RNA–Protein interactions for RNA: ENST00000553447.6

PSEN1-206, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 572 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-206ENST00000553447 PCP2Q8IVA1 136 aa11.92□□□□□ -0.5
PSEN1-206ENST00000553447 LEPROTO15243 131 aa11.91□□□□□ -0.5
PSEN1-206ENST00000553447 SPINK8P0C7L1 97 aa11.91□□□□□ -0.5
PSEN1-206ENST00000553447 DDTP30046 118 aa11.91□□□□□ -0.5
PSEN1-206ENST00000553447 ENHOQ6UWT2 76 aa11.91□□□□□ -0.5
PSEN1-206ENST00000553447 BOD1L2Q8IYS8 172 aa11.91□□□□□ -0.5
PSEN1-206ENST00000553447 TP73-AS1Q9UF72 201 aa11.91□□□□□ -0.5
PSEN1-206ENST00000553447 IGHV3-64A0A075B6Q5 118 aa11.9□□□□□ -0.5
PSEN1-206ENST00000553447 IGHV1-58A0A0C4DH39 117 aa11.9□□□□□ -0.5
PSEN1-206ENST00000553447 SIVA1O15304 175 aa11.9□□□□□ -0.5
PSEN1-206ENST00000553447 DLEU1O43261 78 aa11.9□□□□□ -0.5
PSEN1-206ENST00000553447 CRPP02741 224 aa11.9□□□□□ -0.5
PSEN1-206ENST00000553447 TTTY13Q9BZ97 58 aa11.9□□□□□ -0.5
PSEN1-206ENST00000553447 TRAV8-3A0A0A6YYJ7 113 aa11.89□□□□□ -0.51
PSEN1-206ENST00000553447 IGHV3OR16-9A0A0B4J2B5 98 aa11.89□□□□□ -0.51
PSEN1-206ENST00000553447 XCL1P47992 114 aa11.89□□□□□ -0.51
PSEN1-206ENST00000553447 CHCHD10Q8WYQ3 142 aaPredicted RBP11.89□□□□□ -0.51
PSEN1-206ENST00000553447 PLEKHB2Q96CS7 222 aa11.89□□□□□ -0.51
PSEN1-206ENST00000553447 SMIM1B2RUZ4 78 aa11.88□□□□□ -0.51
PSEN1-206ENST00000553447 TSPEAR-AS2P59090 65 aa11.88□□□□□ -0.51
PSEN1-206ENST00000553447 MAPKAPK5-AS1Q8N8E1 139 aa11.88□□□□□ -0.51
PSEN1-206ENST00000553447 UBE2WQ96B02 151 aa11.88□□□□□ -0.51
PSEN1-206ENST00000553447 IGLV10-54A0A075B6I4 117 aa11.87□□□□□ -0.51
PSEN1-206ENST00000553447 A0A087WZ39 114 aa11.87□□□□□ -0.51
PSEN1-206ENST00000553447 J3QQQ9 107 aa11.87□□□□□ -0.51
PSEN1-206ENST00000553447 ZFAND6Q6FIF0 208 aa11.87□□□□□ -0.51
PSEN1-206ENST00000553447 CD164L2Q6UWJ8 174 aa11.87□□□□□ -0.51
PSEN1-206ENST00000553447 UBE2DNLQ8IWF7 75 aa11.87□□□□□ -0.51
PSEN1-206ENST00000553447 DNAH7Q8WXX0 4024 aa11.87□□□□□ -0.51
PSEN1-206ENST00000553447 TRAV8-4A0A0B4J246 113 aa11.86□□□□□ -0.51
PSEN1-206ENST00000553447 IGLV5-39A0A0G2JS06 123 aa11.86□□□□□ -0.51
PSEN1-206ENST00000553447 LGALS3P17931 250 aaKnown RBP11.86□□□□□ -0.51
PSEN1-206ENST00000553447 HNRNPA3P51991 378 aaKnown RBP11.86□□□□□ -0.51
PSEN1-206ENST00000553447 MIAQ16674 131 aa11.86□□□□□ -0.51
PSEN1-206ENST00000553447 C5orf38Q86SI9 138 aa11.86□□□□□ -0.51
PSEN1-206ENST00000553447 MYMXA0A1B0GTQ4 84 aa11.85□□□□□ -0.51
PSEN1-206ENST00000553447 MUC7Q8TAX7 377 aa11.85□□□□□ -0.51
PSEN1-206ENST00000553447 FBN3Q75N90 2809 aa11.84□□□□□ -0.51
PSEN1-206ENST00000553447 ZNF815PA8K554 130 aa11.84□□□□□ -0.51
PSEN1-206ENST00000553447 FOXI1Q12951 378 aa11.84□□□□□ -0.51
PSEN1-206ENST00000553447 LINC01561Q8N1V8 128 aa11.84□□□□□ -0.51
PSEN1-206ENST00000553447 Q9H8V8 135 aa11.84□□□□□ -0.51
PSEN1-206ENST00000553447 GAGE12HA6NDE8 117 aa11.83□□□□□ -0.52
PSEN1-206ENST00000553447 C2orf91Q6ZV80 131 aa11.83□□□□□ -0.52
PSEN1-206ENST00000553447 WWC2-AS2Q96NR7 200 aa11.83□□□□□ -0.52
PSEN1-206ENST00000553447 LINC00587B1AMM8 73 aa11.82□□□□□ -0.52
PSEN1-206ENST00000553447 COX7A2LO14548 114 aa11.82□□□□□ -0.52
PSEN1-206ENST00000553447 C10orf126Q8N4M7 172 aa11.82□□□□□ -0.52
PSEN1-206ENST00000553447 IBA57-AS1B1ANH7 110 aa11.81□□□□□ -0.52
PSEN1-206ENST00000553447 KRTAP26-1Q6PEX3 210 aa11.8□□□□□ -0.52
PSEN1-206ENST00000553447 CSMD3Q7Z407 3707 aa11.79□□□□□ -0.52
PSEN1-206ENST00000553447 K7EP13 123 aa11.79□□□□□ -0.52
PSEN1-206ENST00000553447 CTAG1AP78358 180 aa11.79□□□□□ -0.52
PSEN1-206ENST00000553447 COX7B2Q8TF08 81 aa11.79□□□□□ -0.52
PSEN1-206ENST00000553447 C1orf43Q9BWL3 253 aa11.79□□□□□ -0.52
PSEN1-206ENST00000553447 HIGD1BQ9P298 99 aa11.79□□□□□ -0.52
PSEN1-206ENST00000553447 NDUFA12Q9UI09 145 aa11.79□□□□□ -0.52
PSEN1-206ENST00000553447 MALP21145 153 aa11.78□□□□□ -0.52
PSEN1-206ENST00000553447 STARD9Q9P2P6 4700 aa11.77□□□□□ -0.53
PSEN1-206ENST00000553447 NDUFA1O15239 70 aa11.77□□□□□ -0.53
PSEN1-206ENST00000553447 Q9HAA7 133 aa11.77□□□□□ -0.53
PSEN1-206ENST00000553447 TOMM7Q9P0U1 55 aa11.77□□□□□ -0.53
PSEN1-206ENST00000553447 PLECQ15149 4684 aaKnown RBP11.76□□□□□ -0.53
PSEN1-206ENST00000553447 IGKV2D-24A0A075B6R9 120 aa11.76□□□□□ -0.53
PSEN1-206ENST00000553447 SCGB1D4Q6XE38 83 aa11.76□□□□□ -0.53
PSEN1-206ENST00000553447 APOMO95445 188 aa11.75□□□□□ -0.53
PSEN1-206ENST00000553447 Q8IZM0 81 aa11.75□□□□□ -0.53
PSEN1-206ENST00000553447 ORAOV1Q8WV07 137 aa11.75□□□□□ -0.53
PSEN1-206ENST00000553447 A0A0J9YXY3 114 aa11.74□□□□□ -0.53
PSEN1-206ENST00000553447 RMI2Q96E14 147 aa11.74□□□□□ -0.53
PSEN1-206ENST00000553447 ZNF625Q96I27 306 aaPredicted RBP11.74□□□□□ -0.53
PSEN1-206ENST00000553447 KRTAP1-5Q9BYS1 174 aa11.74□□□□□ -0.53
PSEN1-206ENST00000553447 PRSS2P07478 247 aa11.73□□□□□ -0.53
PSEN1-206ENST00000553447 HSD52Q0P140 79 aa11.72□□□□□ -0.53
PSEN1-206ENST00000553447 HERV-K104P63124 156 aa11.71□□□□□ -0.53
PSEN1-206ENST00000553447 KIAA0087Q14695 138 aa11.71□□□□□ -0.53
PSEN1-206ENST00000553447 C6orf226Q5I0X4 101 aa11.71□□□□□ -0.53
PSEN1-206ENST00000553447 SPAG11BQ08648 103 aa11.7□□□□□ -0.54
PSEN1-206ENST00000553447 TTC32Q5I0X7 151 aa11.7□□□□□ -0.54
PSEN1-206ENST00000553447 CASC10Q5T4H9 136 aa11.7□□□□□ -0.54
PSEN1-206ENST00000553447 CFAP161Q6P656 301 aa11.7□□□□□ -0.54
PSEN1-206ENST00000553447 SFTA2Q6UW10 78 aa11.7□□□□□ -0.54
PSEN1-206ENST00000553447 NBDYA0A0U1RRE5 68 aa11.69□□□□□ -0.54
PSEN1-206ENST00000553447 C3orf84H3BNL1 204 aa11.69□□□□□ -0.54
PSEN1-206ENST00000553447 TAL2Q16559 108 aa11.69□□□□□ -0.54
PSEN1-206ENST00000553447 SPANXB1Q9NS25 103 aaPredicted RBP11.69□□□□□ -0.54
PSEN1-206ENST00000553447 DNAH1Q9P2D7 4330 aa11.69□□□□□ -0.54
PSEN1-206ENST00000553447 TMEM238C9JI98 176 aa11.68□□□□□ -0.54
PSEN1-206ENST00000553447 M0R143 59 aa11.68□□□□□ -0.54
PSEN1-206ENST00000553447 TIMM17BO60830 172 aa11.68□□□□□ -0.54
PSEN1-206ENST00000553447 CXCL5P42830 114 aa11.68□□□□□ -0.54
PSEN1-206ENST00000553447 HINT1P49773 126 aaPredicted RBP11.68□□□□□ -0.54
PSEN1-206ENST00000553447 HIST1H4GQ99525 98 aa11.68□□□□□ -0.54
PSEN1-206ENST00000553447 SNHG12Q9BXW3 62 aa11.68□□□□□ -0.54
PSEN1-206ENST00000553447 EREGO14944 169 aa11.67□□□□□ -0.54
PSEN1-206ENST00000553447 CKS1BP61024 79 aa11.67□□□□□ -0.54
PSEN1-206ENST00000553447 C15orf56Q8N910 161 aa11.67□□□□□ -0.54
PSEN1-206ENST00000553447 LITAFQ99732 161 aa11.67□□□□□ -0.54
PSEN1-206ENST00000553447 COX11Q9Y6N1 276 aa11.67□□□□□ -0.54
PSEN1-206ENST00000553447 MEIG1Q5JSS6 88 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 147.5 ms