 aa15.17■□□□□ 0.02
TDP1-205ENST00000553527 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP15.17■□□□□ 0.02
TDP1-205ENST00000553527 IGHV3-64A0A075B6Q5 118 aa15.16■□□□□ 0.02
TDP1-205ENST00000553527 SEC11AP67812 179 aa15.16■□□□□ 0.02
TDP1-205ENST00000553527 COA6Q5JTJ3 125 aaKnown RBP15.16■□□□□ 0.02
TDP1-205ENST00000553527 FAM19A3Q7Z5A8 133 aa15.16■□□□□ 0.02
TDP1-205ENST00000553527 C5orf38Q86SI9 138 aa15.16■□□□□ 0.02
TDP1-205ENST00000553527 DPH3Q96FX2 82 aa15.16■□□□□ 0.02
TDP1-205ENST00000553527 IGHV3OR16-9A0A0B4J2B5 98 aa15.15■□□□□ 0.02
TDP1-205ENST00000553527 PLA2G1BP04054 148 aaKnown RBP15.15■□□□□ 0.02
TDP1-205ENST00000553527 HSPB8Q9UJY1 196 aa15.15■□□□□ 0.02
TDP1-205ENST00000553527 IGHV1-58A0A0C4DH39 117 aa15.14■□□□□ 0.01
TDP1-205ENST00000553527 A0A0J9YXV3 536 aa15.14■□□□□ 0.01
TDP1-205ENST00000553527 PANO1I0J062 215 aa15.14■□□□□ 0.01
TDP1-205ENST00000553527 HERVK_113P63121 156 aa15.14■□□□□ 0.01
TDP1-205ENST00000553527 COX6A2Q02221 97 aa15.14■□□□□ 0.01
TDP1-205ENST00000553527 LINC00526Q96FQ7 95 aa15.14■□□□□ 0.01
TDP1-205ENST00000553527 GEMIN7Q9H840 131 aaKnown RBP15.14■□□□□ 0.01
TDP1-205ENST00000553527 VPS13BQ7Z7G8 4022 aa15.14■□□□□ 0.01
TDP1-205ENST00000553527 FABP4P15090 132 aa15.13■□□□□ 0.01
TDP1-205ENST00000553527 GVQW2A0A096LPI5 108 aaPredicted RBP15.12■□□□□ 0.01
TDP1-205ENST00000553527 TINCRA0A1B0GVN0 87 aa15.11■□□□□ 0.01
TDP1-205ENST00000553527 APOMO95445 188 aa15.11■□□□□ 0.01
TDP1-205ENST00000553527 A0A087WZ39 114 aa15.1■□□□□ 0.01
TDP1-205ENST00000553527 CHTF8P0CG12 524 aa15.1■□□□□ 0.01
TDP1-205ENST00000553527 TRAV12-1A0A0B4J245 112 aa15.09■□□□□ 0.01
TDP1-205ENST00000553527 LINC00469Q8N7U9 141 aa15.09■□□□□ 0.01
TDP1-205ENST00000553527 H0Y8G0 127 aa15.08■□□□□ 0
TDP1-205ENST00000553527 IGLC3P0DOY3 106 aa15.08■□□□□ 0
TDP1-205ENST00000553527 PACRGQ96M98 296 aaPredicted RBP15.08■□□□□ 0
TDP1-205ENST00000553527 CHTOPQ9Y3Y2 248 aaKnown RBP15.08■□□□□ 0
TDP1-205ENST00000553527 FLG2Q5D862 2391 aaPredicted RBP15.07■□□□□ 0
TDP1-205ENST00000553527 ZNF561-AS1K7EIQ3 104 aa15.07■□□□□ 0
TDP1-205ENST00000553527 CDKN2A-AS1Q9UH64 79 aa15.07■□□□□ 0
TDP1-205ENST00000553527 IGLV4-69A0A075B6H9 119 aa15.06■□□□□ 0
TDP1-205ENST00000553527 S100A6P06703 90 aa15.06■□□□□ 0
TDP1-205ENST00000553527 LINC01561Q8N1V8 128 aa15.06■□□□□ 0
TDP1-205ENST00000553527 ORAOV1Q8WV07 137 aa15.06■□□□□ 0
TDP1-205ENST00000553527 IGLV5-45A0A087WSX0 123 aa15.05■□□□□ -0
TDP1-205ENST00000553527 SPAG11BQ08648 103 aa15.05■□□□□ -0
TDP1-205ENST00000553527 OR10D4PQ8NGN7 298 aa15.05■□□□□ -0
TDP1-205ENST00000553527 MAP1LC3CQ9BXW4 147 aa15.05■□□□□ -0
TDP1-205ENST00000553527 IGKV2-24A0A0C4DH68 120 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms